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1/2006 - Potravinárstvo

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TThe<br />

PCR pproducts<br />

werre<br />

digested<br />

eendonuclease<br />

RRsa<br />

I (Segenetic)<br />

in the to<br />

µ µl at 37 ºC ovvernight<br />

accoording<br />

to the<br />

innstructions.<br />

TThe<br />

productss<br />

of restrictio<br />

separated<br />

eleectrophoreticcally<br />

on 4<br />

(MMerck)<br />

and were docummented<br />

by D<br />

(BBioRad).<br />

Inn<br />

the case oof<br />

presence oof<br />

allele A, w<br />

ddetection<br />

of aallele<br />

C as a subtype of<br />

wwas<br />

used thee<br />

method off<br />

RFLP-PCR<br />

ccomposition<br />

of reaction mixture as<br />

ddetection<br />

off<br />

alleles A and B,<br />

eexchange(figuure<br />

1). The pprimers<br />

used<br />

aallele<br />

C were:<br />

fo forward primer:<br />

(5'- TCAGGACCCCG<br />

AAAC-3')<br />

reverse<br />

primeer:<br />

( 5'- CCTTCCAGCTG<br />

AAAG-3')<br />

TThe<br />

temperature<br />

profile of the PC<br />

stated<br />

the samme,<br />

besides tthe<br />

temperatu<br />

thhat<br />

was maiintained<br />

at 663<br />

ºC. PCR<br />

ddigested<br />

by restriction eendonuclease<br />

tootal<br />

volume of 20 µl at 337<br />

ºC overni<br />

thhe<br />

manufactuurer’s<br />

instruuctions<br />

and s<br />

aagarose<br />

gel.<br />

FFrom<br />

the obbtained<br />

results,<br />

the freq<br />

ggenotype<br />

annd<br />

allelic ppresence<br />

w<br />

FFrequency<br />

hoomogeneity<br />

iin<br />

the individ<br />

ppopulations<br />

wwas<br />

evaluateed<br />

with χ<br />

FFalconer<br />

et MMackay<br />

(1996)<br />

SStatistical<br />

annalysis<br />

were<br />

SSTATISTICA<br />

6.0 (StatS<br />

aalgorithms,<br />

whhich<br />

are avai<br />

mmilk<br />

protein ccomposition<br />

w<br />

thhe<br />

least squaares<br />

method G<br />

2<br />

with restricction<br />

otal volume oof<br />

20<br />

e manufacturrer’s<br />

on analysis wwere<br />

% agarose gel<br />

DigiDoc Sysstem<br />

we have madde<br />

a<br />

f allele A. Thhere<br />

R with the same<br />

in the casee<br />

of<br />

with primmers<br />

for detection<br />

of<br />

GGAGGTGGGAC<br />

GGTCGGGTTTG<br />

R analysis was<br />

ure of anneaaling<br />

fragments wwere<br />

e Msp I in the<br />

ght accordinng<br />

to<br />

separated in 4 %<br />

quencies of the<br />

were calculaated.<br />

dually examiined<br />

test accordinng<br />

to<br />

).<br />

e carried oout<br />

in proggram<br />

Soft, Inc. PPL,<br />

2001) used<br />

ilable on requuest.<br />

The dataa<br />

on<br />

were analysedd<br />

statistically with<br />

GLM (Generaal<br />

Linear Model),<br />

TTable<br />

1: Distrribution<br />

of β-Lg<br />

genotypess<br />

and gene frrequencies<br />

in Improved Vaalachian,<br />

Cziggaia<br />

and East-Friesian<br />

sheeep<br />

bbreeds.<br />

Allele<br />

Genoty ypic frequeencies<br />

fr requency<br />

bbreed<br />

n AA AB BB χ22<br />

test A B<br />

obs. 22 34 19<br />

IImproved<br />

VValachian<br />

sheep 75 exp. 20.28 37.44 17.28 0. .633 0.5 52 0.48<br />

nn=number<br />

of ssamples,<br />

χ2 teest=chi-squareed<br />

value, obs. =observed fre equencies, expp.=expected<br />

ffrequencies<br />

ca alculated on thhe<br />

bbasis<br />

of Hardyy-Weinberg<br />

laww<br />

TThe<br />

genotypicc<br />

frequencies at the β-Lg loocus<br />

estimated<br />

by<br />

RRFLP-PCR,<br />

ddetected<br />

for thhe<br />

Improved Valachian shheep<br />

wwere<br />

0.29 (AAA);<br />

0.45 (AB) ); 0.26 (BB). In our study,<br />

the<br />

vvariant<br />

A of ββ-Lg<br />

was moore<br />

frequent in the exammined<br />

ppopulation<br />

of sheep breed tthan<br />

variant BB.<br />

It corresponnded<br />

wwith<br />

the findinngs<br />

of severaal<br />

authors tessting<br />

the diffeerent<br />

oovine<br />

breeds aas<br />

Altamuranaa<br />

(Dario et all.,<br />

2005), Masssese<br />

(RRampolli<br />

et al.,1997), Litthuanian<br />

Natiive<br />

Coarsewoooled<br />

aand<br />

Lithuaniaan<br />

Blackface sheep (Kuččinskiene<br />

et al.,<br />

22005),<br />

Hungarrian<br />

merino ett<br />

British milkk<br />

sheep (Antoon<br />

et<br />

aal.,<br />

1997), Maanchega<br />

breedd<br />

(Lopez-Gallvez<br />

et al., 1994)<br />

aand<br />

the majority<br />

of studied oovine<br />

breeds.<br />

ročník 4<br />

Pootravinárst<br />

tvo<br />

60<br />

taki ing into accouunt<br />

the effects<br />

of genotype es of ß-LG annd<br />

sam mpling. The ddifferences<br />

weere<br />

tested by y using Schefffe<br />

mul ltiple range teest,<br />

LSD test aand<br />

Student te est for all traiits<br />

stud died.<br />

M – 25 bp markeer,<br />

1 – AA geenotype,<br />

2 – AB A genotype, 3<br />

– BB<br />

genotype, 4 – PCR prodduct.<br />

Figure<br />

1: The rrepresentativee<br />

results of the t RFLP-PCCR<br />

anal lysis.<br />

RE ESULTS ANND<br />

DISCUSSSION<br />

We estimated thhe<br />

distributionn<br />

of β-Lg ge enotypes in thhe<br />

pop pulation of thee<br />

Slovak sheepp<br />

breed Impro oved Valachiaan.<br />

The e alleles A annd<br />

B were preesent<br />

in exam mined breed, oon<br />

the contrary, alllele<br />

C was nnot<br />

found. The T allelic annd<br />

gen notypic frequeencies<br />

in the exon 2 of β-Lg gene aare<br />

show wn in table 1.<br />

In the t tested bre<br />

diff ference in χ<br />

obs<br />

dist<br />

con<br />

equ<br />

The<br />

sign<br />

dist<br />

only<br />

case<br />

vs<br />

usin<br />

2<br />

eed, there wass<br />

found out th he insignificaant<br />

2<br />

test calculaated<br />

between expected annd<br />

erved genotyype<br />

frequenciies.<br />

Accordin ng to an ideeal<br />

tribution of thhe<br />

genotypes in the popu ulation, we caan<br />

nfirm that thhe<br />

populationn<br />

was in Hardy-Weinber<br />

H<br />

rg<br />

uilibrium.<br />

e Improved VValachian<br />

sheeep<br />

showed no statistically<br />

nificant effectt<br />

of the geneetic<br />

variant fo or the nitrogeen<br />

tribution in thhe<br />

proteins (taable<br />

2). We have h found thhe<br />

y statistical ddifference<br />

(P<

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