Special topic: Metagenomics - Genome Sciences

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Sequence space vs. 3d-fold space Many proteins with different sequences fold into similar 3d-shapes: leghemoglobin (yellow lupin) and myoglobin (seal) share only 21.9% sequence identity.
A few words on Craig Venter…
Page 1 and 2: MetaGenomics Carlos Araya | 2.6.08
Page 3 and 4: What is metagenomics? (and why now?
Page 5 and 6: 16s rRNA: Molecular clocks & evolut
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Page 9 and 10: percent similarity 50 100 Bible: Fr
Page 11 and 12: Yooseph et al., 2007
Page 13 and 14: Ocean’s diversity landscape is fa
Page 15 and 16: How much sequencing does it take? #
Page 17 and 18: # reads required fraction covered
Page 19 and 20: Sequencing of entire BAC insert Gen
Page 21 and 22: Gene prediction: Clustering ≥3 fi
Page 23 and 24: Sorcerer II: What Gentle lysis, did
Page 25 and 26: grouping shows that our current GOS
Page 27 and 28: Sargasso Sea North Atlantic Coast 1
Page 29: and phosphatases protein kinases se
Page 33 and 34: of this yloonnearrmiinoare S1. ject
Page 35 and 36: “The best-laid plans of mice & me
Page 37 and 38: Computational: ‣ Genome assembly
Page 39 and 40: Biocatalysis Bio-catalysis: Greener
Page 41 and 42: TTG-8 [2] TTG-9 [5] TTG-10 [39] Bio
Page 44 and 45: Woese, 1987

Special topic: Metagenomics - Genome Sciences

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