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Special topic: Metagenomics - Genome Sciences

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and phosphatases protein kinases serve andas phosphatases antagonistic serve by the as human antagonistic protein phosp by t<br />

Living with UV-damage: Photolyases & UVDE<br />

ring of Sequences Table 10. in Clustering Familiesof That Sequences Are Explored in Families in ThisThat andAre Companion ExploredPapers in This<br />

ProteinCluster FamilyID Nonredundant Cluster Sequences ID Nonredundant Total Sequences Sequences NCBI-n<br />

RecA 1146 2,897 1146 2,8977,423<br />

1,683<br />

UVDE 6239 417 6239 417 484 38<br />

Photolyase 411 1,387 411 1,3872,261<br />

19<br />

1285 5,907 1285 5,9079,796<br />

302<br />

3077 319 3077 319 482 149<br />

3454 67 3454 67 73 1<br />

Spore lyase 5283 237 5283 237 331 39<br />

PP2C phosphatase 78 2,917 78 2,9173,933<br />

762<br />

3673 62 3673 62 106<br />

GOS data provides<br />

9118<br />

a 10x increase<br />

68<br />

in diversity of<br />

9118<br />

proteins involved<br />

68<br />

in<br />

73<br />

UV-damage repair:<br />

39<br />

0<br />

‣ 7,680 photolyase 11012181 proteins 36 (four clusters). 11012181 36 69<br />

11021747 19 11021747 19 72<br />

‣ 417 UV-dimer 11066319endonucleases 19 (related 11066319 to uvrA, uvrB, uvrC; 19many<br />

38 viral).<br />

34<br />

13<br />

14<br />

(type I, II, Glutamine III) synthetase 3709 (type 4,284 I, II, III) 3709 4,28411,322<br />

1,504<br />

3072 159 3072 159 192 46<br />

4547 30 4547 30 32 1<br />

it) RuBisCO (large 3734 subunit) 1,979 3734 1,97914,149<br />

13,532

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