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The Structural Analysis of Large Noncovalent Oxygen Binding Proteins Current Protein and Peptide Science, 2008, Vol. 9, No. 2 159 Table 1. Experimental Subunit Masses, Native Masses, Calculated Masses and Architectural Features of Annelid HBL-Hbs Species Clitellata Hirudinida Erpobdellidae Nephelopsis oscura Number and type of subunits a Subunit Composition Dodecamer Mass Native Mass Expl mass (Da) ±s.d. Subunits from covalent complexes b Expl mass (Da) ±s.d. Expl mass (Da) ±s.d. [reference] Cltd mass (model) Expl mass (kDa) ±s.d. Method c [reference] Calculated Mass (kDa) 144G + 36L model [reference] 3D Structure type I/II p and central piece [reference] 3 MG 16534.5 ±1 208670 ±40 208330 nd 3398 nd 17170.5 ±1 6M + 3D [144] (Hb) 17314.7 ±1 [144] ESI-MS data 2 DG 32949.5 ±3 3 G < DG 16321.8 ±1 33125.4 ±3 16498.6 ±1 16632.4 ±1 5 ML 24512.3 ±2 24585.5 ±2 24978.9 ±2 25005.8 ±2 25565.8 ±2 [144] Haemopidae Haemopis grandis 4 MG 16634,1 ±0,5 207550 ±191 207437 3710 d SE 3361 nd 17013,4 ±0,5 6M + 3D [146] [32] (Hb) 17592,9 ±0,5 [63] ESI-MS data 17573,3 ±0,8 2 DG 32501,1 ±0,7 3 G < DG 16100,4 ±0,5 32629,6 ±0,8 16405,8 ±0,4 16705,2 ±0,5 3 ML 24004,2 ±0,4 24449,2 ±1,1 24548,9 ±0,6 [145] Hirudinidae Macrobdella decora 2 MG 16770,1 ±0,2 206528 ±16 206371 3560 ±160 STEM 3357 e type I 16841,9 ±0,5 6M + 3D [147] toroid (Hb) 3 DG 32586 ±1,1 4 G < DG 16052,2 ±0,5 [63] 3804 ±70 MALLS [149] 32714,5 ±0,8 16537,3 ±0,6 [148] 32842,9 ±1,3 16666,7 ±1 16792,9 ±0,6 3 ML 24340,1 ±0,7 24398,6 ±0,3 24420 ±0,4 [82] Oligochaeta Glossoscolecidae Glossoscolex paulistus 4 MG 16372 ±18 212833,5 e 3100 SV 3500 e 16447 ±19 3M + 3T [151] (Hb) 16613 ±7 3200 SAXS 16750 ±70 [152] 1 DG 32520 f 1 TG 51933 3 G < TG 16492 ±24 17363 ±17 18258 ±30 3 ML 25817 ±50 26761 ±16 34130 g [150] Lumbricidae Lumbricus terrestris 3 MG 15992,4 ±1 213593 ±203 213436 3560 ±130 STEM 3531 type I 15978 ±1 3M + 3T [23] [23] toroid (Hb) 15962,1 ±1 [63] 3410-3660 SE ESI-MS data [153] 4 TG 52922,6 6 G < TG 16254,4 ±1 [23] 3516 ±16 52760 17289,2 ±1 3755 ±80 MALLS [32] 52598,5 19389,9 ±1 h [148] statistical model 3 ML 27607 i 52435,4 19227,4 ±1 h 4100 ±100 MALLS 32104,3 ±5 24912,9 ±2 24090 j [23] 19065,3 ±1 h [22] 19065,3 ±2 h 80
160 Current Protein and Peptide Science, 2008, Vol. 9, No. 2 Bruneaux et al. (Table 1) contd…. Species Number and type of subunits a Subunit Composition Dodecamer Mass Native Mass Expl mass (Da) ±s.d. Subunits from covalent complexes b Expl mass (Da) ±s.d. Expl mass (Da) ±s.d. Cltd mass (model) Expl mass (kDa) ±s.d. Method c [reference] Calculated Mass (kDa) 144G + 36L model [reference] Tubificidae Tubifex tubifex ? MG 15810,7 205817 ±64 204734 3010 SE 3368 ? TG 49968,1 3M + 3T [154] [32] (Hb) [63] [63] 3630 LS ESI-MS data [155] 3090 ±150 SAXS [156] 3D Structure type I/II p and central piece [reference] Polychaeta Palpata Alvinellidae Alvinella caudata 3 MG 16163,2 ±1 3517 ±14 MALLS 3401 k 16203,2 ±1 [87] (Hb) 16531,8 ±1 TG 51133,9 ±4 3 G < TG 16148 ±1 16929,8 ±1 18064,7 ±1 3 ML 23025,2 ±2 24368,2 ±2 26362,2 ±2 [87] Alvinella pompejana 4 MG 16348,9 ±1 211739 ±227 211733 3833 ±14 MALLS 3428 k type II 16419,6 ±1 3M + 3T [88] [157] toroid (Hb) 16532,4 ±1 [63] [158] 16633,4 ±1 TG 51431,9 ±4 3 G < TG 16477,5 ±1 16916,1 ±1 18048,8 ±1 4 ML 22887,1 ±2 24230,5 ±2 26233,6 ±2 25974,4 ±2 l [88] Paralvinella 4 MG 16616,8 ±1 3750 ±150 MALLS 3482 k palmiformis 16660,5 ±1 [87] (Hb) 16745,9 ±1 16790,1 ±1 TG 50983,2 ±4 3 G < TG 16247,6 ±1 16723,9 ±1 18020,2 ±1 1 ML 26598,8 ±2 [87] Paralvinella 2 MG 16685,1 ±1 3822 ±28 MALLS 3426 k grasslei 16814,1 ±1 [87] (Hb) TG 51059,2 ±4 3 G < TG 16247,8 ±1 16754,5 ±1 18064,5 ±1 4 ML 24303,7 ±2 24334,8 ±2 24349,8 ±2 26565,7 ±2 [87] Eunicidae Marphysa sp. 3609 ±60 MALLS 3370 (Hb) [148] [32] ESI-MS data Nereididae Tylorrhynchus 1 MG 15575,4 ±1 203953 ±209 204329 3370 SE 3422 heterochaetus 1 TG 50068,4 ±4 3 G < TG 16601,9 ±1 3M + 3T [159] [32] (Hb) 16680,4 ±1 [63] ESI-MS data 16794 ±1 3 ML 23233,8 ±2 24835,4 ±3 81
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THESE DE DOCTORAT DE L’UNIVERSITE
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i Résumé / Abstract Réponse adap
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iv SOMMAIRE 4.2 Objectifs de l’é
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2 CHAPITRE 1. INTRODUCTION Les éco
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4 CHAPITRE 1. INTRODUCTION 1.1 Mili
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6 CHAPITRE 1. INTRODUCTION Les prin
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8 CHAPITRE 1. INTRODUCTION TAB. 1.1
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10 CHAPITRE 1. INTRODUCTION et cycl
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FIG. 1.5 - Localisation des princip
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(a) FIG. 1.6 - Fonctionnement d’u
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16 CHAPITRE 1. INTRODUCTION TAB. 1.
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18 CHAPITRE 1. INTRODUCTION FIG. 1.
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20 CHAPITRE 1. INTRODUCTION Différ
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22 CHAPITRE 1. INTRODUCTION FIG. 1.
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24 CHAPITRE 1. INTRODUCTION le mili
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26 CHAPITRE 1. INTRODUCTION Capacit
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28 CHAPITRE 1. INTRODUCTION TAB. 1.
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130 CHAPITRE 3. STRUCTURE DE L’HC
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132 CHAPITRE 3. STRUCTURE DE L’HC
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134 CHAPITRE 4. PLASTICITÉ PHÉNOT
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Dénaturant Natif
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172 CHAPITRE 5. ADAPTATIONS RESPIRA
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216 CHAPITRE 6. CONCLUSION ET PERSP
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Annexe A Détermination des masses
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229 10000 h280 .M h) h280−h337 80
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Annexe B Détermination des distrib
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233 Modèle 2 : 2 sous-unités lég
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235 1 0.9 0.8 6 s-u aléatoires 2 s
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Bibliographie Adair, G. S. The hemo
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BIBLIOGRAPHIE 239 Catalina, M. I.,
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BIBLIOGRAPHIE 241 Farmer, C. S., J.
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BIBLIOGRAPHIE 243 Hourdez, S. Adapt
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BIBLIOGRAPHIE 245 Mangum, C. P. Sub
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BIBLIOGRAPHIE 247 Rainer, J., C. P.
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BIBLIOGRAPHIE 249 Svedberg, T. et I
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BIBLIOGRAPHIE 251 Vanin, S., E. Neg
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Liste des figures 1.1 Cycle des mar
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LISTE DES FIGURES 255 4.17 Profils
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Table des matières Résumé Sommai
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TABLE DES MATIÈRES 261 4.3.5 Spect
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TABLE DES MATIÈRES 263 Table des m
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