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The Structural Analysis of Large Noncovalent Oxygen Binding Proteins Current Protein and Peptide Science, 2008, Vol. 9, No. 2 179
[46] Williams, S.K. and Lee, D. (2006) J. Sep. Sci., 29, 1720-1732.
[47] Fenn, J.B., Mann, M., Meng, C.K., Wong, S.F. and Whitehouse,
C.M. (1989) Science, 246, 64-71.
[48] Karas, M. and Hillenkamp, F. (1988) Anal. Chem., 60, 2299-2301.
[49] Tanaka, K., Wki, H., Ido, Y., Akita, S., Yoshida, Y. and Yoshida,
T. (1988) Rapid Commun. Mass Spectrom., 2, 151-153.
[50] van Duijn, E., Simmons, D.A., van den Heuvel, R.H., Bakkes, P.J.,
van Heerikhuizen, H., Heeren, R.M., Robinson, C.V., van der Vies,
S.M. and Heck, A.J. (2006) J. Am. Chem. Soc., 128, 4694-4702.
[51] Potier, N., Barth, P., Tritsch, D., Biellmann, J.F. and Van Dorsselaer,
A. (1997) Eur. J. Biochem., 243, 274-282.
[52] Ganem, B., Li, Y.T. and Henion, J.D. (1991) J. Am. Chem. Soc.,
113, 7818-7819.
[53] Robinson, C.V., Gross, M. and Radford, S.E. (1998) Methods
Enzymol., 290, 296-313.
[54] McCammon, M.G., Hernandez, H., Sobott, F. and Robinson, C.V.
(2004) J. Am. Chem. Soc., 126, 5950-5951.
[55] Verentchikov, A.N., Ens, W. and Standing, K.G. (1994) Anal.
Chem., 66, 126-133.
[56] Tang, X.J., Brewer, C.F., Saha, S., Chernushevich, I.V., Ens, W.
and Standing, K.G. (1994) Rapid Commun. Mass Spectrom., 8,
750-754.
[57] Morris, H.R., Paxton, T., Dell, A., Langhorne, J., Berg, M., Bordoli,
R.S., Hoyes, J. and Bateman, R.H. (1996) Rapid Commun.
Mass Spectrom., 10, 889-896.
[58] Wilm, M. and Mann, M. (1994) Int. J. Mass Spectrom. Ion Proc.,
136, 167-180.
[59] Rostom, A.A. and Robinson, C.V. (1999) J. Am. Chem. Soc., 121,
4718-4719.
[60] Tito, M.A., Tars, K., Valegard, K., Hajdu, J. and Robinson, C.V.
(2000) J. Am. Chem. Soc., 122, 3550-3551.
[61] Rostom, A., Fucini, P., Benjamin, D., Juenemann, R., Nierhaus, K.,
Hartl, F., Dobson, C. and Robinson, C. (2000) Proc. Natl Acad.
Sci. USA., 97, 5185-5190.
[62] Sanglier, S., Leize, E., Van Dorsselaer, A. and Zal, F. (2003) J. Am.
Soc. Mass Spectrom., 14, 419-429.
[63] Green, B.N., Gotoh, T., Suzuki, T., Zal, F., Lallier, F.H., Toulmond,
A. and Vinogradov, S.N. (2001) J. Mol. Biol., 309, 553-560.
[64] Robinson, C.V. and Radford, S.E. (1995) Structure, 3, 861-865.
[65] Ashcroft, A.E., Brinker, A., Coyle, J.E., Weber, F., Kaiser, M.,
Moroder, L., Parsons, M.R., Jaeger, J., Hartl, U.F., Hayer-Hartl, M.
and Radford, S.E. (2002) J. Biol. Chem., 277, 33115-33126.
[66] Konermann, L., Silva, E.A. and Sogbein, O.F. (2001) Anal. Chem.,
73, 4836-4844.
[67] Ganem, B., Li, Y.T. and Henion, J.D. (1991) J. Am. Chem. Soc.,
113, 6294-6296.
[68] Zal, F., Lallier, F.H., Green, B.N., Vinogradov, S.N. and Toulmond,
A. (1996) J. Biol. Chem., 271, 8875-8881.
[69] Zal, F., Kuster, B., Green, B.N., Harvey, D.J. and Lallier, F.H.
(1998) Glycobiology, 8, 663-673.
[70] Green, B.N., Kuchumov, A.R., Walz, D.A., Moens, L. and Vinogradov,
S.N. (1998) Biochemistry, 37, 6598-6605.
[71] Green, B.N., Bordoli, R.S., Hanin, L.G., Lallier, F.H., Toulmond,
A. and Vinogradov, S.N. (1999) J. Biol. Chem., 274, 28206-28212.
[72] Lamkemeyer, T., Zeis, B., Decker, H., Jaenicke, E., Waschbusch,
D., Gebauer, W., Markl, J., Meissner, U., Rousselot, M., Zal, F.,
Nicholson, G.J. and Paul, R.J. (2006) FEBS J., 273, 3393-3410.
[73] Zal, F., Chausson, F., Leize, E., Van, D.A., Lallier, F.H. and Green,
B.N. (2002) Biomacromolecules, 3, 229-231.
[74] Chausson, F., Sanglier, S., Leize, E., Hagege, A., Bridges, C.R.,
Sarradin, P.M., Shillito, B., Lallier, F.H. and Zal, F. (2004) Micron,
35, 31-41.
[75] Nguyen, S. and Fenn, J.B. (2007) Proc. Natl. Acad. Sci. USA., 104,
1111-1117.
[76] Siuzdak, G., Bothner, B., Yeager, M., Brugidou, C., Fauquet, C.M.,
Hoey, K. and Chang, C.M. (1996) Chem. Biol., 3, 45-48.
[77] Hogan, C.J., Jr, Kettleson, E.M., Ramaswami, B., Chen, D.R. and
Biswas, P. (2006) Anal. Chem., 78, 844-852.
[78] Patriksson, A., Marklund, E. and van der Spoel, D. (2007) Biochem.,
46, 933-945.
[79] Catalina, M.I., van den Heuvel, R.H., van Duijn, E. and Heck, A.J.
(2005) Chem. Eur. J., 11, 960-968.
[80] Royer, W.E., Jr., Strand, K., van Heel, M. and Hendrickson, W.A.
(2000) Proc. Natl. Acad. Sci. USA, 97, 7107-7111.
[81] Royer, W.E., Jr., Omartian, M.N. and Knapp, J.E. (2007) J. Mol.
Biol., 365, 226-236.
[82] Weber, R.E., Malte, H., Braswell, E.H., Oliver, R.W., Green, B.N.,
Sharma, P.K., Kuchumov, A. and Vinogradov, S.N. (1995) J. Mol.
Biol., 251, 703-720.
[83] Zal, F., Green, B.N., Lallier, F.H., Vinogradov, S.N. and Toulmond,
A. (1997) Eur. J. Biochem., 243, 85-92.
[84] Green, B.N., Suzuki, T., Gotoh, T., Kuchumov, A.R. and Vinogradov,
S.N. (1995) J. Biol. Chem., 270, 18209-18211.
[85] Zal, F., Lallier, F.H., Wall, J.S., Vinogradov, S.N. and Toulmond,
A. (1996) J. Biol. Chem., 271, 8869-8874.
[86] Yuasa, H.J., Green, B.N., Takagi, T., Suzuki, N., Vinogradov, S.N.
and Suzuki, T. (1996) Biochim. Biophys. Acta, 1296, 235-244.
[87] Zal, F., Green, B.N., Martineu, P., Lallier, F.H., Toulmond, A.,
Vinogradov, S.N. and Childress, J.J. (2000) Eur. J. Biochem., 267,
5227-5236.
[88] Zal, F., Green, B.N., Lallier, F.H. and Toulmond, A. (1997) Biochemistry,
36, 11777-11786.
[89] Rousselot, M. (2006) Ph.D. Thesis, Université Pierre-et-Marie-
Curie, Paris VI
[90] Taveau, J.C., Boisset, N., Vinogradov, S.N. and Lamy, J.N. (1999)
J. Mol. Biol., 289, 1343-1359.
[91] Jouan, L., Taveau, J.C., Marco, S., Lallier, F.H. and Lamy, J.N.
(2001) J. Mol. Biol., 305, 757-771.
[92] Rousselot, M., Harnois, T., Leize, E., Craig, S., Olive, P., LeGuen,
D., Zal, F. (2008) in prep.
[93] Vinogradov, S.N., Lugo, S.D., Mainwaring, M.G., Kapp, O.H. and
Crewe, A.V. (1986) Proc. Natl. Acad. Sci. USA, 83, 8034-8038.
[94] Vinogradov, S.N., Sharma, P.K., Qabar, A.N., Wall, J.S., Westrick,
J.A., Simmons, J.H. and Gill, S.J. (1991) J. Biol. Chem., 266,
13091-13096.
[95] Ownby, D.W., Zhu, H., Schneider, K., Beavis, R.C., Chait, B.T.
and Riggs, A.F. (1993) J. Biol. Chem., 268, 13539-13547.
[96] Zhu, H., Hargrove, M., Xie, Q., Nozaki, Y., Linse, K., Smith, S.S.,
Olson, J.S. and Riggs, A.F. (1996) J. Biol. Chem., 271, 29999-
30006.
[97] Vinogradov, S.N. (1985) Comp. Biochem. Physiol., 82B, 1-15.
[98] Vinogradov, S.N. (1985) In Respiratory pigments in animals.
(Lamy, J., Truchot, J.P. and Gilles, R., Eds.), pp. 9-20, Springer-
Verlag, Berlin.
[99] Gotoh, T. and Suzuki, T. (1990) Zool. Sci., 7, 1-16.
[100] Pionetti, J.M. and Pouyet, J. (1980) Eur. J. Biochem., 105, 131-
138.
[101] Ohtsuki, M. and Crewe, A.V. (1983) J. Ultrastruct. Res., 83, 312-
318.
[102] Messerschmidt, U., Wilhelm, P., Pilz, I., Kapp, O.H. and Vinogradov,
S. (1983) Biochim. Biophys. Acta, 742, 366-373.
[103] Krebs, A., Lamy, J., Vinogradov, S.N. and Zipper, P. (1998) Biopolymers,
45, 289-298.
[104] Svedberg, T. (1933) J. Biol. Chem., 103, 311-325.
[105] Lallier, F.H. and Truchot, J.P. (1997) J. Exp. Zool., 277, 357-364.
[106] Markl, J. (1986) Bio. Bull., 171, 90-115.
[107] Chausson, F., Bridges, C.R., Sarradin, P.M., Green, B.N., Riso, R.,
Caprais, J.C. and Lallier, F.H. (2001) Proteins, 45, 351-359.
[108] Volbeda, A. and Hol, W.G. (1989) J. Mol. Biol., 209, 249-279.
[109] Meissner, U., Stohr, M., Kusche, K., Burmester, T., Stark, H.,
Harris, J. R., Orlova, E. V. and Markl, J. (2003) J. Mol. Biol., 325,
99-109.
[110] Kuchumov, A.R., Taveau, J.C., Lamy, J.N., Wall, J.S., Weber, R.E.
and Vinogradov, S.N. (1999) J. Mol. Biol., 289, 1361-1374.
[111] Sharma, P.K., Kuchumov, A.R., Chottard, G., Martin, P.D., Wall,
J.S. and Vinogradov, S.N. (1996) J. Biol. Chem., 271, 8754-8762.
[112] Struck, T.H., Schult, N., Kusen, T., Hickman, E., Bleidorn, C.,
McHugh, D. and Halanych, K.M. (2007) BMC Evol. Biol., 7, 57.
[113] Rouse, G.W. (2001) Zoolog. J. Linn. Soc., 132, 55-80.
[114] McHugh, D. (1997) Proc. Natl. Acad. Sci. USA, 94, 8006-8009.
[115] Rouse, G.W. and Fauchald, K. (1998) Am. Zool., 38, 953-964.
[116] Daniel, E., Lustig, A., David, M.M. and Tsfadia, Y. (2003) Biochim.
Biophys. Acta, 1649, 1-15.
[117] Terwilliger, N.B. and Terwilliger, R.C. (1984) Mar. Biol. Lett., 5,
191-201.
[118] Mangum, C.P. (1996) Physiol. Zool., 69, 568-585.
[119] Herskovits, T.T., Erhunmwunsee, L.J., San George, R.C. and Herp,
A. (1981) Biochim. Biophys. Acta, 667, 44-58.
[120] Herskovits, T.T., San George, R.C. and Erhunmwunsee, L.J. (1981)
Biochemistry, 20, 2580-2587.
[121] Herskovits, T.T. and Hamilton, M.G. (1994) Comp. Biochem.
Physiol. Biochem. Mol. Biol., 107, 433-441.
100