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functional medicine and nutritional genomics - American Association ...

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AAPI’S NUTRITION GUIDE TO OPTIMAL HEALTH: USING PRINCIPLES OF FUNCTIONAL MEDICINE AND NUTRITIONAL GENOMICS<br />

Two primary arms of the immune system are the<br />

cytotoxic (Th-1) <strong>and</strong> humoral (Th-2) arms, where<br />

‚Th‛ denotes thymus, an organ thought to contribute to<br />

educating the Tcells.<br />

The cytotoxic arm is involved in cell-to-cell defenses,<br />

where the immune cell acts directly against the<br />

pathogen. The humoral immune response is antibody<br />

mediated.<br />

The immune system is modulated in part by the<br />

endocrine system.(23) The balance of the cellular<br />

<strong>and</strong> humoral arms of the immune system is regulated<br />

in part by the hormonal environment with testosterone,<br />

DHT, DHEA <strong>and</strong> DHEA-S favoring a shift toward<br />

cellular (Th1 immunity) <strong>and</strong> glucocorticoids, estrogens,<br />

<strong>and</strong> catecholamines favoring a shift toward the<br />

humoral, or antibody producing, (Th2) arm of the<br />

immune system.<br />

Gut Biome <strong>and</strong> the Immune System<br />

70-80% of the immune system cells are located<br />

around the gastrointestinal tract. There is evidence that<br />

the gut flora act to educate the immune system in<br />

self-recognition during the early years of life, as the<br />

gut environment changes in relationship to the foods<br />

that are eaten.(20) The balance of organisms in the<br />

gut therefore influence the immune activity within the<br />

gut, setting the stage for health or disease.<br />

The gut biome is very responsive to changes in diet,<br />

hormones, <strong>and</strong> stress <strong>and</strong> can shift in its balance of<br />

flora, the implications of which are not well<br />

understood.(22) This is an emerging science <strong>and</strong> is<br />

only included here to bring an awareness to the reader<br />

that there is a sophisticated <strong>and</strong> complex relationship<br />

between the organisms living within the gut, the human<br />

immune response, <strong>and</strong> the health of the human<br />

organism.(21)<br />

Evolution of sensitivity<br />

Food Sensitivity as an Immune Phenomena<br />

Consider that the development of food sensitivity is an<br />

evolutionary process; it is not likely a sudden or<br />

isolated event. The development of food sensitivity<br />

involves the exposure of the immune cells to food<br />

antigens, which requires the breakdown of multiple<br />

76<br />

2012<br />

steps in human anatomy <strong>and</strong> physiology. You learned<br />

about these steps in isolation in the preceding<br />

paragraphs. Now we will tie these concepts together to<br />

help you underst<strong>and</strong> how the process might develop.<br />

In order for food sensitivity to develop, the immune<br />

system must be exposed to food antigen. Food antigen<br />

is essentially poorly digested food. When optimal<br />

digestion has occurred, food has been broken down<br />

into its basic macronutrient components as it passes<br />

through the digestive tract. Furthermore, in order for<br />

the immune system to ‚see‛ a food antigen requires<br />

the gut barrier to be permeable to the contents of the<br />

digestive tract, a concept referred to as intestinal<br />

hyper-permeability. Poor digestion alone may not lead<br />

to the development of significant food sensitivity if<br />

there is adequate integrity of the enterocyte lining. In<br />

contrast, ensuring optimal digestion beginning with the<br />

choice of foods <strong>and</strong> how they are eaten may play a<br />

role in preventing or minimizing the development of<br />

food sensitivity if the patient has a problem with the<br />

barrier of the enterocyte layer, or a ‚leaky gut.‛<br />

The bacterial environment within the gut could be a<br />

starting point for the establishment of food sensitivity<br />

as well. Gut floral imbalances <strong>and</strong> overgrowth (termed<br />

dysbiosis) can lead to a pro-inflammatory environment<br />

within the gut. This inflammatory state may increase<br />

the degree of intestinal permeability, setting the stage<br />

for prolonged exposure of the immune cells to the<br />

intestinal contents.<br />

Dysbiosis<br />

The human microbiota is undergoing intensive study.<br />

The Human Microbiota Project which began in 2007<br />

as an extension of the Human Genome Project is<br />

intended to underst<strong>and</strong> the role of human microbial<br />

communities in human health.(28) The gut biome<br />

alone contains up to 100 trillion organisms of<br />

approximately 500 to 1000 species. The term<br />

dysbiosis refers to an abnormal, or imbalanced, growth<br />

of organisms in the digestive tract that may lead to<br />

such issues as poor digestion, malabsorption, intestinal<br />

hyper-permeability, inflammation, <strong>and</strong> other problems in<br />

various systems of the body.<br />

Dysbiosis may be caused by the growth of a specific<br />

pathogen or the overgrowth or absence of a<br />

commensal organism. These organisms likely play a

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