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Insect Control: Biological and Synthetic Agents - Index of

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Figure 9 Stable conformations <strong>and</strong> predicted properties <strong>of</strong><br />

binding site: imidacloprid (white), nitenpyram (blue), acetamiprid<br />

(red). (Adapted from Akazawa et al., 2000.)<br />

Figure 10 Alignment <strong>of</strong> DFT/BP/SVP/COSMO optimized geometries<br />

<strong>of</strong> imidacloprid, clothianidin, dinotefuran, <strong>and</strong> acetamiprid.<br />

The alignment was done by minimization <strong>of</strong> the mutual<br />

spatial distance <strong>of</strong> three pharmacophoric points, namely (i) the<br />

positively charged carbon atom connected to the ›N w NO2 <strong>and</strong><br />

›N w CN moiety, respectively, (ii) the nitro/cyano groups themselves,<br />

<strong>and</strong> (iii) the nitrogens <strong>of</strong> the aromatic rings <strong>and</strong> the<br />

oxygen <strong>of</strong> the tetrahydr<strong>of</strong>uran ring.<br />

Figure 10 shows atom-based aligments <strong>of</strong> imidacloprid,<br />

clothianidin, dinotefuran <strong>and</strong> acetamiprid.<br />

The aligment shown does not necessarily reflect the<br />

active conformation. However, the following arguments<br />

hold true for each <strong>of</strong> these family <strong>of</strong> conformers.<br />

The ion pairs <strong>of</strong> the aromatic nitrogen atoms<br />

in imidacloprid, clothianidin, <strong>and</strong> acetamiprid point<br />

in the same direction, <strong>and</strong> that this is also true for one<br />

<strong>of</strong> the two ion pairs <strong>of</strong> oxygen in dinotefuran. The<br />

tetrahydr<strong>of</strong>uryl ring <strong>of</strong> dinotefuran is more or less<br />

perpendicular to the heteroaromatic ring systems <strong>of</strong><br />

the other neonicotinoids.<br />

3: Neonicotinoid <strong>Insect</strong>icides 73<br />

Visual inspection <strong>of</strong> the nucleophilic Fukui<br />

functions (Figure 11) shows that the tetrahydr<strong>of</strong>uryl<br />

ring <strong>of</strong> dinotefuran differs dramatically from the<br />

other neonicotinoids under investigation. While<br />

the latter all show some large contributions at the<br />

aromatic moiety, the tetrahydr<strong>of</strong>uryl moiety seems<br />

to be much less attractive for nucleophilic attack.<br />

3.3.3.2. Isosteric alternatives to the heterocyclic<br />

N-substituents The nitrogen-containing hetarylmethyl<br />

group as N-substituent (CPM, CTM) has<br />

a remarkably strong influence on the insecticidal<br />

activity. X-ray crystal structure analysis <strong>of</strong> imidacloprid<br />

<strong>and</strong> related neonicotinoids indicated that distances<br />

between the van der Waals surface <strong>of</strong> the<br />

CPM nitrogen <strong>and</strong> the atomic center <strong>of</strong> the pharmacophoric<br />

nitrogen are 5.45–6.06 A ˚ (Tomizawa et al.,<br />

2000). This range coincides with the distance between<br />

the ammonium nitrogen <strong>and</strong> carbonyl oxygen<br />

<strong>of</strong> acetylcholine, <strong>and</strong> between the nitrogen atoms<br />

<strong>of</strong> (S)-nicotine (Kagabu, 1997a). Alternatively, the<br />

CPM <strong>and</strong> CTM moieties were assumed to be able<br />

to participate in hydrogen bonding, like the pyridine<br />

ring <strong>of</strong> (S)-nicotine, <strong>and</strong> that this is important<br />

for the insecticidal activity. The CTM substituent<br />

generally confers higher potency in the clothianidin<br />

<strong>and</strong> N-desmethyl-thiamethoxam series than the CPM<br />

moiety in the imidacloprid, thiacloprid, acetamiprid,<br />

<strong>and</strong> nitenpyram series (Zhang et al., 2000). Surprisingly,<br />

replacing both CPM <strong>and</strong> CTM by an oxygencontaining<br />

five-membered heterocycle resulted in a<br />

novel N-substituent TFM, that led to the development<br />

<strong>of</strong> the insecticide ( )-dinotefuran. It was found<br />

that the TFM structure can be taken as an isoster <strong>of</strong><br />

the CPM <strong>and</strong> CTM moiety (Kagabu et al., 2002). In<br />

an attempt to underst<strong>and</strong> this, the hydrogen bonding<br />

regions <strong>of</strong> CPM, CTM, <strong>and</strong> TFM were projected<br />

onto their respective Connolly surfaces (Jeschke et al.,<br />

2002) (Figure 12).<br />

3.3.3.3. Bioisosteric pharmacophors The particularly<br />

high potency <strong>of</strong> the neonicotinoids bearing<br />

N-nitroimino, N-cyanoimino, or nitromethylene<br />

moieties, which have a negative electrostatic potential,<br />

implies a positive electrostatic potential for<br />

the corresponding insect nAChR recognition site<br />

(Nakayama <strong>and</strong> Sukekawa, 1998). Therefore, considerable<br />

attention has been given to the possible<br />

involvement <strong>of</strong> the pharmacophoric nitrogen in neonicotinoid<br />

action. In order to underst<strong>and</strong> better the<br />

structural requirements, binding activity was analyzed<br />

using CoMFA (Akamatsu et al., 1997). SAR<br />

analyses have also been performed for in vitro activities<br />

(Nishimura et al., 1994). In particular, 3D QSAR

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