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Insect Control: Biological and Synthetic Agents - Index of

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128 4: <strong>Insect</strong> Growth- <strong>and</strong> Development-Disrupting <strong>Insect</strong>icides<br />

Figure 3 Different elevations <strong>of</strong> computer model(s) <strong>of</strong> the three-dimensional structure <strong>of</strong> the LBD <strong>of</strong> insect ecdysone receptors.<br />

The different helices are represented in different colors, <strong>and</strong> indicated by arrows <strong>and</strong> numbers. After a lig<strong>and</strong> has docked into the<br />

lig<strong>and</strong> binding pocket <strong>of</strong> EcR heterodimerizd with USP, helix 12 closes on the binding cavity like a ‘‘mouse trap.’’<br />

ability to bind was unaffected. Changing A110 to<br />

leucine was as effective as the change to proline.<br />

Further work along these lines should make it possible<br />

not only to design new effective chemistries as<br />

ecdysone agonists/antagonists for pest control, but<br />

also to design EcR LBDs that result in productive<br />

binding with different chemistries, thus allowing<br />

their use in several gene switch applications.<br />

The necessity <strong>of</strong> EcR <strong>and</strong> USP forming a heterodimer<br />

for lig<strong>and</strong> interaction coupled with the difficulty<br />

in producing large enough quantities <strong>of</strong> EcR<br />

<strong>and</strong> USP LBDs required for X-ray diffraction studies<br />

have been overcome by Billas et al. (2003). These<br />

authors reported the crystal structures <strong>of</strong> the LBDs<br />

<strong>of</strong> the moth H. virescens EcR-USP heterodimer in<br />

complex with the ecdysteroid ponasterone A <strong>and</strong><br />

with a nonsteroidal, lepidopteran specific agonist,<br />

BY106830 (a bisacylhydrazine). Comparison <strong>of</strong> the<br />

crystal structures lig<strong>and</strong>ed with ponasterone A <strong>and</strong><br />

BY106830 revealed that the two lig<strong>and</strong>s occupy<br />

very different but slightly overlapping spaces in the<br />

lig<strong>and</strong> binding pockets. The overlap <strong>of</strong> the two<br />

lig<strong>and</strong>s was observed on the side chain <strong>of</strong> ponasterone<br />

A with the t-butyl group <strong>and</strong> the benzoyl ring<br />

closest to it in BY106830. The presence <strong>of</strong> the<br />

t-butyl group <strong>and</strong> its occupation in a hydrophobic<br />

groove <strong>of</strong> the HvEcR LB pocket confers lepidopteran<br />

specificity on it. Further examination <strong>of</strong> the residues<br />

in this hydrophobic cavity revealed that V384<br />

in helix 5, which was conserved in lepidopteran insect<br />

EcR LBDs <strong>and</strong> is replaced by methionine in other<br />

insects, is essential for the lepidopteran specificity.<br />

The crystal structure observations supported the<br />

results <strong>of</strong> Kumar et al.(2002).<br />

4.2.2.3. Lig<strong>and</strong>-dependent conformational<br />

changes Yao et al. (1995) used limited proteolysis<br />

protection to demonstrate that binding <strong>of</strong> muristerone<br />

A, a potent ecdysteroid, to Drosophila melanogaster<br />

EcR <strong>and</strong> USP (DmEcR/DmUSP) induces a<br />

conformation change in EcR that can be detected<br />

by sodium dodecylsulfate polyacrylamide gel electrophoresis<br />

(SDS–PAGE) <strong>and</strong> autoradiography. In<br />

these experiments, incubation <strong>of</strong> muristerone<br />

A with DmEcR- 35 S-methionine labeled/DmUSP<br />

proteins produced by transcription <strong>and</strong> translation<br />

<strong>of</strong> corresponding cDNAs in rabbit reticulocyte cellfree<br />

mixtures, afforded partial protection to EcR<br />

from trypsin as the protease. In an extension <strong>of</strong> this<br />

approach, Dhadialla et al. (unpublished data) used<br />

EcR- 35 S-methionine labeled/USP proteins produced<br />

in vitro to demonstrate that muristerone A bound to<br />

DmEcR/DmUSP, Aedes aegypti EcR <strong>and</strong> USP<br />

(AeEcR/AeUSP), <strong>and</strong> CfEcR/CfUSP protected an<br />

EcR fragment <strong>of</strong> 36 kDa from limited proteolysis<br />

with trypsin, chymotrypsin, <strong>and</strong> proteinase K. On<br />

the other h<strong>and</strong>, the ability <strong>of</strong> tebufenozide (RH-<br />

5992) to induce a similar conformational change<br />

upon binding to EcR, which affords limited proteolytic<br />

protection as with muristerone A, correlated<br />

with its affinity to the various EcRs (Table 3). Interestingly,<br />

peptide fragments <strong>of</strong> a similar size (36 kDa)

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