21.01.2013 Views

note - FIZ Karlsruhe

note - FIZ Karlsruhe

note - FIZ Karlsruhe

SHOW MORE
SHOW LESS

You also want an ePaper? Increase the reach of your titles

YUMPU automatically turns print PDFs into web optimized ePapers that Google loves.

Text and Bibliographic searching<br />

Refine the search results to human or unknown organism sequences<br />

=> S L3 AND (HOMO(W)SAPIENS OR SYNTHETIC OR UNIDENTIFIED)/ORGN<br />

L4 129 L3 AND (HOMO(W)SAPIENS OR SYNTHETIC OR UNIDENTIFIED)/ORGN<br />

=> D AN MTY DESC ORGN<br />

Note: although human sequences are indexed as<br />

Homo sapiens, it is important to take into account<br />

L4 ANSWER 1 OF 129 DGENE COPYRIGHT 2010 sequences THOMSON of potential REUTERS interest on which STN may not have<br />

AN ATS24295 DGENE<br />

a defined source organism (L4) in the patent.<br />

MTY DNA<br />

DESC Human SCR-1-related DNA (having unknown function), SEQ ID:47.<br />

ORGN Homo sapiens.<br />

Refine the search results using Basic Index (BI) and Molecule Type (MTY) terms<br />

=> S L4 AND (EST OR EXPRESSED SEQUENCE TAG)<br />

Reminder: the DGENE Basic Index<br />

L5 33 L4 AND (EST OR EXPRESSED SEQUENCE TAG) incorporates the Title, Description<br />

and Keywords fields, but does NOT<br />

=> S L5 AND CDNA/MTY<br />

include the Molecule Type (/MTY).<br />

L6 24 L5 AND CDNA/MTY<br />

=> S L6 AND ((ACQUIRED(W)(IMMUNE DEFICIENCY OR IMMUNODEFICIENCY)(W)SYNDROME OR<br />

AIDS) OR (HUMAN(W)(IMMUNE DEFICIENCY OR IMMUNODEFICIENCY)(W)VIRUS OR HIV))<br />

L7 15 L6 AND ((ACQUIRED(W)(IMMUNE DEFICIENCY OR IMMUNODEFICIENCY)(W)SY<br />

NDROME OR AIDS) OR (HUMAN(W)(IMMUNE DEFICIENCY OR IMMUNODEFICIEN<br />

CY)(W)VIRUS OR HIV))<br />

Of the 341 sequence search results<br />

=> D TRIAL<br />

retrieved (L2), 15 sequence records<br />

(L7) also have a priority date and all<br />

L7 ANSWER 1 OF 15 DGENE COPYRIGHT 2010 THOMSON the REUTERS scientific on concepts STN of interest.<br />

AN ACH04322 cDNA DGENE<br />

TI Novel isolated polypeptide having stem cell growth factor activity,<br />

useful for promoting wound healing, and as a medicine to proliferate or<br />

support human hematopoietic stem cells or human hematopoietic progenitor<br />

cells -<br />

DESC Human stem cell growth factor-like protein EST contig.<br />

KW Stem cell growth factor-like protein; antianemic; anti-HIV; SCR-1;<br />

immunostimulant; vulnerary; haematopoietic stem cell; gene therapy;<br />

supporting factor for proliferation of stem cells; wound healing;<br />

haematopoietic progenitor cell; stromal cell; AIDS; thalassaemia; bone<br />

marrow transplantation; cord blood transplantation; chronic granulomatous<br />

disease; duplicated immunodeficiency syndrome; agammaglobulinaemia;<br />

Wiskott-Aldrich syndrome; haemolytic anaemia; congenital anaemia;<br />

sicklaemia; Gaucher's disease; morphogenesis; epithelial cell growth;<br />

ovarian follicle development; nerve cell growth; cartilage remodeling;<br />

bone growth; immunosuppression; human; ss; EST; expressed sequence tag.<br />

SQL 1345<br />

Sort similarity score descending<br />

=> SOR SCORE D<br />

PROCESSING COMPLETED FOR L7<br />

L8 15 SOR L7 SCORE D<br />

Page 96 | GENESEQ on STN (DGENE) Workshop Manual<br />

Tip: use SORT SCORE D to rearrange results into<br />

descending BLAST score order, after after refining<br />

the BLAST search (L2) with text or date terms (L8).

Hooray! Your file is uploaded and ready to be published.

Saved successfully!

Ooh no, something went wrong!