note - FIZ Karlsruhe

Database Content
9251 gcggtgaaga ccaagctcaa actcactcca ttgccggagg cgcgcctact
9301 ggacttatcc agttggttca ccgtcggcgc cggcgggggc gacatttttc
9351 acagcgtgtc gcgcgcccga ccccgctcat tactcttcgg cctactccta
9401 cttttcgtag gggtaggcct cttcctactc cccgctcggt agagcggcac
9451 acactaggta cactccatag ctaactgttc cttttttttt tttttttttt
9501 tttttttttt tttttttttt ttttcttttt tttttttttc cctctttctt
9551 cccttctcat cttattctac tttctttctt ggtggctcca tcttagccct
9601 agtcacggct agctgtgaaa ggtccgtgag ccgcatgact gcagagagtg
9651 ccgtaactgg tctctctgca gatcatgt
FEATURE TABLE:
Key |Location |Qualifier|
==========+=========+=========+=======================
CDS |341..9442|*tag= a |
| |product |"QC69/JFH1 protein"
(1) Accession Number (AN) – a unique sequence identifier assigned by Thomson Reuters.
(2) Molecule Type (MTY) – indexed from a controlled term list (see page 132).
(3) Derwent World Patents Index (DWPI) enhanced patent title describing the over all invention.
(4) Inventor names (IN), in surname initials format.
(5) Standardized Patent Assignee name (PA) and Patent Assignee Code (PACO).
(6) Publication, application and priority details from the indexed DWPI basic patent.
(7) The Patent Sequence Location (PSL). Either claim, example or disclosure is indexed here.
(8) Other source (OS) is the Accession Number of the corresponding DWPI record. Internal
Cross References (CR) are provided to any related DGENE records from the same patent, e.g.
AXW15694 was disclosed as the protein encoded by AXW15693. See note below. External
cross references may also be provided in the CR field, e.g. “PC-NCBI: gi222875998” 1 .
(9) Description (DESC), Keyword (KW) and Abstract (AB) fields describe the nature and context
of the sequence within the over all invention. There is one abstract per sequence in DGENE.
(10) Organism name (ORGN) providing the name of the species from which the sequence is
derived. This is typically provided in the Latin form: genus species.
(11) Sequence Length (SQL) and count of the individual amino acids in a polypeptide (AA) or
individual nucleotides in a nucleic acid sequence (NA). These are numeric search fields
(12) The sequence (SEQ) represented with one letter codes. Uncommon amino acids are indicated
with X. Non-standard nucleotides are indicated with N.
(13) Feature table (FEAT) describing the modifications and features of the indexed sequence as
provided by the patent applicant and/or the Thomson Reuters analyst (see page 128).
note
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Each record in DGENE represents a single sequence. Since the indexed
DWPI basic patent may contain more than one sequence, there will often be
more than one DGENE sequence record per DWPI patent record.
The DWPI Accession Number (AN) is given in the DGENE Other Source
(OS) field to facilitate navigation between the two databases.
1 NCBI sequence GI:222875998: http://www.ncbi.nlm.nih.gov/nuccore/222875998.
Page 8 | GENESEQ on STN (DGENE) Workshop Manual
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