The Mitochondrial Free Radical Theory of Aging - Supernova: Pliki
The Mitochondrial Free Radical Theory of Aging - Supernova: Pliki The Mitochondrial Free Radical Theory of Aging - Supernova: Pliki
An Introduction to Mitochondria Fig. 2.4. Acetaldehyde, CoA and acetyl CoA. I say it was worked out in the 1930s, but in fact one very important step was absent until 1953. Until then, it was thought that the TCA cycle created no ATP. But in fact, one of the steps in Krebs's original formulation—the conversion of α-oxoglutarate to succinate—occurs in two steps, with coenzyme A as a cofactor, and the latter of these steps includes the creation of one molecule of guanine triphosphate (GTP) from GDP and phosphate. 18 This reaction is followed by a transphosphorylation reaction, mediated by the enzyme nucleoside diphosphate kinase, in which the GTP is turned back into GDP and the released phosphate is transferred to ADP making ATP. Many bacteria skip this last complication and phosphorylate ADP directly in the succinate synthesis step. 19 2.3.3.3. Repaying the Oxygen Debt: Respiration At this point, the destruction of one molecule of glucose has consumed six molecules of water and yielded six molecules of carbon dioxide. Additionally, it has stored up 24 hydrogen atoms—12 from the original glucose and 12 from the water—whose protons are free in the aqueous medium, while their electrons are carried by ten molecules of NADH and two of FADH2. There is a limit to our supply of NAD + and FAD, and also to the number 15
16 The Mitochondrial Free Radical Theory of Aging Fig. 2.5. The tricarboxylic acid, or citric acid, or Krebs cycle. of protons that can be discarded into the matrix without changing its chemical properties, so this is only a sustainable process if the electrons and protons can be off-loaded. This is done by combining them with oxygen: and this time, the oxygen used is the straightforward, molecular oxygen (O2) that we breathe, not borrowed from some other molecule. Each molecule of O2 is combined with four electrons and four protons (that is with four hydrogen atoms) to make two molecules of water. Thus, six molecules of O2 are used to get rid of the hydrogen that came from oxidizing one molecule of glucose. This process may sound quite simple, but the machinery that achieves it is extremely elaborate, involving dozens of proteins formed into four large structures called Complexes I, II, III, and IV. (These structures also have long enzymatic names, respectively, NADH dehydrogenase, succinate dehydrogenase, ubiquinol-cytochrome c oxidoreductase and cytochrome c oxidase.) It also involves two other small molecules: coenzyme Q (abbreviated "CoQ"), which is not a protein but a quinone (see Fig. 2.6) and which transports electrons from Complexes I and II to Complex III, and cytochrome c, which is a small protein that transports electrons from Complex III to IV. Complex IV is the place where the electrons are combined with oxygen. This sequential arrangement of components gives rise to the terms "respiratory chain" or "electron transport chain" to describe the whole system starting at Complexes I and II and ending at Complex IV (see Fig. 2.7). How does an electron get passed along the respiratory chain? For the most part, it is carried by atoms of metals that are able easily to vary the number of electrons they carry (their valency). Such metals (iron, for example) are called transition metals. They will feature
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An Introduction to Mitochondria<br />
Fig. 2.4. Acetaldehyde, CoA and acetyl CoA.<br />
I say it was worked out in the 1930s, but in fact one very important step was absent until<br />
1953. Until then, it was thought that the TCA cycle created no ATP. But in fact, one <strong>of</strong> the steps<br />
in Krebs's original formulation—the conversion <strong>of</strong> α-oxoglutarate to succinate—occurs in<br />
two steps, with coenzyme A as a c<strong>of</strong>actor, and the latter <strong>of</strong> these steps includes the creation<br />
<strong>of</strong> one molecule <strong>of</strong> guanine triphosphate (GTP) from GDP and phosphate. 18 This reaction<br />
is followed by a transphosphorylation reaction, mediated by the enzyme nucleoside<br />
diphosphate kinase, in which the GTP is turned back into GDP and the released phosphate<br />
is transferred to ADP making ATP. Many bacteria skip this last complication and<br />
phosphorylate ADP directly in the succinate synthesis step. 19<br />
2.3.3.3. Repaying the Oxygen Debt: Respiration<br />
At this point, the destruction <strong>of</strong> one molecule <strong>of</strong> glucose has consumed six molecules<br />
<strong>of</strong> water and yielded six molecules <strong>of</strong> carbon dioxide. Additionally, it has stored up 24<br />
hydrogen atoms—12 from the original glucose and 12 from the water—whose protons are<br />
free in the aqueous medium, while their electrons are carried by ten molecules <strong>of</strong> NADH<br />
and two <strong>of</strong> FADH2. <strong>The</strong>re is a limit to our supply <strong>of</strong> NAD + and FAD, and also to the number<br />
15