Essential Cell Biology 5th edition
356 CHAPTER 10 Analyzing the Structure and Function of Genesreplaced by the altered one. In this way, the function of the mutant proteincan be analyzed in the absence of the normal protein. A common wayof doing this in mice makes use of cultured mouse embryonic stem (ES)cells (discussed in Chapter 20). These cells are first subjected to targetedgene replacement before being transplanted into a developing embryo toproduce a mutant mouse, as illustrated in Figure 10–28.Using a similar strategy, the activities of both copies of a gene can beeliminated entirely, creating a “gene knockout.” To do this, one caneither introduce an inactive, mutant version of the gene into cultured EScells or delete the gene altogether. The ability to use ES cells to producesuch “knockout mice” revolutionized the study of gene function, and the(A)ES cells growingin culture(B)pregnant mousealtered versionof target geneconstructed bygeneticengineeringINTRODUCE A DNAFRAGMENT CONTAININGALTERED GENE INTOMANY CELLSLET EACH ES CELLPROLIFERATE TOFORM A COLONYINJECT ALTEREDES CELLSINTO EARLYEMBRYOISOLATE EARLYEMBRYOFigure 10–28 Targeted gene replacementin mice utilizes embryonic stem (ES)cells. (A) First, an altered version of thegene is introduced into cultured ES cells.In a few rare ES cells, the altered gene willreplace the corresponding normal genethrough homologous recombination (asdescribed in Chapter 6, pp. 220−222 andFigure 6−31). Although the procedure isoften laborious, these rare cells can beidentified and cultured to produce manydescendants, each of which carries analtered gene in place of one of its twonormal corresponding genes. (B) Next, thealtered ES cells are injected into a very earlymouse embryo; the cells are incorporatedinto the growing embryo, which thendevelops into a mouse that contains somesomatic cells (colored orange) that carry thealtered gene. Some of these mice may alsohave germ-line cells that contain the alteredgene; when bred with a normal mouse,some of the progeny of these mice willcontain the altered gene in all of their cells.Such a mouse is called a “knock-in” mouse.If two such mice are bred, one can obtainprogeny that contain two copies of thealtered gene—one on each chromosome—in all of their cells.TAKE CELLS FROM THERARE COLONY IN WHICHTHE DNA FRAGMENTHAS REPLACED ONECOPY OF THENORMAL GENEES cells with one copy of targetgene replaced by altered genesome of theseoffspring havegerm-line cellscontaining altered genethe offspring willinclude males andfemales with one copyof target genealtered in all cellsEARLY EMBRYO FORMEDPARTLY FROM ALTEREDES CELLSINTRODUCE EARLYEMBRYO INTOPSEUDOPREGNANTMOUSEBIRTHMATE WITHNORMAL MOUSEMATINGTRANSGENIC MOUSEIN WHICH BOTH COPIES OFTARGET GENE ARE ALTERED
Exploring Gene Function357(A)(B)Figure 10–29 Transgenic mice with a mutant DNA helicase show prematureaging. The helicase, encoded by the Xpd gene, is involved in both transcriptionand DNA repair. Compared with a wild-type mouse (A), a transgenic mouse thatexpresses a defective version of Xpd (B) exhibits many of the symptoms of prematureaging, including osteoporosis, emaciation, early graying, infertility, and reduced lifespan.The mutation in Xpd used here impairs the activity of the helicase and mimicsECB5 e10.36/10.29a human mutation that causes trichothiodystrophy, a disorder characterized by brittlehair, skeletal abnormalities, and a greatly reduced life expectancy. These resultssupport the hypothesis that an accumulation of DNA damage contributes to theaging process in both humans and mice. (From J. de Boer et al., Science 296:1276–1279, 2002. With permission from AAAS.)technique is now being used to systematically determine the function ofevery mouse gene (Figure 10–29).A variation of this technique can be used to produce conditional knockoutmice, in which a known gene can be disrupted more selectively—only ina particular cell type or at a certain time in development. The strategyinvolves the introduction of an enzyme, called a recombinase, that canbe directed to selectively excise—and thus disable—a gene of interest(Figure 10−30). Such conditional knockouts are useful for studying geneswith a critical function during development, because mice missing thesecrucial genes often die before birth.IN NON-TARGET TISSUES (e.g., MUSCLE), THE GENE OF INTEREST IS EXPRESSED NORMALLYCre recombinase geneLoxP sitegene of interestLoxP siteliver-specific promoterINACTIVEIN TARGET TISSUE (e.g., LIVER), THE GENE OF INTEREST IS DELETEDliver-specific promoterACTIVEGENE OFFGENE ONgene of interest removedfrom chromosome andlost as cells divideCre recombinase madeonly in liver cellsGENE ONaltered chromosomeGENE OFFprotein ofinterestCre RECOMBINASEBINDS TO LoxP SITESCre CATALYZESRECOMBINATIONBETWEEN LoxP SITESFigure 10–30 In conditional knockouts,a gene can be selectively disabled in aparticular target tissue. The approachrequires the insertion of two engineeredsegments of DNA into an animal’s germ-linecells. The first contains the gene encoding arecombinase (in this case, Cre recombinase)that is under the control of a tissue-specificpromoter. This promoter ensures thatrecombinase will be produced only in thetarget tissue. The second DNA moleculecontains the gene of interest flanked bynucleotide sequences (in this case, LoxPrecombination sites) that are recognized bythe recombinase. The mouse is engineeredso that this version of the gene of interest isthe only copy the animal has.In non-target tissues, no recombinase willbe produced and the gene of interest willbe expressed normally. In the target tissue,however, the tissue-specific promoter willbe activated, allowing the recombinase tobe produced. The enzyme will then bind tothe LoxP sites and catalyze a recombinationreaction that will excise the gene ofinterest—thus disabling it specifically in thetarget tissue.
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356 CHAPTER 10 Analyzing the Structure and Function of Genes
replaced by the altered one. In this way, the function of the mutant protein
can be analyzed in the absence of the normal protein. A common way
of doing this in mice makes use of cultured mouse embryonic stem (ES)
cells (discussed in Chapter 20). These cells are first subjected to targeted
gene replacement before being transplanted into a developing embryo to
produce a mutant mouse, as illustrated in Figure 10–28.
Using a similar strategy, the activities of both copies of a gene can be
eliminated entirely, creating a “gene knockout.” To do this, one can
either introduce an inactive, mutant version of the gene into cultured ES
cells or delete the gene altogether. The ability to use ES cells to produce
such “knockout mice” revolutionized the study of gene function, and the
(A)
ES cells growing
in culture
(B)
pregnant mouse
altered version
of target gene
constructed by
genetic
engineering
INTRODUCE A DNA
FRAGMENT CONTAINING
ALTERED GENE INTO
MANY CELLS
LET EACH ES CELL
PROLIFERATE TO
FORM A COLONY
INJECT ALTERED
ES CELLS
INTO EARLY
EMBRYO
ISOLATE EARLY
EMBRYO
Figure 10–28 Targeted gene replacement
in mice utilizes embryonic stem (ES)
cells. (A) First, an altered version of the
gene is introduced into cultured ES cells.
In a few rare ES cells, the altered gene will
replace the corresponding normal gene
through homologous recombination (as
described in Chapter 6, pp. 220−222 and
Figure 6−31). Although the procedure is
often laborious, these rare cells can be
identified and cultured to produce many
descendants, each of which carries an
altered gene in place of one of its two
normal corresponding genes. (B) Next, the
altered ES cells are injected into a very early
mouse embryo; the cells are incorporated
into the growing embryo, which then
develops into a mouse that contains some
somatic cells (colored orange) that carry the
altered gene. Some of these mice may also
have germ-line cells that contain the altered
gene; when bred with a normal mouse,
some of the progeny of these mice will
contain the altered gene in all of their cells.
Such a mouse is called a “knock-in” mouse.
If two such mice are bred, one can obtain
progeny that contain two copies of the
altered gene—one on each chromosome—
in all of their cells.
TAKE CELLS FROM THE
RARE COLONY IN WHICH
THE DNA FRAGMENT
HAS REPLACED ONE
COPY OF THE
NORMAL GENE
ES cells with one copy of target
gene replaced by altered gene
some of these
offspring have
germ-line cells
containing altered gene
the offspring will
include males and
females with one copy
of target gene
altered in all cells
EARLY EMBRYO FORMED
PARTLY FROM ALTERED
ES CELLS
INTRODUCE EARLY
EMBRYO INTO
PSEUDOPREGNANT
MOUSE
BIRTH
MATE WITH
NORMAL MOUSE
MATING
TRANSGENIC MOUSE
IN WHICH BOTH COPIES OF
TARGET GENE ARE ALTERED