Essential Cell Biology 5th edition
4 CHAPTER 1 Cells: The Fundamental Units of LifenucleotidesDNA synthesisREPLICATIONamino acidsRNA synthesisTRANSCRIPTIONprotein synthesisTRANSLATIONDNARNAPROTEINFigure 1–2 In all living cells, geneticinformation flows from DNA to RNA(transcription) and from RNA to protein(translation)—an arrangement knownas the central dogma. The sequence ofnucleotides in a particular segment ofDNA (a gene) is transcribed into an RNAmolecule,ECB5whiche1.02/1.02can then be translated intothe linear sequence of amino acids of aprotein. Only a small part of the gene, RNA,and protein is shown.organism reproduces. Thus, in every cell, long polymer chains of DNAare made from the same set of four monomers, called nucleotides, strungtogether in different sequences like the letters of an alphabet. The informationencoded in these DNA molecules is read out, or transcribed, intoa related set of polynucleotides called RNA. Although some of these RNAmolecules have their own regulatory, structural, or chemical activities,most are translated into a different type of polymer called a protein. Thisflow of information—from DNA to RNA to protein—is so fundamental tolife that it is referred to as the central dogma (Figure 1−2).The appearance and behavior of a cell are dictated largely by its proteinmolecules, which serve as structural supports, chemical catalysts,molecular motors, and much more. Proteins are built from amino acids,and all organisms use the same set of 20 amino acids to make their proteins.But the amino acids are linked in different sequences, giving eachtype of protein molecule a different three-dimensional shape, or conformation,just as different sequences of letters spell different words. In thisway, the same basic biochemical machinery has served to generate thewhole gamut of life on Earth (Figure 1–3).Living Cells Are Self-Replicating Collections of CatalystsOne of the most commonly cited properties of living things is their abilityto reproduce. For cells, the process involves duplicating their geneticmaterial and other components and then dividing in two—producinga pair of daughter cells that are themselves capable of undergoing thesame cycle of replication.It is the special relationship between DNA, RNA, and proteins—asoutlined in the central dogma (see Figure 1–2)—that makes this selfreplicationpossible. DNA encodes information that ultimately directsthe assembly of proteins: the sequence of nucleotides in a molecule ofDNA dictates the sequence of amino acids in a protein. Proteins, in turn,catalyze the replication of DNA and the transcription of RNA, and theyparticipate in the translation of RNA into proteins. This feedback loopbetween proteins and polynucleotides underlies the self-reproducingbehavior of living things (Figure 1−4). We discuss this complex interdependencebetween DNA, RNA, and proteins in detail in Chapters 5through 8.In addition to their roles in polynucleotide and protein synthesis, proteinsalso catalyze the many other chemical reactions that keep the self-replicatingsystem shown in Figure 1–4 running. A living cell can break down(A)2 µm(B) (C) (D)Figure 1–3 All living organisms are constructed from cells. (A) A colony of bacteria, (B) a butterfly, (C) a rose, and (D) a dolphinare all made of cells that have a fundamentally similar chemistry and operate according to the same basic principles. (A, courtesyof Janice Carr; D, courtesy of Jonathan Gordon, IFAW.)ECB5 e1.03/1.03
Unity and Diversity of Cells5nucleotidesCATALYTICACTIVITYDNA and RNAproteinsSEQUENCEINFORMATIONamino acidsFigure 1–4 Life is an autocatalyticprocess. DNA and RNA provide thesequence information (green arrows) thatis used to produce proteins and to copythemselves. Proteins, in turn, provide thecatalytic activity (red arrows) needed tosynthesize DNA, RNA, and themselves.Together, these feedback loops create theself-replicating system that endows livingcells with their ability to reproduce.ECB5 n1.102-1.4nutrients and use the products to both make the building blocks neededto produce polynucleotides, proteins, and other cell constituents and togenerate the energy needed to power these biosynthetic processes. Wediscuss these vital metabolic reactions in detail in Chapters 3 and 13.Only living cells can perform these astonishing feats of self-replication.Viruses also contain information in the form of DNA or RNA, but they donot have the ability to reproduce by their own efforts. Instead, they parasitizethe reproductive machinery of the cells that they invade to makecopies of themselves. Thus, viruses are not truly considered living. Theyare merely chemical zombies: inert and inactive outside their host cellsbut able to exert a malign control once they gain entry. We review the lifecycle of viruses in Chapter 9.All Living Cells Have Apparently Evolved from the SameAncestral CellWhen a cell replicates its DNA in preparation for cell division, the copyingis not always perfect. On occasion, the instructions are corrupted bymutations that change the sequence of nucleotides in the DNA. For thisreason, daughter cells are not necessarily exact replicas of their parent.Mutations can create offspring that are changed for the worse (in thatthey are less able to survive and reproduce), changed for the better (inthat they are better able to survive and reproduce), or changed in a neutralway (in that they are genetically different but equally viable). The strugglefor survival eliminates the first, favors the second, and tolerates the third.The genes of the next generation will be the genes of the survivors.For many organisms, the pattern of heredity may be complicated by sexualreproduction, in which two cells of the same species fuse, poolingtheir DNA. The genetic cards are then shuffled, re-dealt, and distributedin new combinations to the next generation, to be tested again for theirability to promote survival and reproduction.These simple principles of genetic change and selection, applied repeatedlyover billions of cell generations, are the basis of evolution—theprocess by which living species become gradually modified and adaptedto their environment in more and more sophisticated ways. Evolutionoffers a startling but compelling explanation of why present-day cellsare so similar in their fundamentals: they have all inherited their geneticinstructions from the same common ancestral cell. It is estimated thatthis cell existed between 3.5 and 3.8 billion years ago, and we must supposethat it contained a prototype of the universal machinery of all life onEarth today. Through a very long process of mutation and natural selection,the descendants of this ancestral cell have gradually diverged to fillevery habitat on Earth with organisms that exploit the potential of themachinery in a seemingly endless variety of ways.QUESTION 1–2Mutations are mistakes in the DNAthat change the genetic plan fromthat of the previous generation.Imagine a shoe factory. Would youexpect mistakes (i.e., unintentionalchanges) in copying the shoedesign to lead to improvements inthe shoes produced? Explain youranswer.
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- Page 19 and 20: ContentsxviiThe Equilibrium Constan
- Page 21 and 22: ContentsxixCHAPTER 6DNA Replication
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- Page 33 and 34: ContentsxxxiGENETICS AS AN EXPERIME
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4 CHAPTER 1 Cells: The Fundamental Units of Life
nucleotides
DNA synthesis
REPLICATION
amino acids
RNA synthesis
TRANSCRIPTION
protein synthesis
TRANSLATION
DNA
RNA
PROTEIN
Figure 1–2 In all living cells, genetic
information flows from DNA to RNA
(transcription) and from RNA to protein
(translation)—an arrangement known
as the central dogma. The sequence of
nucleotides in a particular segment of
DNA (a gene) is transcribed into an RNA
molecule,
ECB5
which
e1.02/1.02
can then be translated into
the linear sequence of amino acids of a
protein. Only a small part of the gene, RNA,
and protein is shown.
organism reproduces. Thus, in every cell, long polymer chains of DNA
are made from the same set of four monomers, called nucleotides, strung
together in different sequences like the letters of an alphabet. The information
encoded in these DNA molecules is read out, or transcribed, into
a related set of polynucleotides called RNA. Although some of these RNA
molecules have their own regulatory, structural, or chemical activities,
most are translated into a different type of polymer called a protein. This
flow of information—from DNA to RNA to protein—is so fundamental to
life that it is referred to as the central dogma (Figure 1−2).
The appearance and behavior of a cell are dictated largely by its protein
molecules, which serve as structural supports, chemical catalysts,
molecular motors, and much more. Proteins are built from amino acids,
and all organisms use the same set of 20 amino acids to make their proteins.
But the amino acids are linked in different sequences, giving each
type of protein molecule a different three-dimensional shape, or conformation,
just as different sequences of letters spell different words. In this
way, the same basic biochemical machinery has served to generate the
whole gamut of life on Earth (Figure 1–3).
Living Cells Are Self-Replicating Collections of Catalysts
One of the most commonly cited properties of living things is their ability
to reproduce. For cells, the process involves duplicating their genetic
material and other components and then dividing in two—producing
a pair of daughter cells that are themselves capable of undergoing the
same cycle of replication.
It is the special relationship between DNA, RNA, and proteins—as
outlined in the central dogma (see Figure 1–2)—that makes this selfreplication
possible. DNA encodes information that ultimately directs
the assembly of proteins: the sequence of nucleotides in a molecule of
DNA dictates the sequence of amino acids in a protein. Proteins, in turn,
catalyze the replication of DNA and the transcription of RNA, and they
participate in the translation of RNA into proteins. This feedback loop
between proteins and polynucleotides underlies the self-reproducing
behavior of living things (Figure 1−4). We discuss this complex interdependence
between DNA, RNA, and proteins in detail in Chapters 5
through 8.
In addition to their roles in polynucleotide and protein synthesis, proteins
also catalyze the many other chemical reactions that keep the self-replicating
system shown in Figure 1–4 running. A living cell can break down
(A)
2 µm
(B) (C) (D)
Figure 1–3 All living organisms are constructed from cells. (A) A colony of bacteria, (B) a butterfly, (C) a rose, and (D) a dolphin
are all made of cells that have a fundamentally similar chemistry and operate according to the same basic principles. (A, courtesy
of Janice Carr; D, courtesy of Jonathan Gordon, IFAW.)
ECB5 e1.03/1.03