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S<strong>of</strong>tware <strong>and</strong> Technical<br />

Report Archive<br />

http://linus.nci.nih.gov/brb<br />

The BRB Website contains other s<strong>of</strong>tware,<br />

such as s<strong>of</strong>tware for the generation <strong>of</strong><br />

optimal <strong>and</strong> minimax two-stage phase II<br />

clinical trial designs <strong>and</strong> s<strong>of</strong>tware for<br />

managing dose administration for patients<br />

on accelerated titration design phase I<br />

designs. The Website also contains technical<br />

reports <strong>and</strong> PowerPoint presentations<br />

<strong>of</strong> talks given by BRB staff. The technical<br />

report <strong>and</strong> PowerPoint presentation<br />

sections are particularly rich in statistical<br />

genomics material <strong>and</strong> are accessed<br />

approximately 500 times per month.<br />

28 ■ P R O G R A M A C C O M P L I S H M E N T S 2 0 0 6<br />

Guidelines for Tumor<br />

Biomarker Studies<br />

Despite years <strong>of</strong> research <strong>and</strong> hundreds <strong>of</strong><br />

reports on tumor markers in oncology, the<br />

number <strong>of</strong> markers that have emerged as<br />

clinically useful is pitifully small. Often,<br />

initial studies <strong>of</strong> a marker show great<br />

promise, but subsequent studies on the<br />

same or related markers yield inconsistent<br />

conclusions or st<strong>and</strong> in direct contradiction<br />

to the promising results.<br />

The development <strong>of</strong> guidelines for the<br />

reporting <strong>of</strong> tumor marker studies was<br />

a major recommendation <strong>of</strong> the <strong>NCI</strong>-<br />

European Organisation for Research <strong>and</strong><br />

<strong>Treatment</strong> <strong>of</strong> <strong>Cancer</strong> at the First International<br />

Meeting on <strong>Cancer</strong> Diagnostics<br />

in 2000. BRB collaborated with CDP staff<br />

<strong>and</strong> extramural statisticians to develop<br />

publication guidelines for the REporting<br />

<strong>of</strong> tumor MARKer studies (REMARK) to<br />

provide relevant information about the<br />

study design, prespecified hypotheses,<br />

patient <strong>and</strong> specimen characteristics, assay<br />

methods, <strong>and</strong> statistical analysis methods.<br />

The goal <strong>of</strong> these guidelines is to encourage<br />

transparent <strong>and</strong> complete reporting<br />

so that the relevant information will be<br />

available to others to help them judge the<br />

usefulness <strong>of</strong> the data <strong>and</strong> underst<strong>and</strong> the<br />

context in which the conclusions apply.<br />

The REMARK guidelines were published<br />

in the Journal <strong>of</strong> Clinical Oncology <strong>and</strong><br />

may be accessed through the journal’s<br />

Website: http://www.jco.org/cgi/content/<br />

full/23/36/9067. (McShane LM, Altman DG,<br />

Sauerbrei W, Taube SE, Gion M, Clark GM.<br />

Reporting recommendations for tumor<br />

marker prognostic studies. J Clin Oncol<br />

2005:23;9067–72.)

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