11th ICRS Abstract book - Nova Southeastern University

11th ICRS Abstract book - Nova Southeastern University 11th ICRS Abstract book - Nova Southeastern University

24.12.2012 Views

Oral Mini-Symposium 16: Ecosystem Assessment and Monitoring of Coral Reefs - New Technologies and Approaches 16-46 Caribbean Shallow Reef Coral δ 15 n Variability Among Species And Depth Kirby WEBSTER 1 , Steve MACKO 1 , Kiho KIM* 2 1 Department of Environmental Sciences, University of Virginia, Charlottesville, VA, 2 Department of Biology, American University, Washington, DC Long-lived coral accumulate available nutrients as they grow, and have potential to provide a temporally integrated view of environmental conditions. Nitrogen stable isotope analysis has been a powerful tool for reconstructing inputs into aquatic ecosystems. Although isotope analysis has typically been used to infer sources of N, δ15N may also be used as a proxy for concentration of N and other inputs. However, use of any one species for such a proxy will limit the spatial and temporal extent over which the reconstruction can be addressed. Comparative analyses may be difficult if a species which is common to one area or depth is not observed in the location of interest, or if the proxy has seasonal variation. This study addresses the question as to whether a range of closely related species of the same taxa can be used in this regard. Stable nitrogen isotope analyses of Gorgoniidae family corals were measured to determine the variation among a range of species and with increasing depth in the water column. Gorgonians are common to many shallow reefs in the Caribbean and thus represent an excellent test organism over which the observations at one location could then be extended to another location in a different gorgonian species. Isotope analyses of axial surface skeletal material revealed no significant variation in δ15N values within Gorgoniidae collected from the same reef indicating that observations on species within this taxa are interchangeable. However, in Pseudopterogorgia americana collected over a 9 m depth gradient, a significant variation with depth was observed (r 2 = 0.54, p < 0.0001) suggesting that depth must be kept constant across sampling locations. The results of this study, combined with knowledge of general abundance and N-rich axial skeleton, support the hypothesis that gorgonian corals are an ideal candidate species for use as environmental proxies. 16-47 Light Attenuation Measurements In Bermuda Reefs Gerardo TORO-FARMER* 1 , Burton JONES 2 1 Ocean Sciences, University of Southern California, Los Angeles, CA, 2 Marine Environmental Biology, University of Southern California, Los Angeles, CA The implementation of low cost and effective methodologies for long term monitoring programs in coral reefs is needed, especially in geographic areas where economic and scientific resources are limited. Specifically, in-situ optical measurements can be utilized to estimate light attenuation due to suspended particles from terrestrial runoff or resuspension of bottom sediments from navigation activities near coral reef areas. Spatial and temporal variations of light penetration and attenuation were estimated using two different methods: water column hyperspectral radiometric measurements, and long term deployments of low cost underwater light intensity logger sensors. These methods were compared at stations across the north reef in the Bermuda Islands. Existing radiative transfer models were also used to compare the observations from these sensors against theoretical values. Variations in the diffuse attenuation coefficient were found among the different stations and between seasons, suggesting temporal changes in the optical field due to natural and possibly anthropogenic disturbances. Regardless of the intrinsic differences between high end and low cost methodologies, the correct interpretation of data from these light intensity loggers can facilitate and improve monitoring and management of coral reef and other coastal ecosystems. 16-48 Mining ICON/CREWS Data Sets for Discovering Relationships between Environmental Factors and Coral Bleaching Marc BOUMEDINE* 1 1 University of the Virgin Islands, St. Thomas, Virgin Islands (U.S.) In order to assist researchers in assessing the impact of climate change on coral reefs, NOAA Integrated Coral Observing Network (ICON/CREWS) stations collect large amounts of in-situ oceanic and atmospheric data in the Caribbean region. Local effects of environmental factors such as sea temperature, wind speed and direction, light intensity, tides and water salinity on coral reef bleaching are determined by expert system technologies. Since expert knowledge is largely heuristic, the expert system knowledge base is constantly refined and enhanced as new axioms, theories or rules of thumb become available. Since expert systems can not learn independently, an approach to automatically extract new patterns and ultimately knowledge from historical ICON/CREWS data sets is proposed. In this study, patterns have been extracted from data sets generated by the Lee Stocking Islands (Bahamas) ICON/CREWS station from the May 21, 2005 till December 31, 2005. The Apriori association rules algorithm generates patterns in the form of rules such as: “if event ei occurs then event ej also occurs”. Frequent patterns are observed between Pulse Amplitude Modulation (PAM) yield and light intensity, such as photosynthetically active radiation (PAR). Additional relationships between PAM yield and salinity, as well and PAM yield and wind speed are derived. In addition to rule generation, two classifiers have been designed in an attempt to predict PAM yield values from environmental factors. Our preliminary results are encouraging since more than 85% of the test instances are correctly predicted with both neural network and decision tree algorithms. These preliminary results suggest that data mining techniques are valuable approaches for complementing existing coral bleaching predictive models. 16-49 The Reefpad: A Handheld Underwater Computer Aimed At Improving The Speed And Accuracy Of In-Situ Monitoring Of Coral Reefs Frederic CHARPENTIER* 1 , Peter GAYLE 2 , Bernadette CHARPENTIER 3 1 Duwatech, Ottawa, ON, Canada, 2 Center for Marine Sciences, Discovery Bay Marine Lab, Discovery Bay, Jamaica, 3 Research an Development, Duwatech, Ottawa, ON, Canada Coral reef monitoring is a labor and time-intensive process with inherent challenges related to increasing spatio-temporal resolution. It requires the collection of various data ranging from individual counts to photo surveys. The collected data needs subsequent transcription and processing. The hardware used today to conduct coral monitoring ranges from pencils and slates to photo cameras and other ad hoc instruments which are usually adequate but poorly integrated. The ReefPad is a low-cost handheld underwater computing device specifically designed to simplify in-situ work by decreasing data collection time while improving the accuracy and quantity of the collected data. The electronic circuitry is housed in a 10 x 16.5 cms. acrylic cylinder rated to a depth of 70 meters. It houses a main computer based on an ARM micro-processor, in addition to a PIC microcontroller, a number of sensors (depending on variables being investigated) and a 10 cms. color screen. The basic sensor configuration includes a 3-axis magnetometer and two dual-axis accelerometers. The device can also be custom fitted with digital cameras, lasers, photometers, temperature sensors and RFID readers. The accelerometers and the magnetometer allow the use of dead reckoning for underwater navigation after an initial GPS calibration at the surface prior to the dive. The motion sensors also allow the researcher to interact with the software using gestures thus eliminating the need for buttons, keyboards or writing surfaces. The graphical user interface of the ReefPad was specifically designed to facilitate immediate access to maps, hierarchical lists and referencing software through simple hand motions. The software is configurable and designed to support existing methodologies while decreasing collection times, increasing data accuracy and broadening the investigative scope. 139

Oral Mini-Symposium 16: Ecosystem Assessment and Monitoring of Coral Reefs - New Technologies and Approaches 16-50 Variations in The Symbiotic Algae (Zooxanthellae) Associated With Dominant Scleractinian Corals in Hong Kong Sar, China Yu Man TSANG * 1 , Put ANG 2 1 Marine Science Laboratory, Department of Biology, The Chinese University of Hong Kong, Hong Kong, Hong Kong, 2 Marine Science Laboratory, Department of Biology, The Chinese University of Hong Kong, Shatin, Hong Kong Hong Kong is a marginal environment for coral growth. This study aims at investigating the potential linkages between variation in environmental parameters (mainly seawater temperature) and variation in symbiotic algal density, chlorophyll content (chlorophyll a and c2) and the photosynthetic capacity of two dominant Hong Kong corals Porites lutea and Platygyra acuta. The phylogenetic information on Symbiodinium associated with Platygyra acuta was also examined based on restriction fragment length polymorphism (RFLP). Seasonal photophysiological parameters of algal symbionts in P. acuta and P. lutea were monitored from October 2006 to April 2007 at A Ye Wan and A Ma Wan in Tung Ping Chau Marine Park. Investigation on their zooxanthellae density and pigment contents throughout the 18 months sampling period revealed no significant bleaching occurring in these corals. However, significant temporal variations in the zooxanthellae density (from 2 × 10 6 to 10 × 10 6 cells cm -2 of coral surface area) for both species were recorded. Concentrations of chlorophyll a per zooxanthella were significantly higher in winter than in summer for both species (ANOVA and Kruskal Wallis Test, p < 0.05). Molecular phylotyping showed Symbiodinium clade C to be the dominant zooxanthellae associated with P. acuta irrespective of their location (i.e., top or shaded region) in the coral host. Symbiodinium clade C formed a stable association with this coral host over the sampling period. This result supported the finding that Symbiodinium clade C is the major clade of zooxanthellae associated with scleractinian corals in the Pacific. 16-51 Large Scale Coral Mortality in Barbados: A Delayed Response to the 2005 Bleaching Episode Hazel OXENFORD* 1 , Angelique BRATHWAITE 2 , Ramon ROACH 2 1 Centre for Resource Management and Environmental Studies, University of the West Indies, Cave Hill, Barbados, 2 Coastal Zone Management Unit, Ministry of Energy and the Environment, Bridgetown, Barbados In common with many Caribbean countries, coral reefs in Barbados suffered significant bleaching during the high temperature event of late summer 2005. Six reef sites, including shallow (< 10 m) and deep (> 15 m) communities were monitored over the following year (October 2005 – November 2006) to determine mortality impacts and rate of recovery from the bleaching event. Quantitative benthic surveys along five 1 x 20 m band transects and five 20 m line transects at each site, were undertaken every four months. Bleached condition (measured as % of colonies fully or partially bleached) gradually dropped from a mean of 71% in October 2005, 38% in February to 17% in June, before rising again to 25% in November 2006 after summer warming. Coral mortality (measured using two independent indices: estimated % of coral colony surface recently dead; and % of benthic coral cover recently dead) remained surprisingly low for most species five months after the onset of bleaching (means: 3.8% colony surface dead; or 4.8% dead cover), but rose sharply after 10 months (means: 18.7% colony surface; or 25.9% cover), eventually declining after 15 months to a near ambient levels (means: 2.0% colony surface; or 6.1% cover). In common with other eastern Caribbean islands, recovery from bleached condition was slow, persisting for many months after water temperatures had cooled, and overall mortality impact was high on both deep and shallow reefs. In contrast were the delayed onset of significant mortality and the low incidence of coral disease following the bleaching event on Barbados reefs. High losses in live coral cover have significant economic implications for the island which derives a major proportion of its GDP from tourism, and relies heavily on healthy reefs for coastal protection. This emphasises the extreme vulnerability of small Caribbean islands to the global warming trend. 140

Oral Mini-Symposium 16: Ecosystem Assessment and Monitoring of Coral Reefs - New Technologies and Approaches<br />

16-46<br />

Caribbean Shallow Reef Coral δ 15 n Variability Among Species And Depth<br />

Kirby WEBSTER 1 , Steve MACKO 1 , Kiho KIM* 2<br />

1 Department of Environmental Sciences, <strong>University</strong> of Virginia, Charlottesville, VA,<br />

2 Department of Biology, American <strong>University</strong>, Washington, DC<br />

Long-lived coral accumulate available nutrients as they grow, and have potential to<br />

provide a temporally integrated view of environmental conditions. Nitrogen stable<br />

isotope analysis has been a powerful tool for reconstructing inputs into aquatic<br />

ecosystems. Although isotope analysis has typically been used to infer sources of N,<br />

δ15N may also be used as a proxy for concentration of N and other inputs. However, use<br />

of any one species for such a proxy will limit the spatial and temporal extent over which<br />

the reconstruction can be addressed. Comparative analyses may be difficult if a species<br />

which is common to one area or depth is not observed in the location of interest, or if the<br />

proxy has seasonal variation. This study addresses the question as to whether a range of<br />

closely related species of the same taxa can be used in this regard. Stable nitrogen isotope<br />

analyses of Gorgoniidae family corals were measured to determine the variation among a<br />

range of species and with increasing depth in the water column. Gorgonians are common<br />

to many shallow reefs in the Caribbean and thus represent an excellent test organism over<br />

which the observations at one location could then be extended to another location in a<br />

different gorgonian species. Isotope analyses of axial surface skeletal material revealed<br />

no significant variation in δ15N values within Gorgoniidae collected from the same reef<br />

indicating that observations on species within this taxa are interchangeable. However, in<br />

Pseudopterogorgia americana collected over a 9 m depth gradient, a significant variation<br />

with depth was observed (r 2 = 0.54, p < 0.0001) suggesting that depth must be kept<br />

constant across sampling locations. The results of this study, combined with knowledge<br />

of general abundance and N-rich axial skeleton, support the hypothesis that gorgonian<br />

corals are an ideal candidate species for use as environmental proxies.<br />

16-47<br />

Light Attenuation Measurements In Bermuda Reefs<br />

Gerardo TORO-FARMER* 1 , Burton JONES 2<br />

1 Ocean Sciences, <strong>University</strong> of Southern California, Los Angeles, CA, 2 Marine<br />

Environmental Biology, <strong>University</strong> of Southern California, Los Angeles, CA<br />

The implementation of low cost and effective methodologies for long term monitoring<br />

programs in coral reefs is needed, especially in geographic areas where economic and<br />

scientific resources are limited. Specifically, in-situ optical measurements can be utilized<br />

to estimate light attenuation due to suspended particles from terrestrial runoff or<br />

resuspension of bottom sediments from navigation activities near coral reef areas. Spatial<br />

and temporal variations of light penetration and attenuation were estimated using two<br />

different methods: water column hyperspectral radiometric measurements, and long term<br />

deployments of low cost underwater light intensity logger sensors. These methods were<br />

compared at stations across the north reef in the Bermuda Islands. Existing radiative<br />

transfer models were also used to compare the observations from these sensors against<br />

theoretical values. Variations in the diffuse attenuation coefficient were found among the<br />

different stations and between seasons, suggesting temporal changes in the optical field<br />

due to natural and possibly anthropogenic disturbances. Regardless of the intrinsic<br />

differences between high end and low cost methodologies, the correct interpretation of<br />

data from these light intensity loggers can facilitate and improve monitoring and<br />

management of coral reef and other coastal ecosystems.<br />

16-48<br />

Mining ICON/CREWS Data Sets for Discovering Relationships between Environmental<br />

Factors and Coral Bleaching<br />

Marc BOUMEDINE* 1<br />

1 <strong>University</strong> of the Virgin Islands, St. Thomas, Virgin Islands (U.S.)<br />

In order to assist researchers in assessing the impact of climate change on coral reefs, NOAA<br />

Integrated Coral Observing Network (ICON/CREWS) stations collect large amounts of in-situ<br />

oceanic and atmospheric data in the Caribbean region. Local effects of environmental factors<br />

such as sea temperature, wind speed and direction, light intensity, tides and water salinity on<br />

coral reef bleaching are determined by expert system technologies. Since expert knowledge is<br />

largely heuristic, the expert system knowledge base is constantly refined and enhanced as new<br />

axioms, theories or rules of thumb become available. Since expert systems can not learn<br />

independently, an approach to automatically extract new patterns and ultimately knowledge<br />

from historical ICON/CREWS data sets is proposed. In this study, patterns have been extracted<br />

from data sets generated by the Lee Stocking Islands (Bahamas) ICON/CREWS station from<br />

the May 21, 2005 till December 31, 2005. The Apriori association rules algorithm generates<br />

patterns in the form of rules such as: “if event ei occurs then event ej also occurs”. Frequent<br />

patterns are observed between Pulse Amplitude Modulation (PAM) yield and light intensity,<br />

such as photosynthetically active radiation (PAR). Additional relationships between PAM yield<br />

and salinity, as well and PAM yield and wind speed are derived. In addition to rule generation,<br />

two classifiers have been designed in an attempt to predict PAM yield values from<br />

environmental factors. Our preliminary results are encouraging since more than 85% of the test<br />

instances are correctly predicted with both neural network and decision tree algorithms. These<br />

preliminary results suggest that data mining techniques are valuable approaches for<br />

complementing existing coral bleaching predictive models.<br />

16-49<br />

The Reefpad: A Handheld Underwater Computer Aimed At Improving The Speed And<br />

Accuracy Of In-Situ Monitoring Of Coral Reefs<br />

Frederic CHARPENTIER* 1 , Peter GAYLE 2 , Bernadette CHARPENTIER 3<br />

1 Duwatech, Ottawa, ON, Canada, 2 Center for Marine Sciences, Discovery Bay Marine Lab,<br />

Discovery Bay, Jamaica, 3 Research an Development, Duwatech, Ottawa, ON, Canada<br />

Coral reef monitoring is a labor and time-intensive process with inherent challenges related to<br />

increasing spatio-temporal resolution. It requires the collection of various data ranging from<br />

individual counts to photo surveys. The collected data needs subsequent transcription and<br />

processing. The hardware used today to conduct coral monitoring ranges from pencils and slates<br />

to photo cameras and other ad hoc instruments which are usually adequate but poorly<br />

integrated. The ReefPad is a low-cost handheld underwater computing device specifically<br />

designed to simplify in-situ work by decreasing data collection time while improving the<br />

accuracy and quantity of the collected data. The electronic circuitry is housed in a 10 x 16.5<br />

cms. acrylic cylinder rated to a depth of 70 meters. It houses a main computer based on an<br />

ARM micro-processor, in addition to a PIC microcontroller, a number of sensors (depending on<br />

variables being investigated) and a 10 cms. color screen. The basic sensor configuration<br />

includes a 3-axis magnetometer and two dual-axis accelerometers. The device can also be<br />

custom fitted with digital cameras, lasers, photometers, temperature sensors and RFID readers.<br />

The accelerometers and the magnetometer allow the use of dead reckoning for underwater<br />

navigation after an initial GPS calibration at the surface prior to the dive. The motion sensors<br />

also allow the researcher to interact with the software using gestures thus eliminating the need<br />

for buttons, keyboards or writing surfaces. The graphical user interface of the ReefPad was<br />

specifically designed to facilitate immediate access to maps, hierarchical lists and referencing<br />

software through simple hand motions. The software is configurable and designed to support<br />

existing methodologies while decreasing collection times, increasing data accuracy and<br />

broadening the investigative scope.<br />

139

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