Book of Abstracts, SPOC 2017
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Avans University <strong>of</strong> Applied Sciences<br />
Lovensdijkstraat 61-63<br />
4818 AJ Breda<br />
Postbus 90.116, 4800 RA Breda<br />
Receptie 088 – 525 75 00<br />
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Dear reader,<br />
We present here the <strong>Book</strong> <strong>of</strong> <strong>Abstracts</strong> for the <strong>SPOC</strong> (Specialisatie Polymeer- en Organische<br />
Chemie) minor from ATGM (The Academy for Technology <strong>of</strong> Health and Environment) <strong>of</strong> Avans<br />
Hogeschool in Breda.<br />
In this book <strong>of</strong> abstract you can find a brief description <strong>of</strong> the 44 research projects that are<br />
currently being carried out by the candidates to specialize in Organic and Polymer Chemistry.<br />
The topics <strong>of</strong> research span form the green synthesis <strong>of</strong> monomers for biobased-polymers or<br />
the application <strong>of</strong> new polymerization techniques, to the synthesis <strong>of</strong> biomimetic systems for<br />
the photodynamic therapy <strong>of</strong> cancer, bioimaging, peptides for gas phase studies and water<br />
oxidation catalysis.<br />
Every year ATGM students enthusiastically work on their specialization projects for 20 weeks<br />
during which they deepen their knowledge <strong>of</strong> organic chemistry and the management <strong>of</strong> a small<br />
research projects commissioned by different companies and universities, or research institutes<br />
in the Netherlands and abroad.<br />
We invite you to come to the poster session on June 28th in LD022 where you will be able to<br />
meet and discuss with the students responsible for their own research, their results and insights<br />
on their topics.<br />
We wish you enjoy the poster presentation and this book <strong>of</strong> abstracts and we hope to be able<br />
to welcome you on June 28th .<br />
Yours sincerely,<br />
Annabelle, Justin, Koen and Paula<br />
“The <strong>Book</strong> <strong>of</strong> <strong>Abstracts</strong> Committee”<br />
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Bart van den Broek<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Sonny van Seeters<br />
According to the biobased lecture, research must be done to biobased monomers for example styrene. In this<br />
research it will look at different techniques to make block-co-polymers <strong>of</strong> styrene and another monomer. A wellknown<br />
technique to make such block-co-polymers is by using a RAFT agent [1]. By using RAFT agent the properties<br />
<strong>of</strong> the polymers can affected. Think <strong>of</strong> de Mn, PDI and Tg <strong>of</strong> the polymers. The only drawback is that while using a<br />
RAFT agent for the polymerization it will cost a lot <strong>of</strong> money to purchase a RAFT agent.<br />
The goal <strong>of</strong> this research is to synthesize one or more RAFT agent which also could be used for RAFT<br />
polymerization. Expected is that a minimum <strong>of</strong> 1 RAFT agent successfully will be synthesized and purified for a<br />
RAFT polymerization.<br />
Keywords: Polymerization • RAFT polymerization • RAFT agent<br />
[1] Coenraad, W. H. (2013). Frankrijk Patent No. 11306648.4<br />
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John Schrauwen<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Sonny Van Seeters, Lectoraat Biobased Products<br />
Commissioned by the lectorate Biobased Products was to gather information and experience with the controlled<br />
radical polymerization technique Atom Transfer Radical Polymerization. During this project styrene and n-butyl<br />
acrylate were (co-)polymerized using Cu(I)Br and PMDETA as catalyst and the use <strong>of</strong> mono and bifunctional<br />
initiators in ethyl acetate or toluene in a closed and deoxygenated system. Reaction conversion determined<br />
gravimetrically with attempts to use HPLC and GC and resulting polymers were analysed with GPC and DSC.<br />
Keywords: SARA ATRP • Cu(0) • Ethyl acetate.<br />
[1] Peng, C. et al.(2014)”AGET and SARA ATRP <strong>of</strong> styrene and methyl methacrylate mediated by<br />
pyridyl-imine based copper complexes”, European Polymer Journal, 51, 1, 12-20.<br />
[2] Matyjaszewski, K. & Xia, J. (2001)”Atom Transfer Radical Polymerization”, Chemical Reviews, 101,<br />
9 , 2921- 2990.<br />
[3] Matyjaszewski, K. (2012)”Atom Transfer Radical Polymerization (ATRP): Current Status and Future<br />
Perspectives”, Macromolecules, 45, 10, 4015-4039.<br />
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Sam Compiet<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Sonny van Seeters<br />
Now a days most <strong>of</strong> the monomers used for polymerizations are produced in the petrochemical sector. The<br />
Research group for Biobased Products, at Avans University <strong>of</strong> Applied Sciences, is doing research on developing<br />
monomers that are based on natural products. When the Research group can achieve to produce biobased<br />
monomers they have to be sure that those monomers can be used to be polymerized. In this research, emulsion<br />
polymerisation will be investigated in different types: Conventional Emulsion polymerisation, mini-emulsion<br />
polymerization and, RAFT mini-emulsion. The different techniques are compared to see what is the best technique<br />
to polymerize the biobased monomers. Before using the biobased monomers, styrene and butyl acrylate are used<br />
to get an impression how well the different emulsion polymerization techniques work. Five emulsion<br />
polymerisations and three mini-emulsion polymerizations are executed. Each polymerisation is different from<br />
each other on one or two variables. These polymerizations are analysed with Differential Scanning Calorimetry<br />
(DSC) and Size Exclusion Chromatography (SEC). By comparing the GPC results it showed that in both emulsion<br />
and mini-emulsion the PDI was lower when a controlled transfer agent (CTA) was used. Also in mini-emulsion the<br />
PDI was lower under RAFT conditions than under normal mini-emulsion conditions. DSC showed that the Tg <strong>of</strong><br />
polystyrene polymers were between 103.38 and 110.03°C. It also showed that a polystyrene-co-butyl acrylaat is<br />
formed, with a Tg <strong>of</strong> 39.66°C. Both techniques can be used to polymerize, at this moment only mini-emulsion can<br />
be used to polymerize under RAFT conditions.<br />
[1] M. Oliveira, S. L. Behrends, I. R. Rosa, C. L. Petzhold, “Use <strong>of</strong> a Trithiocarbonyl RAFT Agent without<br />
Modification as (Co)Stabilizer in Miniemulsion Polymerization”, Journal <strong>of</strong> Polymer Science, part A: Polymer<br />
Chemistry, <strong>2017</strong>, 00, 000-000<br />
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Thomas Broers<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Sonny van Seeters<br />
Green chemistry is an important subject for the future. In the plastic industry loads <strong>of</strong> plastic are made out <strong>of</strong><br />
harmful substances. The substances aren’t environmental friendly. A possible solution is the use <strong>of</strong> biobased<br />
monomers, these monomers don’t always have the same characteristics. RAFT polymerization is a controlled<br />
polymerization where different monomers can be coupled in blocks which influences the characteristics by using<br />
different monomers. This research is the first step in the investigation <strong>of</strong> using biobased monomers combined<br />
with RAFT polymerization. The focus will be on the kinetics <strong>of</strong> the RAFT polymerization and comparison between<br />
harmful and biobased monomers.<br />
Keywords: RAFT • styrene • butylacrylate • biobased • kinetics<br />
A co-polymer is already obtained shown by the lowered Glass transition temperature(Tg). The original styrene<br />
Tg was 110°C , the Tg 34°C shows the coupling <strong>of</strong> butylacrylate due the RAFT mechanism.<br />
[1] W.C. Bear, “RAFT polymerization <strong>of</strong> poly(butyalacrylate) homopolymer and block coplolymers: kinetics and<br />
pressure-sensitive adhesive characterization”, ongepubliceerd eindwerk, University <strong>of</strong> North Carolina<br />
Wilmington, Wilmington, 2011.<br />
[2] B. Ebeling en P. Vana, “Multiblock Copolymers <strong>of</strong> Styrene and Butyl Acrylate via Polytrithiocarbonate-<br />
Mediated RAFT Polymerization”, Polymers, Vol. 3, pp. 719-739, Maart 2011.<br />
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Thomas Timmermans<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Sonny van Seeters<br />
The Biobased lectoraat is researching monomers derived from natural products. When the monomers are been<br />
create, they must be able to polymerize. Free radical polymerizations are tested and working with 4-<br />
acetoxystyrene, but controlled polymerizations as RAFT and ATRP are not widely discussed. This research is done<br />
to create block-copolymers with RAFT and ATRP, this part <strong>of</strong> the research is about create the RAFT-agent, because<br />
RAFT-agents are very expensive molecules. Probably because purify the molecule is a hard part <strong>of</strong> the synthesis.<br />
The synthesis <strong>of</strong> the RAFT-agent is performed with potassium tert-butoxide, n-dodecanethiol, carbon disulfide,<br />
iodine and heptane and THF as solvent. The product will be analyzed with FTIR, NMR, HPLC and LC-MS.<br />
Keywords: Polymerization • controlled polymerization • RAFT-agent • FTIR • NMR • HPLC • LC-MS<br />
Reaction <strong>of</strong> n-dodecylthiol with carbon disulfied<br />
Coupling with iodine<br />
Reaction with AIBN<br />
[1] Destarac, M. (2011). On the Critical Role <strong>of</strong> RAFT Agent Design in Reversible Addition-Fragmentation Chain<br />
Transfer (RAFT) Polymerization. Polymer Reviews, 51(2), 163–187.<br />
http://doi.org/10.1080/15583724.2011.568130<br />
[2] Ponnusamy, K., Babu, R. P., & Dhamodharan, R. (2013). Synthesis <strong>of</strong> block and graft copolymers <strong>of</strong> styrene<br />
by raft polymerization, using dodecyl-based trithiocarbonates as initiators and chain transfer agents. Journal<br />
<strong>of</strong> Polymer Science Part A: Polymer Chemistry, 51(5), 1066–1078. http://doi.org/10.1002/pola.26466<br />
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Tim Zoontjens<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Sonny van Seeters<br />
Chain growth polymerization is a polymerization technique that makes 80% <strong>of</strong> the synthetic polymers. Radical<br />
polymerization is by far the most widely used technique in this area. The result <strong>of</strong> this technique is a large<br />
distribution <strong>of</strong> molecular weights with a large difference in polymer lengths. However, the limits <strong>of</strong> free-radical<br />
polymerization are small variations <strong>of</strong> monomers, which can be used, and block copolymers can’t be polymerized<br />
with this radical polymerization.<br />
For this reason, research will be done on a controlled polymerization technique, atom transfer radical<br />
polymerization. This allows polymers to be synthesized with a low PDI (polydispersity) value and predetermined<br />
molecular weights and glass rubber transfer temperatures.<br />
The purpose is to synthesize different block copolymers with the monomers styrene, 4-acetoxystyrene, butyl<br />
acrylate and methyl acrylate using the catalyst CuBr and the ligand N ', N', N, N '' , N "-<br />
pentamethyldiethylenetriamine with initiator dimethyl 2,6-dibromoheptanedioate and bromoacetonitrile and<br />
using toluene as solvent. The aim is to analyze these different polymers with HPLC (conversion), SEC (molecular<br />
weight) and DSC (glass rubber transition temperature).<br />
Polymers with low PDI values and conversions below 100%, around 90% are expected. In addition, a linear<br />
relationship between the conversion and de molar mass is expected.<br />
Keywords: Block copolymers • Atomic transfer radical polymerization • High-performance liquid chromatography<br />
• Differential scanning calorimetry • Size exclusion chromatography<br />
[1] Matyjaszewski, K en Beers K. L. “Controlled/Living Radical Polymerization in the Undergraduate<br />
Laboratories. 2. Using ATRP in Limited Amounts <strong>of</strong> Air to Prepare Block and Statistical Copolymers <strong>of</strong> n-Butyl<br />
Acrylate and Styrene”, journal <strong>of</strong> Chemical Education, vol. 78, No. 4, pp. 547-550, 2011.<br />
[2] Davis, K. A. En Matyjaszewski, K., “Atom transfer radical polymerization <strong>of</strong> tert-butyl acrylate and<br />
preparation <strong>of</strong> block copolymers”, Journal <strong>of</strong> macromolecules, vol. 33, pp. 4039-4047, 2000.<br />
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Finn Adema<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Jack van Schijndel & Dennis Molendijk<br />
One <strong>of</strong> the principles <strong>of</strong> Green Chemistry is removing or limiting solvent. Last year [1,2], it was proven that cinnamic<br />
acid and p-coumaric acid form dimers under the influence <strong>of</strong> UV-light. The aim <strong>of</strong> this research was to measure<br />
the speed <strong>of</strong> conversion <strong>of</strong> para-substituted cinnamic acids derivatives under influence <strong>of</strong> UV-light. The<br />
investigated cinnamic acids were p-coumaric acid, 4-methoxycinnamic acid and 4-fluorocinnamic acid. It was<br />
expected that p-coumaric acid form dimers the fastest, followed by 4-methoxy and finally 4-fluorocinnamic acid.<br />
The research starts with a Knoevenagel condensation <strong>of</strong> the benzaldehydes that forms the investigated cinnamic<br />
acids. After the cinnamic acids are synthesized, the cycloaddition is preformed and measured with melting point<br />
and TLC. If the cinnamic acid derivative forms into a dimer, the conversion will be determined with HPLC, IR and<br />
NMR.<br />
Keywords: Solvent free chemistry UV light, cinnamic acids<br />
[1] M. van Steen ‘’Fotodimerisatie van kaneelzuurderivaten’’, 2016<br />
[2] B. Snijders ‘’ Dimerisatie van kaneelzuur(derivaten) onder invloed van UV licht’’, 2016<br />
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Maarten Harijgens<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Avans Biopolymergroup & Technical university Eindhoven (TUE)<br />
Coumarins are an important group <strong>of</strong> aromatic compounds which can exhibit a broad biological activity. The<br />
target molecule 7,8 dihydroxycoumarin , commonly known as daphnetin, excels as an anticoagulant, antioxidant,<br />
rat-poison, possible antitumoral and as a protein kinase inhibitor. [1][2] The current synthesis is trough expensive<br />
and environmental unfriendly method, with solvents like piperidine and pyridine. For this reason the Avans<br />
bioplymergroup and TUE has created a greener alternative to these chemical reactions. The main reaction utilize<br />
the Knoevenagel condensation to synthesis coumarins from benzaldehydes and malonic acid. To aid them in<br />
their research, the main goal for this minor project is to synthesise Daphnetin sticking to the general reaction<br />
route without making drastic changes. The set hypothesis Is to successfully synthesise Daphnetin on mild<br />
temperatures without disintegrating the desired product. To achieve the set goal, the following method is used:<br />
2,3,4 trihydroxybenzaldehyde reacts with malonic acid through a Knoenenagel condensation under mild<br />
conditions, whereas ammonium bicarbonate acts as catalyst for 4 hours on 60 0 C. this synthesis results in<br />
7,8dihydroxy-3carboxycoumarin which is decarboxylated through an Adams carboxylation. This will result in the<br />
desired product Daphnetin. [3] In the end, the total cost <strong>of</strong> synthesis will be around 20 euro per 0,5 – 1 gram, if<br />
successful. This a fairly cheap in comparison to the selling price <strong>of</strong> Daphnetin at Sigma Aldrich, which is 336 euro<br />
for 25 mg. [4]<br />
Keywords: Knoevenagel condensation • coumarines • daphentin<br />
[1] Daphnetin, one <strong>of</strong> coumarin derivatives, is a protein kinase inhibitor. Yang EB, Zhao YN, Zhang K, Mack P.<br />
Biochem Biophys Res Commun. 1999 Jul 14<br />
[2] Differential effects <strong>of</strong> esculetin and daphnetin on in vitro cell proliferation and in vivo estrogenicity. Jiménez-<br />
Orozco FA 1 , et al, Eur J Pharmacol. 2011 Oct 1<br />
[3] A Green Chemical Synthesis <strong>of</strong> 3-Carboxycoumarins and 3,4-unsubstituted Coumarins, Jack van<br />
Schijndelab*, Luiz Alberto Canallea, Dennis Molendijka, Jan Meuldijkb , to be published.<br />
[4] link to sigma aldrich: http://www.sigmaaldrich.com/catalog/product/sigma/d5564?lang=en®ion=NL<br />
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Mike Boessen<br />
ATGM Academy <strong>of</strong> Technology, Health- and life Sciences<br />
Avans University <strong>of</strong> Applied Sciences, Breda<br />
Avans Biopolymers Group, Eindhoven University <strong>of</strong> Technology<br />
Coumarins have a broad range <strong>of</strong> biological activity in different organisms and are most commonly used in<br />
medication (anticoagulants), antioxidants, antifungals, rodenticides and even in cosmetics and foods.<br />
The current general synthesis pathway is a non-environmentally friendly method. In this age green chemistry is<br />
becoming an ever more important cornerstone <strong>of</strong> science and this experiment will thus focus itself on altering the<br />
synthesis route <strong>of</strong> coumarins to a more green route, which includes a green version <strong>of</strong> the Knoevenagel<br />
condensation.<br />
The main goal <strong>of</strong> this research is to synthesize ethyl 2-oxochromen-3-carboxylate, coumarin and an intermediate<br />
in the synthesis <strong>of</strong> coumarin via a green Knoevenagel condensation from 2-hydroxybenzaldehy and, respectively,<br />
diethylmalonate or malonic acid using ammonium bicarbonate as promotor.<br />
Mass Spectrometric analysis has verified the synthesis <strong>of</strong> both ethyl-3-coumarincarboxylate and its intermediate<br />
which are both shown the table <strong>of</strong> content with their mass spectra.<br />
Keywords: Green chemistry • Knoevenagel condensation • coumarin • ethyl-3-coumarincarboxylate<br />
[1] A. Shaabani, R. Ghadari, A. Rahmati and R. A. H., “Coumarin Synthesis via Knoevenagel Condensation<br />
Reaction in 1,1,3,3-N,N,N',N'Tetramethylguanidinium Trifluoroacetate Ionic Liquid,” Journal <strong>of</strong> the Iranian<br />
Chemical Society, no. 6, pp. 710-714, 2009.<br />
[2] A E. Knoevenagel, “Ueber eine Darstellungsweise der Glutarsäure,” European Journal <strong>of</strong> Unorganic chemisry,<br />
vol. 2, no. 27, pp. 2345-2346, 1894.<br />
[3] D. Bogdal, “Coumarins: Fast Synthesis by Knoevenagel,” Journal <strong>of</strong> Chemical Research, no. 8, pp. 468-469,<br />
1998.<br />
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Mike Nuiten<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Jack van Schijndel<br />
In a study <strong>of</strong> Jack van Schijndel, The Green Knoevenagel condensation reaction is tested for the synthesis <strong>of</strong><br />
synapinic acid. The action is proven after which this same synthesis is used in this study for the synthesis <strong>of</strong><br />
coumarin derivatives. The goal is to prove that the synthesis route works for as many derivatives as possible. The<br />
research shows that the synthesis works for R1 to R4 = H and in addition, also R1 = OH, R2 to 4 = H.<br />
In addition to traditional synthesis with malonic acid, the use <strong>of</strong> the alternative Meldrum's Acid (cyclic form <strong>of</strong><br />
malonic acid) is tested and proven.<br />
Keywords: Coumarine derivatives • Green Knoevenagel • Malonic Acid • Salicylaldehyde • Meldrum’s Acid<br />
HO<br />
O<br />
O<br />
+<br />
OH<br />
R 4 O<br />
R 4<br />
R 3 H<br />
R 3<br />
NH 4<br />
HCO 3<br />
R 2 OH 180 °C<br />
R 2<br />
R 1<br />
R 1<br />
O O<br />
[1] L. A. C. J. S. J. M. Jack van Schijndel, „Conversion <strong>of</strong> Syringaldehyde to Sinapinic Acid through Knoevenagel-<br />
Doebner Condensation”. Research Group Biopolymers, Centre <strong>of</strong> Expertise BioBased Economy, Avans<br />
University <strong>of</strong> Applied Science, Breda, The Netherlands. Department <strong>of</strong> Chemical Engineering and Chemistry,<br />
Lab <strong>of</strong> Chemical Reactor Engineering/Polymer Reaction Engineering, Eindhoven..<br />
[2] V. A. T. S. G. ⇑. F. E. Serena Fiorito, „A green chemical synthesis <strong>of</strong> coumarin-3-carboxylic and cinnamic acids<br />
using crop-derived products and waste waters as solvents”. Patent Department <strong>of</strong> Pharmacy, University ‘G.<br />
d’Annunzio’ <strong>of</strong> Chieti-Pescara, Via dei Vestini 31, 66100 Chieti Scalo, CH, Italy.<br />
[3] D. Bogdal, „Coumarins Fast Synthesis by the Knoevenagel Condensation under Microwave<br />
Irradiation.”. Patent Institute <strong>of</strong> Organic Chemistry, Politechnika Krakowska ul. Warszawska 24,<br />
31155 Krakow, Poland;<br />
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Remon Heemskerk<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Jack van Schijndel, Dennis Molendijk<br />
One <strong>of</strong> the principles <strong>of</strong> “Green Chemistry” is the limitation <strong>of</strong> solvent or solvent free reaction. In previous<br />
researches showed that cinnamic acid derivatives can react in an [2+2] cycloaddition under the influence <strong>of</strong> UV<br />
light without solvent. In these paper cinnamic acid, ferulic acid, sinapic acid and p-coumaric acid were investigated.<br />
These compounds were radiated with UV A light with a wavelength varying between 320 and 420 nm. p-Coumaric<br />
acid and cinnamic acid both reached a 100% conversion to its dimer. This was confirmed with DSC, FTIR and H-<br />
NMR analysis. [1] [2] This project is focused on the synthesis <strong>of</strong> different functional groups in cinnamic acid<br />
derivatives. In this research methylthiocinnamic acid and 4-biphenylcinnamic acid are investigated. p-Courmaric<br />
acid is also investigated in this research as a reference. [3]<br />
Keywords: Green chemistry • cinnamic acid • cycloaddition<br />
[1] B. Snijders, “Dimerisatie van kaneezuur(derivaten) onder invloed van UV licht,” Breda, 2016.<br />
[2] M. v. Steen, “Fotodimerisatie van kaneelzuurderivaten,” Breda, 2016.<br />
[3] K. Sugiyama, H. Takayanagi and E. Noguchi, “Substituent effect on the solid-state photochemistry <strong>of</strong><br />
cinnamic acid derivatives,” vol. 2003, no. 36, pp. 40-60, 2003.<br />
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Daan van de Velde<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Kees Kruith<strong>of</strong>, Jack van Schijndel<br />
Green chemistry becomes more popular and important. Therefore a green method is used to perform the<br />
Knoevenagel condensation reaction. The main goal is to synthesize 2,3,4-trihydroxybenzaldehyde to a styrene<br />
derivative, via the decarboxylation <strong>of</strong> its corresponding cinnamic acid derivative. 2,3,4-Trihydroxystyrene has<br />
three hydroxyl groups, and therefore it was anticipated it could function as good glue when polymerised to a<br />
polymer. The green Knoevenagel condensation reaction was carried out with 2,3,4-trihydroxybenzaldehyde,<br />
ammonium bicarbonate and malonic acid. The reaction was carried out without solvent. The expected product<br />
was a 2,3,4-trihydroxy cinnamic acid, but another reaction occurred between 2,3,4-trihydroxybenzaldehyde and<br />
malonic acid. The product was very polar and was purified by recrystallization in water. UV/VIS HPLC shows one<br />
signal, so there are no other uv-visible active components present. Different analyses such as LC-MS, 1H-NMR and<br />
13C-NMR proved that a coumarin-variant with carboxylic acid group has been synthesized. However, it is<br />
interesting that the coumarin is formed in a green way. Coumarin is used in the pharmaceutical industry and is<br />
<strong>of</strong>ten made through the Wittig or Perkin reaction. These reactions have a lower E factor, are less green and have<br />
lower yields. The reason that this reaction occurs is the ortho-hydroxy group. A condensation reaction takes place<br />
between the dicarboxylic acid and the ortho-hydroxy group. This reaction does not occur when using 3,4-<br />
dihydroxybenzaldehyde, a hydroxyl benzaldehyde without a hydroxyl group on the ortho-position, in the<br />
Knoevenagel reaction. This product reacts together with malonic acid to the corresponding cinnamic acid<br />
derivative, therefore this reactant would be a better alternative to synthesis a styrene-variant with two or more<br />
hydroxyl groups. To obtain the styrene-variant from the cinnamic acid-variant there only a decarboxylation<br />
reaction required.<br />
Keywords: 2,3,4-trihydroxybenzaldehyde • 3,4-dihydroxybenzaldehyde • Coumarin derivate • Green • Glue •<br />
Monomer • Knoevenagel condensation reaction • Decarboxylation • 1H-NMR • 13C-NMR • LC-MS<br />
[1] van Schijndel, J., et al., The Green Knoevenagel Condensation: Solvent-free condensation <strong>of</strong>benzaldehydes,<br />
manuscript.<br />
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Jim van Hassent<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Lectoraat Biobased Products, Jack van Schijndel en Kees Kruith<strong>of</strong><br />
Polystyrene is currently one <strong>of</strong> the most widely used plastics. Polystyrene is mainly used for packaging materials,<br />
insulating materials and household appliances. Polystyrene is not biodegradable and the monomer styrene is<br />
carcinogenic and toxic. Due to the rising costs <strong>of</strong> crude oil and concerns about environmental pollution, interest<br />
in potentially biobased plastics increases significantly. The purpose <strong>of</strong> this research is to synthesize the biobased<br />
monomer 4-vinylguaiacol with the green knoevenagel condensation to replace the monomer styrene. [1]<br />
Following this, 4-vinylguaiacol is acetylated to the monomer 4-acetoxy-3-methoxystyrene. After synthesizing the<br />
monomer 4-acetoxy-3-methoxystyrene, the monomer is polymerized by free radical polymerization. [2]<br />
The properties <strong>of</strong> the resulting polymer are determined using DSC, GPC and FTIR. Poly-4-vinylguaiacol is expected<br />
to be an amorphous polymer having a Tg <strong>of</strong> 86 ° C, it is also expected that the polymer has a higher hardness and<br />
modulus <strong>of</strong> elasticity than styrene. [3]<br />
Keywords: Polystyrene • biobased plastics • green knoevenagel condensation • 4-vinylguaiacol<br />
[1] van Schijndel, J., et al., The Green Knoevenagel Condensation: Solvent-free condensation <strong>of</strong> benzaldehydes<br />
[2] T. H. and H. H. Kunio Nakamura, “Nakamura K. Polymer Journal 1986.”<br />
[3] H. Leisch et al., “Chemicals from agricultural biomass: Chemoenzymatic approach for production <strong>of</strong><br />
vinylphenols and polyvinylphenols from phenolic acids),”<br />
25
Kayleigh van Bale<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Jack van Schijndel, Kees Kruith<strong>of</strong><br />
Self-healing materials are an interesting topic in the Green chemistry, an example <strong>of</strong> these self-healing materials<br />
can be created by using a Diels-Alder reaction. This reaction causes to bind two molecules together, which can be<br />
broken again with applying heat to the material [1]. This binding and breaking reaction causes a self-healing ability<br />
in the material itself [2]. The purpose <strong>of</strong> this project is synthesizing and analyzing this coupling and breaking<br />
mechanism, to test the durability <strong>of</strong> this reaction. This will be done using HPLC, TLC and FTIR. The reaction will be<br />
done with N-methylmaleimide and furfurylacetate to create a Diels-Alder product.<br />
Keywords: Diels-Alder • retro Diels-Alder • HPLC<br />
[1] V. Froidevaux, et al., study <strong>of</strong> the diels-alder and retro-diels-alder reaction between furan derivatives and<br />
maleimide for the creation <strong>of</strong> new materials, RSC Advances, 2015.<br />
[2] Jinhui Li, et al., Thermally reversible and self-healing novolac epoxy resins based on Diels–Alder chemistry,<br />
Journal <strong>of</strong> Applied Polymer Science, DOI: 10.1002/APP.42167<br />
26
Maartje Otten<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Kees Kruith<strong>of</strong>, Jack van Schijndel<br />
Nowadays green chemistry is becoming a more important topic during scientific research. Therefore, a<br />
green procedure is used to synthesise a styrene analog from syringaldehyde. The main goal is to perform<br />
a polymerization with a biobased styrene analog made out <strong>of</strong> syringaldehyde and to investigate the<br />
physical and mechanical properties. Polystyrene, one <strong>of</strong> the most used polymers worldwide, is made<br />
from the toxic monomer styrene and should therefore be replaced for nontoxic and biobased polymers.<br />
For the production <strong>of</strong> the styrene analog the green Knoevenagel condensation reaction is performed<br />
with ammonium bicarbonate and malonic acid combined with a decarboxylation performed by using<br />
heat and a small amount <strong>of</strong> ammonium bicarbonate. The reaction is performed with a minimal amount<br />
<strong>of</strong> ethyl acetate as solvent. The expected product <strong>of</strong> these combined reactions is canolol and is analysed<br />
with FTIR and HPLC with a uv-vis detector. HPLC showed that the product also consisted <strong>of</strong> canolol diand<br />
trimers. Because <strong>of</strong> the present hydroxyl group in canolol the product has been acetylated to<br />
perform a radical polymerization. The acetylation reaction is performed using acetic anhydride and<br />
triethylamine. The amount <strong>of</strong> acetic anhydride and triethylamine used for the reaction was found out<br />
to be very crucial and should be very precise. After that a solution polymerization and suspension<br />
polymerization has been performed. The products <strong>of</strong> the polymerizations are subsequently analysed<br />
with size exclusion chromatography and differential scanning calorimetry.<br />
Keywords: syringaldehyde • green Knoevenagel condensation • decarboxylation • acetylation • styrene analog •<br />
green chemistry • HPLC uv-vis • solution polymerization • suspension polymerization<br />
[1] van Schijndel, J., et al., The Green Knoevenagel Condensation: Solvent-free condensation <strong>of</strong> benzaldehydes,<br />
unpublished results.<br />
[2] Nakamura, K., et al., DSC Studies on Hydrogen Bonding <strong>of</strong> Poly(4-hydroxy-3,5-dimethoxystyrene) and<br />
Related Derivatives, Polymer Journal, vol. 18, p. 219-225, 1986.<br />
[3] Vicari, R., et al., Process for the suspension polymerisation <strong>of</strong> 4-acetoxystyrene and hydrolysis to 4-<br />
hydroxystyrene polymers, US 4962147, 1990.<br />
27
Pricilla Moerland<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Avans Biopolymerengroep, Royal Cosun, TU Eindhoven, Rijksuniversiteit Groningen<br />
In collaboration with Avans Biopolymer Group, Royal Cosun, TU Eindhoven and Rijksuniversiteit Groningen, an<br />
research has been launched about biobased styrene analogues, including HMVF (5-hydroxymethyl-2-vinylfuran)<br />
synthesized from HMF. Poly-HMVF can be used as a versatile glue. It can bind to a variety <strong>of</strong> substrates, such as<br />
metal, glass, plastic and rubber, under heating or acid treatment at room temperature [1,2]. HMF is converted to<br />
its dicarboxylic acid through a green Knoevenagel condensation, after which decarboxylation follows to HMVF.<br />
This research focuses mainly on the decarboxylation, the purpose <strong>of</strong> this research is to develop and compare<br />
decarboxylation methods, where the dicarboxylic acid is decarboxylated to HMVF. The starting product, HMF, has<br />
been synthesized from D-fructose with Amberlyst-15 as a catalyst. Next, HMF is converted to its dicarboxylic acid<br />
with malonic acid and ammonium bicarbonate, this concerns the green Knoevenagel condensation [3]. The<br />
carboxyl groups must be removed by decarboxylation, 4 different methods are carried out and compared. This<br />
concerns a decarboxylation with Cu2O (combined with HMTA), CuI (combined with 1,10-phenantrioline), KOAc or<br />
AgOAc [4,5]. Cu2O provides a decarboxylation to its monocarboxylic acid, decarboxylation to HMVF should be<br />
further investigated. KOAc and CuI decarboxylation results in an unknown product, with the same retention time<br />
on HPLC-DAD analysis (to be continued). This peak is not found when a decarboxylation with AgOAc is carried out,<br />
also a lot <strong>of</strong> by-products are formed using this method.<br />
Keywords: HMF • Green Knoevenagel condensation • decarboxylation • HMVF<br />
[1] Miaomiao Han, et al., 5-Hydroxymethyl-2-vinylfuran: A biomass-based solvent-free adhesive, Green<br />
Chemistry: The Royal Society <strong>of</strong> Chemistry, 2013.<br />
[2] Naoki Yoshida et al., Brand-new Biomass-based Vinyl Polymers from 5-Hydroxymethylfurfural (HMF),<br />
Polymer Journal, V40, No. 12, 2008, P 1164–1169.<br />
[3] Jack van Schijndel et al., The Green Knoevenagel Condensation: Solvent-free Condensation <strong>of</strong> Benzaldehydes,<br />
2016.<br />
[4] Lukas J. Gooßen et al., Comparative Study <strong>of</strong> Copper- and Silver-Catalyzed Protodecarboxylations <strong>of</strong><br />
Carboxylic Acids, ChemCatChem V2, 2010, P 430 – 442.<br />
[5] [5] Kunitsky et al., Method for preparing hydroxystyrenes and acetylated derivatives there<strong>of</strong>, US 0228191 A1,<br />
Oct. 13, 2005.<br />
28
Rik Mermans<br />
ATGM Academy <strong>of</strong> technology, health and environment (academie voor Technologie Gezondheid en Milieu)<br />
Avans university <strong>of</strong> applied sciences, Breda<br />
Kees Kruith<strong>of</strong> and Jack van Schijndel<br />
Sinapinic acid be synthesised from aldehydes via the green knoevenagel Doebner reaction. The aldehydes can be<br />
derived from lignine in wood, the following sinapinic acid can decarboxylate too canolol a biobased styrene variant<br />
[1]. The decarboxylation <strong>of</strong> the sinapinic acid is not very efficient and will produce a lot <strong>of</strong> di- and trimers <strong>of</strong> canolol.<br />
Decarboxylation have been described with several similar compounds, which used copper(I) and silver(I)<br />
complexes for decarboxylation [2-4]. The decarboxylation was carried out with a copper(I)iodide 1,10<br />
phenanthroline complex in PEG-400 as benign solvent in a microwave, and yielded surprising results. According to<br />
HPLC analysis the canolol obtain after a simple liquid/liquid extraction was up to 90 to 95% purity with only a small<br />
residue <strong>of</strong> sinapinic acid and di- and trimers.<br />
Keywords: Microwave Decarboxylation • sinapinic acid • canolol • biobased styrene variants<br />
[1] Jack van Schijndel et al “the green knoevenagel condensation: solvent-free <strong>of</strong> benzaldehydes” manuscript<br />
[2] Lucak J. Gooßen et al “Comparative Study <strong>of</strong> Copper- and Silver-CatalyzedProtodecarboxylations <strong>of</strong><br />
Carboxylic Acids” ChemCatChem, 2012, vol 2, p 430-442<br />
[3] Yong Zou et al “CuI/1,10-phen/PEG promoted decarboxylation <strong>of</strong> 2,3-diarylacrylic acids: synthesis <strong>of</strong><br />
stilbenes under neutral and microwave conditions with an in situ generated” recyclable catalyst” 2013,<br />
Organic en Biomolecular Chemistry, vol 11, p 6967- 6974.<br />
[4] Stéphane Cadot et al “Preparation <strong>of</strong> functional styrenes from biosourced carboxylic acids by copper<br />
catalyzed decarboxylation in PEG” 2014, Green chemistry, vol. 16, p 3089- 309<br />
29
30
Amber Jaspars<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Jack van Schijndel<br />
PET is a thermoplastic polymer which is produced in large numbers for example soda bottles, food packaging and<br />
textile industry. By the mechanical recycling <strong>of</strong> PET the chain length will become shorter and the properties <strong>of</strong> the<br />
polymer will decrease. By the chemical recycling <strong>of</strong> PET, PET will be depolymerized and the chemical identity will<br />
be saved. In this way new molecules and polymers can be build. In this project PBOx6 will be synthesized from old<br />
PET-bottles. The first step is to make the intermediate BHPTA by an aminolysis. With a cyclization the BHPTA can<br />
be synthesize to PBOx6 [1].<br />
PBOx6 is a coupling agent, across linking agent or a chain extender[1]. For example it will link 2 broken PET polymer<br />
together, so the chemical identity will be the same as the last bottle.<br />
Keywords: PET-bottles waste • PBOx6 • BHPTA • recycling<br />
[1] Rikhil V. Shah, Vasant S. Borude and Sanjeev R. Shukla “Recycling <strong>of</strong> PET Waste Using 3-Amino-1-propanol by<br />
Conventional or Microwave Irradiation and Synthesis <strong>of</strong> Bis-oxazin therefrom”, journal <strong>of</strong> applied polymer<br />
science, 2013, DOI 10.1002/app.37900<br />
31
Jur Brunsting<br />
ATGM Academie voor Technologie Gezondheid en Milieu, Avans Hogeschool, Breda<br />
Biobased, Avans Hogeschool<br />
In modern day society, recycling <strong>of</strong> waste products becomes more important every day. One <strong>of</strong> the most abundant<br />
waste materials is PET, mostly from food and beverage packages. PET can be recycled to form new PET, but this<br />
will cause the chains to become shorter. To counter this effect, linking molecules can be added. These molecules<br />
can also be used for linkage <strong>of</strong> phenoles, diols and dicarboxylic acids.<br />
The project focuses on the synthesis <strong>of</strong> PBOx7, seen below as the bottom structure, from BHBuTA, seen below as<br />
the middle structure, through a ring closure. BHBuTA is synthesized from PET s<strong>of</strong>t drink bottles by aminolysis.<br />
Keywords: PBOx7 • PBOx6 • PBOx5 • aminolysis • ring closure • linking chemistry<br />
[1] Al-Sabagh, “Greener routes for recycling <strong>of</strong> polyehtylene terephthalate”<br />
[2] S. Shukla, “Aminolysis <strong>of</strong> polyethylene terphthalate waste”<br />
[3] R. Shah, “Recycling <strong>of</strong> PET waste using 3-amino-1-propanol by conventional or microwave irradiation and<br />
synthesis <strong>of</strong> bis-oxazin there from”<br />
32
W.J.M van Oorschot<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Jack van Schijndel<br />
Oxazolines are 5-membered heterocyclic rings containing one oxygen and one nitrogen atom, and are well known<br />
in polymer chemistry [1]. Here they function as monomer [2] in cationic ring-opening polymerisation (CROP), chain<br />
extender [1, 3] or cross-linker molecules coupling to the aliphatic carboxylic acid chain ends to increase mass<br />
and/or to give specific properties to the material Besides, 2-oxazolines can be obtained from polyethylene<br />
terphtalate (PET) recycling process. In this work the reactivity <strong>of</strong> a model 2-oxazoline (phenyloxazoline) (PhOx)<br />
towards aromatic carboxylic acids (ACAs) is determined in terms <strong>of</strong> conversion, to get a better understanding <strong>of</strong><br />
the reaction. The conversion is measured with Reversed Phase High Performance Liquid Chromatography (RP-<br />
HPLC) and characterized with LC-MS. Coupling reactions are performed at microscale level using benzoic acid (BA),<br />
terephtalic acid (TPA) and trimeric acid (TA) as ACAs at various temperatures (100-, 150- and 200°C). All three<br />
ACAs showed coupling with PhOx within two hours with negible side reactions. The following reactivity was found:<br />
BA > TA > TPA. BA already reached conversion <strong>of</strong> ~99% after 10 min at 200°C, however TPA and TA reached only<br />
50-60% after 10 min. Both the mono and bis coupling products for TPA, and the mono, bis and tris-products for<br />
TA were mainly formed at 100°C, while reactions at 200°C almost immediatly formed the bis or tris-product for<br />
TPA and TA, in respect. Furthermore, the influence <strong>of</strong> the lewis acid ZnCl on the conversion was determined at<br />
100°C for both BA and TPA, resulting in a significantly higher conversion. This study indicates that beside standard<br />
aliphatic carboxylic acids, the tested ACAs; benzoic acid, terephtalic acid and trimeric acid can undergo a coupling<br />
reaction with PhOx.<br />
Keywords: 2-oxazoline • carboxylic acid • coupling reaction • PET recycling • microscale synthesis<br />
[1] L. Néry, H. Lefebvre en A. Fradet, „Kinetic and Mechanistic Studies <strong>of</strong> Carboxylic Acid-Bisoxazoline Chain-<br />
Coupling Reactions,” Macromol. Chem. 2003, 204, 1755-1764<br />
[2] A. Makino en S. Kobayashi, „Chemistry <strong>of</strong> 2-Oxazolines: A Crossing <strong>of</strong> Cationic Ring-Opening Polymerization<br />
and Enzymatic Ring-Opening Polyaddition,” Journal <strong>of</strong> Polymer Science, 2010, vol. 48, 1251-1270<br />
[3] T. Loontjes, K. Pauwels, F. Derks, M. Neilen, C. Sham en M. Serné, „The Action <strong>of</strong> Chain Extenders in Nylon-<br />
6, PET, and Model Compounds,” Polymer Science, 1997, vol. 65, 7, 1813-1819<br />
33
Mike Dirks<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Oxazolines are 5-membered ring structures containing one nitrogen and one oxygen atom.<br />
2-substituted oxazolines can be obtained as a product in a recycling process <strong>of</strong> polyethylene terephthalate (PET)<br />
[1]. These oxazolines can be used as ligand catalysts, protecting groups, as a monomer in cationic ring opening<br />
polymerization or as a reagent in reactions with a wide variety <strong>of</strong> compounds [2]. In this study, the reactivity <strong>of</strong> 2-<br />
phenyl-2-oxazoline (PhOx) towards phenolic compounds was determined. This was done by carrying out reactions<br />
between PhOx and various phenolic compounds on a micro synthesis scale, at varying reaction conditions. The<br />
influence <strong>of</strong> the reaction temperature and presence <strong>of</strong> a catalyst was determined by measuring the conversion <strong>of</strong><br />
PhOx using high performance liquid chromatography (HPLC).<br />
Keywords: Oxazolines • Phenols • Coupling reaction • PET recycling • Micro synthesis<br />
[1] Rikhil V. Shah, Vasant S. Borude, Sanjeev R. Shukla, „Recycling <strong>of</strong> PET Waste Using 3-Amino-1-propanol by<br />
Conventional or Microwave Irradiation and Synthesis <strong>of</strong> Bis-oxazin There From,” Journal <strong>of</strong> applied polymer<br />
science, pp. 1-6, 2012.<br />
[2] J. A. Frump, „Oxazolines, their preparation, reactions, and applications,” Chemical reviews, pp. 483-505,<br />
1971.<br />
34
Thom van der Ende<br />
ATGM Academy Technology, Health and Environment<br />
Avans Hogeschool, Breda<br />
MKB, Avans group Biopolymers<br />
In our daily life we encounter a lot <strong>of</strong> plastics which <strong>of</strong>ten contain pigment components which are unfriendly for<br />
the environment. Therefore it is necessary to develop a biobased method for the production <strong>of</strong> so called<br />
colormasterbatches (CMB). Expected is that a CMB can be made by a simple aldol-condensation [1] between 4-<br />
Hydroxybenzaldehyde (4-HB) (1) and acetone or acetylacetone to form a curcumin like molecule (2, 3). Due to the<br />
aromatic property this component should have a red color. It is found that curcumin blocks the growth factor <strong>of</strong> a<br />
cancer cell [2]. But due to the bio-obtainability <strong>of</strong> curcumin it is important to develop curcumin like derivatives<br />
which may have the same effect on cancer cells but have a better uptake in the human body.<br />
In this study various aldolcondensaties between 4-HB and acetone has been carried out using NaOH as a base<br />
catalyst. Two methods for the reactions were compared, one was using a condenser and one was not using a<br />
condenser, assuming using no condenser gives better yield. The reactions where followed by TLC and HPLC<br />
analyses. In all cases a red substance was formed. The reactions using a condenser formed two products,<br />
presumably mono-4-HBA (2) and Di-4-HBA (3). The reaction without condenser formed only one product which is<br />
does not match the retention time <strong>of</strong> the products <strong>of</strong> the reaction with condenser. Separation <strong>of</strong> the was<br />
successfully carried out with column chromatography. But according to HPLC analyses the components before and<br />
after purification didn’t match. Idendentification by LC-MS analyses hasn’t been obtained yet.<br />
This study will continue in investigating the reaction between 4-HB and acetylacetone using boride complexes.<br />
Keywords: 4-Hydroxybenzaldehyde • HMF • color master batch • anticancer • aldolcondensation reaction<br />
[1] L. Wade, „Organic Chemistry 8th,” Pearson, pp. 1098-1117.<br />
[2] M. Heger, „Een wonderlijke wortel en een fanatieke onderzoeker versus twee dodelijke ziekten,”<br />
17 July 2016. [Online]. Available: https://nieuws.nl/populair/20160717/wonderlijke-wortel-en-fanatieke-onderzoeker-versusalvleesklierkanker/.<br />
35
Justin Kroos<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
In this day and age, a world without dyes and colorants is imposible to imagine. These compounds have unlimited<br />
applications in utilitarian objects and food. The current market <strong>of</strong> dyes is dominated by compounds which can<br />
have a negative impact on the environment. The widely applicable building block HMF (5-hydroxymethylfurfural)<br />
can be synthesized by dehydration <strong>of</strong> monosacharides and can therefore be considered a biobased building block.<br />
In this research, we aimed to synthesize several HMF-based dyes by coupling HMF with acetone and acetylacetone<br />
(yielding bis-HMFA and tris-HMFAA, respectively) in presence <strong>of</strong> a basic catalyst. This was carried out under<br />
conventional dehydration conditions and by evaporation driven condensation, after which the results were<br />
compared. In this respect, the emphasis was placed on the formation <strong>of</strong> the mono product <strong>of</strong> HMF and<br />
acetylacetone (HMFAA). This compound could be the basis <strong>of</strong> other dyes by coupling it with other aromatic<br />
compounds instead <strong>of</strong> HMF. The coupling <strong>of</strong> HMF with acetone and acetylacetone yielded a solid or oil <strong>of</strong> which<br />
its solution was colored brightly yellow and darker yellow, respectively.<br />
Keywords: Fructose • hydroxymethylfurfural • dye • colorant • biobased<br />
[1] Gürses, A., & al., e. (2016). Dyes and Pigments. Springer.<br />
[2] Mehta, A. (2012). Ultraviolet-Visible (UV-Vis) Spectroscopy – Woodward-Fieser Rules to Calculate<br />
Wavelength <strong>of</strong> Maximum Absorption (Lambda-max) <strong>of</strong> Conjugated Carbonyl Compounds. Opgeroepen op<br />
Maart 8, <strong>2017</strong>, van Pharmaxchange.info: http://pharmaxchange.info/press/2012/08/ultraviolet-visible-uvvis-spectroscopy-%E2%80%93-woodward-fieser-rules-to-calculate-wavelength-<strong>of</strong>-maximum-absorptionlambda-max-<strong>of</strong>-conjugated-carbonyl-compounds/<br />
[3] University <strong>of</strong> Liverpool. (sd). UV-conjugation <strong>of</strong> Aniline Yellow and Janus Green . Opgeroepen op Maart 10,<br />
<strong>2017</strong>, van Chemtube : http://www.chemtube3d.com/DyeAnilineyellow.htm<br />
[4] Wade, L. G. (2014). Organic Chemistry. Pearson.<br />
36
Martijn Knoope<br />
Avans University <strong>of</strong> Applied Sciences<br />
Breda<br />
Jack van Schijndel<br />
Curcumin and its derivatives are strongly coloring substances that can be used in a green color masterbatch.<br />
Syringaldehyde is seen as a promising derivative on vanillin, that has the same coloring properties. In a reaction<br />
with acetone or acetylacetone an intense yellow to red color is expected. A continuous supply <strong>of</strong> syringaldehyde<br />
is available from lignin, which is a waste product in the pulp industry and a big side-product is in the conversion <strong>of</strong><br />
biomass to bio-ethanol. Syringaldehyde is also available from the cell walls <strong>of</strong> plants, this makes it the second most<br />
common biopolymer beyond cellulose and thus a green starting product. In this project two different catalysts for<br />
the synthesis <strong>of</strong> mono-syringaldehyde-acetone and mono-syringaldehyde-acetylacetone are examined. In<br />
addition both catalyst are also compared with a more reactive derivative <strong>of</strong> syringaldehyde, hydroxymethylfurfural<br />
(HMF).<br />
Keywords: Syringaldehyde • color masterbatch • aldolcondensation • knoevenagel condensation • green<br />
chemistry<br />
[1] Ibrahim, M. N. Mohamed en R. Sripransanthi, „A concise review <strong>of</strong> the natural existance, synthesis,<br />
proerties, and applications <strong>of</strong> syringaldehyde,” BioResources, pp. 4377-4399, 2012.<br />
[2] L. Wade, Organic Chemistry, Amerika: Pearson Education, 2015.<br />
[3] F. Rouessac en A. Rouessac, Chemical analysis, West Sussex: John Wiley & Sons, 2007.<br />
37
38
Annabelle Dijk<br />
ATGM Academie van technologie gezondheid en milieu<br />
Avans Hogeschool, Breda<br />
Research group analysis techniques in the Life Sciences (ALS)<br />
Edward Knaven<br />
Taxanes, including paclitaxel and docetaxel, are known for their anti-cancer activity. Paclitaxel naturally occurs in<br />
different taxus species. There is one disadvantage and that is that to obtain paclitaxel the taxus plant has to be<br />
destroyed. As a result, the long term availability is scarce. There are a variety <strong>of</strong> other taxanes present in the taxus,<br />
for example 10-deacetylbaccatin III (10-DAB). 10-DAB can be isolated from the leaves <strong>of</strong> the taxus, therefore the<br />
plant does not have to be destroyed. 10-DAB can be used for the semi-synthesis <strong>of</strong> docetaxel and paclitaxel. The<br />
aim <strong>of</strong> this project is to synthesize N-tert-Butoxycarbonyl-3-phenylisoserine side chain, and coupling it to 10-DAB.<br />
The first step in synthesizing the side chain is de esterification <strong>of</strong> phenylglycine and reducing it with LiALH4 to an<br />
primary amine alcohol. The next step is the attachment <strong>of</strong> the tert-butoxy group through an carbonylation <strong>of</strong> the<br />
amine with di-tert-butyl-dicarbonate. After that the formation <strong>of</strong> an aldehyde through an Swern oxidation<br />
reaction. The aldehyde undergoes an alkylation reaction with vinylmagnesium bromide and after oxidation with<br />
ruthenium oxide it results in the N-tert-Butoxycarbonyl-3-phenylisoserine side chain. The next step in the synthesis<br />
<strong>of</strong> docetaxel is the protection <strong>of</strong> the hydroxyl groups, present on 10-DAB, with trimethylsilyl chloride. Once they<br />
are protected, the N-tert-Butoxycarbonyl-3-phenylisoserine side chain can be linked with the 10-DAB with 4-<br />
Dimethylaminopyridine (DMAP), and after deprotection <strong>of</strong> de hydroxyl groups , docetaxel is formed.<br />
[1] Jean-Noel Denis, et al., Direct, Highly Efficient Synthesis from (S)-+( ) -Phenylglycine <strong>of</strong> the Taxol and<br />
Taxotere Side Chains, J. Org. Chem. 1991,56,6939-6942.<br />
[2] Sunay V. Chankeshwara, et al., Catalyst-Free Chemoselective N-tert-Butyloxycarbonylation <strong>of</strong> Amines in<br />
Water, organic letters, 2006 Vol. 8, No. 15, 3259-3262.<br />
[3] Van der Does, Thomas, SALT OF PHENYLGLYCINE METHYL ESTER, DSM Sinochem Pharmaceuticals<br />
Netherlands B.V., Neth.<br />
39
Bas van de Velde<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
research group analysis techniques in the Life Sciences (ALS)<br />
Edward Knaven<br />
Paclitaxel, a diterpenoid (toxoid) with four rings, are a type <strong>of</strong> chemotherapy medication used to treat varies types<br />
<strong>of</strong> cancer, including ovarian, breast and lung cancer [1]. Initially almost all paclitaxel was derived from the bark <strong>of</strong><br />
different Taxus species, the harvesting <strong>of</strong> which has a destructive effect on the tree [2]. The content <strong>of</strong> paclitaxel<br />
in Taxus is low (about 6 – 600 µg/g) [3], and the demand for paclitaxel as cytostatic drug exceeds the supply, which<br />
has pushed different Taxus species on the brink <strong>of</strong> extinction. However, some metabolites related to paclitaxel,<br />
for example 10-DAB, are more abundantly available in Taxus species. In this work, a core-shell molecular imprinted<br />
polymer (MIP) using emulsion polymerisation was prepared in order to separate 10-DAB from crude Taxus baccata<br />
L. extract. The core-shell was prepared using methyl methacrylate (MMA) and ethylene glycol dimethylacrylate<br />
(EGDMA) as monomers. In the imprinting polymer, 10-DAB was used as template molecule; methacrylic acid<br />
(MAA) and EGDMA were used as functional monomers; and CaCO3 was used as porogenic agent to increase<br />
porosity. The synthesizes MIP was characterised using Scanning electron microscopy (SEM), Dynamic light<br />
scattering (DLS), Thermogravimetric analysis (TGA), and Fourier transform infrared spectroscopy (FTIR).<br />
Keywords: Core-shell • Molecular imprinted polymer • toxoids • 10-DAB • emulsion polymerisation<br />
[1] Wianowska, D.; Hajnos, M. Ł; Dawidowicz, A. L.; Oniszczuk, A.; Waksmundzka-Hajnos, M.; Głowniak, K.<br />
Extraction Methods <strong>of</strong> 10-Deacetylbaccatin III, Paclitaxel, and Cephalomannine from Taxus baccata L. Twigs:<br />
A Comparison. Journal <strong>of</strong> Liquid Chromatography & Related Technologies 2009, 32, 589.<br />
[2] Cao, X.; Tian, Y.; Zhang, T. Y.; Ito, Y. Separation and purification <strong>of</strong> 10-deacetylbaccatin III by high-speed<br />
counter-current chromatography. Journal <strong>of</strong> Chromatography A 1998, 813, 397-401.<br />
[3] Fu, Y.; Zu, Y.; Li, S.; Sun, R.; Efferth, T.; Liu, W.; Jiang, S.; Luo, H.; Wang, Y. Separation <strong>of</strong> 7-xylosyl-10-deacetyl<br />
paclitaxel and 10-deacetylbaccatin III from the remainder extracts free <strong>of</strong> paclitaxel using macroporous resins.<br />
Journal <strong>of</strong> Chromatography A 2008, 1177, 77-86.<br />
40
Egor Silin<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
University <strong>of</strong> Utrecht<br />
To prevent the adhesion <strong>of</strong> the bacteria Pseudomonas aeruginosa to human bodycells, researchers <strong>of</strong> the<br />
University <strong>of</strong> Utrecht have developed an inhibitor consisting sugar molecules as building blocks [1]. Those in<br />
inhibitors are at first divalent, but after using a coupling bridge to combine two <strong>of</strong> the same molecules, the inhibitor<br />
becomes tetravalent. The main goal <strong>of</strong> this study is to synthesis this coupling bridge using 4-dimethoxybenzene<br />
and tetra ethylene glycol as starting products. The expected yield for this product will be around 70% using 4<br />
different synthesis steps. First <strong>of</strong> all, the 4-dimethoxybenzene was transformed in to 1,4-Dimethoxy-2,5-<br />
diiodobenzene using Iodide and potassium iodate in an acidic solution. After that, the 1,4-Dimethoxy-2,5-<br />
diiodobenzene was transformed in to 2,5-diiodo-4-methoxyphenol using Lithium Aluminium Hydride under<br />
nitrogen. Tetraethyleneglycol was used to transform it in to ditosyltetraethylene glycol using toluenesulfonyl<br />
chloride and a strong base. After the syntheses <strong>of</strong> those products, both <strong>of</strong> them were combined to create the final<br />
product using sodium hydride.<br />
Keywords: Bacterial Inhibition • Pseudomonas aeruginosa • Nucleophilic Substitution and Elimination<br />
[1] Pertici F., de Mol N.J., Kemmink J., Pieters R.J., Optimizing Divalent Inhibitors Pseudomonas aeruginosa<br />
Lectin LecA by Using A Rigid Spacer, Chemistry, A European Journal, 16923-16297<br />
41
Joyce van der Made<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans hogeschool, Breda<br />
University <strong>of</strong> Utrecht<br />
Cancer is one <strong>of</strong> the biggest problem in the world. A lot <strong>of</strong> people dying, because <strong>of</strong> this disease. With the<br />
technology <strong>of</strong> this century, there are cures for the different kind <strong>of</strong> cancer. One <strong>of</strong> this cures is a body-like<br />
substance, such as galectins. This are proteins which can be helpful to trace and defeat the cancer. The purpose<br />
<strong>of</strong> this project is to make the first steps towards the synthesis <strong>of</strong> 3-azido derivate <strong>of</strong> galactose, which is needed for<br />
the C(3) substituted thiodigalactosides. [1] [2] So the synthesis <strong>of</strong> 3-O-acetyl-1,2,5,6-di-O-isopropylidene-α-Dgul<strong>of</strong>uranose<br />
from 1,2,5,6-diacetone-α-D-gluc<strong>of</strong>uranoside must performed. Also the products can be analysed<br />
with 1H- and 13C-NMR (Nuclear Magnetic Resonance) and determined the yield. The expectation <strong>of</strong> this project<br />
was that the yield <strong>of</strong> 3-O-acetyl-1,2,5,6-di-O-isopropylidene-α-D-gul<strong>of</strong>uranose 66% is with a purity <strong>of</strong> 76%. With<br />
NMR the different peaks are found which are characterizing for this product. There should be performed three<br />
syntheses. The first synthesis with pyridinium dichromate (PDC) and acetic anhydride were performed to change<br />
the hydroxy-group to a ketone. The second reaction with pyridine and acetic anhydride were performed to change<br />
the ketone to a acetoxy-group. The last reaction was with H2 and palladium on carbon to flip over the acetyl- and<br />
the diacetone-group. The syntheses was followed with TLC and analyzed with NMR, HPLC and LC-MS.<br />
Keywords: Cancer • galectins • thiodigalactosides • NMR • TLC<br />
Figure 1: The whole synthesis <strong>of</strong> 3-O-acetyl-1,2,5,6-di-O-isopropylidene-α-D-gul<strong>of</strong>uranose from 1,2,5,6-diacetoneα-D-gluc<strong>of</strong>uranoside<br />
[1] Zhou, S. ‘’Galectins in channel catfish, Ictalurus punctatus: Characterization and expression pr<strong>of</strong>iling in<br />
mucosal tissues’’ Fish and Shellfish Immunology, 2016, 49, 324-335.<br />
[2] Cummings, R. D, ‘’Galectins. In A. Varki’’ Essentials <strong>of</strong> Glycobiology, New York: Cold Spring Harbor, 2009.<br />
42
Mikey Immers<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Edward Knaven, lectorate ALS<br />
Taxoids and in particular Paclitaxel are known as mitotic inhibitors which are able to inhibit the growth <strong>of</strong> tumors<br />
by inhibiting microtubule polymerization and thus preventing cells from entering mitosis, taxoids are potential<br />
chemotherapeutic agents against cancer. However currently the problem research is facing is the separation <strong>of</strong><br />
the components <strong>of</strong> a mixture <strong>of</strong> taxoids [1]. Hence why a method <strong>of</strong> molecularly imprinted polymers (MIPs) with<br />
core shell <strong>of</strong> nanoparticles is being developed in order to isolate 10-Deacetylbaccatin III as precursor from<br />
Paclitaxel. With the use <strong>of</strong> molecular imprinting it is possible to synthetize cross-linked polymers that are capable<br />
<strong>of</strong> selective molecular recognition, which is the interaction between molecules through noncovalent bonding [2].<br />
The characterization <strong>of</strong> the MIPs after template removal will be determined with the use <strong>of</strong> RP-HPLC. Whereas the<br />
morphology and structure <strong>of</strong> the MIPs will be researched by a scanning electron microscope (SEM) to image<br />
polymer macro-pores. And dynamic light scattering (DLS) will be applied to determine the particle size distribution<br />
and polydispersity index.<br />
Keywords: Taxoids • Molecular Imprinted Polymers • Mitotic inhibitors • 10-Deacetylbaccatin III • Paclitaxel Core<br />
shell<br />
[1] B. Joshi, "An NMR and LC–MS based approach for Mixture Analysis involving Taxoid molecules from Taxus<br />
wallichiana," Journal <strong>of</strong> Molecular Structure, pp. 235-248, 25 October 2002.<br />
[2] M. Gagliardi, "Molecularly Imprinted Biodegradable Nanoparticles," Scientific reports, pp. 1-9, 10 January<br />
<strong>2017</strong>.<br />
43
Nienke Hoetelmans<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Lectoraat Analysetechnieken in Lifescience (ALS)<br />
Edward Knaven<br />
A major problem in today's society is the disease cancer. Paclitaxel is an antimitotic cytostatics inhibitor and can<br />
withstand certain types <strong>of</strong> cancer. Paclitaxel is naturally present in Taxus baccata . This is at such low<br />
concentrations that synthesis routes are sought to make this substance in large quantities. Therefore, a synthesis<br />
has been performed to get paclitaxel in hand. First, the side group <strong>of</strong> N-benzoyl-β-phenylisoserine was<br />
synthesized, then coupled to 10-deacetylbaccatin III, which is naturally also present in the Taxus baccata, and is<br />
highly similar to paclitaxel.[1] The purpose <strong>of</strong> this study is to synthesize paclitaxel using a starting substance<br />
resembling paclitaxel, and obtained from the Taxus. [2] In this study 10-deacetylbaccatin III is used. This will be<br />
coupled to N-benzoyl-β-phenylisoserine, and must be synthesized first properly under the appropriate conditions.<br />
It is expected that if the reaction is carried out under the appropriate conditions, N-benzoyl-β-phenylisoserine and<br />
paclitaxel can be synthesized with a low yield. And at least, to identify paclitaxel, it will be analysed with FTIR, HPLC<br />
and LC-MS.<br />
Keywords: Paclitaxel • N-benzoyl-β-phenylisoserine • 10-DAB • cancer • Taxus baccata<br />
Synthesis <strong>of</strong> N-benzoyl- β-phenylisoserine<br />
[1] E. Baloglu, „A New Synthesis <strong>of</strong> Taxol ® from Baccatin III.,” 1998.<br />
[2] A. C. a. A. E. G. Jean-Noel Denis, „Direct, Highly Efficient Synthesis from Phenylglycine <strong>of</strong> the Taxol and<br />
Taxotere side chains,” Grenoble Cedex, 1991.<br />
44
Thomas Mintjes<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
Edward Knaven<br />
Cephalomannine is a natural product with a structure similar to the anti-cancer drug Paclitaxel.<br />
Paclitaxel is normally extracted from the bark <strong>of</strong> the tree Taxus Brevifolia. In this process the tree is killed<br />
and only a small amount <strong>of</strong> Paclitaxel can be extracted from the bark <strong>of</strong> this tree. A different species <strong>of</strong><br />
Taxus, Taxus Baccata, also contains Paclitaxel, however in addition to the desired compound, different<br />
compounds are also extracted. One <strong>of</strong> these compounds is Cephalomannine. Cephalomannine also has<br />
cyto-toxic activity, but it’s lower than that <strong>of</strong> Paclitaxel. The aim <strong>of</strong> this project is to investigate a way to<br />
convert the unwanted Cephalomannine into Paclitaxel as well as synthesize analogues <strong>of</strong> Paclitaxel that<br />
have been proven to also have a high cytotoxic activity.<br />
[1] J. H. Johnson, R. T. Gallegher, D. Wang, and J. S. Juchum, "Methods and compositions for converting taxane<br />
amides to paclitaxel or other taxanes," ed: Google Patents, 2004.<br />
[2] Ojima, C. L. Fumero-Oderda, S. D. Kuduk, Z. Ma, F. Kirikae, and T. Kirikae, "Structure–activity relationship<br />
study <strong>of</strong> taxoids for their ability to activate murine macrophages as well as inhibit the growth <strong>of</strong><br />
macrophage-like cells," Bioorganic & Medicinal Chemistry, vol. 11, pp. 2867-2888, 7/3/ 2003.<br />
45
46
Willem Aarts<br />
ATGM academie voor Technologie Gezondheid en Milieu<br />
Avans University <strong>of</strong> Applied Sciences, Breda<br />
Dr. Sylvestre Bonnet and doctoral student Anja Busemann, University <strong>of</strong> Leiden<br />
With a view to creating ruthenium complexes with a potential application in the field <strong>of</strong> photodynamic therapy <strong>of</strong><br />
cancer, certain appropriately functionalized terpyridine ligand were synthesized. We describe the synthesis <strong>of</strong><br />
[2,2':6',2''-terpyridin]-4'-ylmethanol (3). The ligand was attempted to be synthesized in two different syntheses<br />
routes. In both cases, [2,2':6',2''-terpyridine]-4'-carboxylic acid (1) was used, which was obtained using a one-pot<br />
synthesis.[1] The first route, carboxylic acid (1) was reduced using lithium aluminium hydride in attempt to obtain<br />
the ligand 3.[2,3] Where in the second route, a Fischer esterification was performed on the carboxylic acid,[4]<br />
giving methyl [2,2':6',2''-terpyridine]-4'-carboxylate (2), followed by a reduction using sodium borohydride to<br />
obtain ligand 3.[5] The yield for the ligand 1 was 8%. For the reductions via both routes, no molecules have been<br />
characterized yet, due to the impurities. The synthesis <strong>of</strong> ligand 1 has been confirmed by 1H NMR, mass<br />
spectrometry and IR.<br />
Keywords: ruthenium • terpyridine ligands • multidentate ligands • photodynamic therapy<br />
[1] Stublla, A.; Potvin, P. G. Eur. J. Inorg. Chem. 2010, No. 19, 3040–3050.<br />
[2] Le, D. D.; Zhang, Y.; Chien, D. H.; Moravek, J. Journal <strong>of</strong> Labelled Compounds and Radiopharmaceuticals.<br />
2000, pp 1119–1125.<br />
[3] Hoover, J. M.; Stahl, S. S.; Carreira, E. M. Org. Synth. 2013, 90 (I), 240–250.Shinpuku, Y.; Inui, F.; Nakai, M.;<br />
Nakabayashi, Y. J. Photochem. Photobiol. A Chem. 2011, 222 (1), 203–209.<br />
[4] Heller, M.; Schubert, U. S. J. Org. Chem. 2002, 67 (23), 8269–8272<br />
47
Wouter Bierens<br />
ATGM academie voor Technologie Gezondheid en Milieu<br />
Avans University <strong>of</strong> Applied Sciences, Breda<br />
PDT (Photo Dynamic Treatment) is a cancer treatment specifically targeting the tumors by irradiating the tumors<br />
with light, this will activate the cytotoxic properties <strong>of</strong> a photo dynamic medicine. By radiating the tumor, only the<br />
tumor will be targeted which is an advantage over chemotherapy which will kill not only cancerous cells, but also<br />
the healthy cells. The complex [Ru(tpy)(bpy)Cl]2+ Bis(N-biotinyl)-3,6-dioxaoctane-1,8-diamine is a photo dynamic<br />
medicine. The biotin compound will bind with avidine receptors <strong>of</strong> tumor cells. When irradiated the biotin ligand<br />
on the ruthenium complex will be substituted by water which allows the rutheniumcomplex to attack the DNA <strong>of</strong><br />
the cell. This research focuses on the synthesis <strong>of</strong> Bis(N-biotinyl)-3,6-dioxaoctane-1,8-diamine. By coupling the<br />
biotin molecule to diaminodioxoctane with a couplingagent through a two steps synthesis. Different<br />
couplingagents (Disuccinimidylcarbonate, COMU, HATU, DCI and DEPT) was compared to eachother in order to<br />
determine the best conversion. The crude product was purified with flash chromatography and analyzed with<br />
Hnmr and LC-MS.<br />
HN<br />
O<br />
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OH<br />
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N<br />
O O<br />
N<br />
Et 3<br />
N<br />
DMF, RT, 16 uur<br />
O<br />
HN<br />
O<br />
S<br />
NH<br />
O<br />
O<br />
O<br />
N<br />
O<br />
N H 2<br />
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Et 3<br />
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DMF, RT, 26 uur<br />
NH 2<br />
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[1] Synthesis <strong>of</strong> a biotin-functionalized ruthenium complex with a light-cleavable biotin moiety. Bianka Siewert,<br />
Michiel Langerman, Sylvestre Bonnet. unpublished results.<br />
[2] In vitro evaluation <strong>of</strong> ruthenium complexes for photodynamic therapy. Wenna Lia, Qiang Xieb, Linglin Laia,<br />
Zhentao Moa, Xia<strong>of</strong>ang Penga, Ennian Lenga, Dandan Zhanga, Hongxia Suna, Yiqi Lia, Wenjie Meic, Shuying<br />
Gaoa. Junie <strong>2017</strong>, Photodiagnosis and Photodynamic Therapy, volume 18.<br />
[3] COMU: A Safer and More Effective Replacement for Benzotriazole-Based Uronium Coupling Reagents . El-<br />
Faham, A., et al. 15, Chemistry a European Journal, Vol. 2009, pp. 9404-9416.<br />
48
Jari Bos<br />
ATGM Academy <strong>of</strong> Technology Health and Environment<br />
Avans University, Breda<br />
Radboud University, Nijmegen<br />
Protein misfolding is a change <strong>of</strong> the three-dimensional form <strong>of</strong> a protein. What leads to a change in functionality.<br />
Sometimes misfolding can cause toxic proteins what can lead to elderly diseases like Alzheimer and Parkinson. [1]<br />
The Radboud University is IR folding <strong>of</strong> proteins in gas phase. For this, four dipeptides are made: carboxybenzilalanine-alanine-methyl<br />
ester, carboxybenzil-alanine-alanine-amide, acetyl-phenylalanine-alanine-methyl ester<br />
and acetyl-phenylalanine-alanine-amide. The two methyl ester dipeptides are synthesised with coupling agent<br />
COMU. Which has a high theoretical yield (99%). [2] The two methyl ester dipeptides are converted to the amide<br />
products by an ammonolysis with ammonium hydroxide. Al the dipeptides are purified by column chromatography<br />
and analysed by FTIR, LC-MS.<br />
[1] N. Bolshette, K. Thakur, A. Bidkar, C. Trandafir, P. Kumar en R. Gogoi, ‘’Protein folding and misfolding in the<br />
neurodegenerative disorders: A review,” Revue Neurologique , vol. 170, nr. 3, pp. 151-161, 2014.<br />
[2] A. El-Fahama en F. Albericio, ‘’COMU: A third generation <strong>of</strong> uronium-type coupling reagents,” journal <strong>of</strong><br />
peptide science, vol. 16, nr. 1, pp. 6-9, 2009.<br />
49
Sem Goossens<br />
ATGM Academie voor Technologie Gezondheid en Milieu<br />
Avans Hogeschool, Breda<br />
University Leiden<br />
Indole is a heterocyclic aromatic compound. It is a compound common in nature and is widely used in the<br />
pharmaceutical industry. [1] The indoles in this research will be used for synthesis cyanine dyes. The Indole<br />
derivatives will be connected with polymethine chains, the cyanine dyes will be Infrared active. The cyanine dyes<br />
are used in cancer research and has a function as label. Because <strong>of</strong> this, the cellular process can be followed, like<br />
medication that will arrive in tumors. [2] Indoles/cyanine dyes have a poor solubility in water, so it is badly<br />
absorbed in the human body. Therefore, there will be synthesized different indole derivatives with water-soluble<br />
side groups. Sulfonic acid is an example <strong>of</strong> a side group that will be used. The indole derivatives will be synthesized<br />
with the Fischer Indole synthesis, under acid conditions. [3] The purification will be done with column<br />
chromatography. The characterization will be done with H-NMR and FTIR.<br />
Keywords: Indole • Sulfonic acid • Cyanine Dyes • Fisher Indole Synthesis.<br />
[1] G. W. Gribble, Tetrahedron Organic Chemistry Series, Volume 20, 2000, p. 73 – 75.<br />
[2] S. Luo et al., “A review <strong>of</strong> NIR dyes in cancer targeting and imaging,” Journal <strong>of</strong> Biomaterials, vol. 32, 2011, p.<br />
7127-7138<br />
[3] D. J. Kim e.a., Novel Cyanine Dyes with Vinylsulfone Group for Labeling Biomolecules, Bioconjugate<br />
Chemistry, Korea<br />
50
Fabian van Acker<br />
ATGM Academy <strong>of</strong> Technology, Health and Environment<br />
Avans Hogeschool, Breda<br />
Lies Bouwman<br />
1,2,4,5-tetrakis(broommethyl)benzene in this research is used to synthezise ligand for metal complexes. About<br />
the substance itself is little known but the reaction mechanism which we see in the table <strong>of</strong> content and which is<br />
described by J. Verhagen could be synthesized a ligand with the substance. With the ligand we can create metal<br />
complexes that can be used for hydrogenase as a replacement for enzymes. [1] The purpose <strong>of</strong> this research is to<br />
see if the expected ligand can actually be synthesized and whether the return achieved by J. Verhagen and S.<br />
Verbeek could be matched to their research. [2] The expected yield will be around 80% with a 10% deviation. In<br />
addition the metal complex will be synthesized by S. Verbeek in Leiden and researched which properties the<br />
complex has. [3]<br />
[1] Verhagen, J. A. W.; Beretta, M.; Spek, A. L.; Bouwman, E. Inorg. Chim. Acta 2004, 357 (9), 2687–2693<br />
[2] Verhagen, J. A. W.; Ellis, D. D.; Lutz, M.; Spek, A. L.; Bouwman, E. J. Chem. Soc. Dalt. Trans. 2002, Nr. 7,<br />
1275–1280.<br />
[3] Verbeek, S. 2016. Unpublished results.<br />
51
Cas van Deursen<br />
ATGM Academy <strong>of</strong> Technology, Health and Environment<br />
Avans Hogeschool Breda<br />
Paula Contreras Carballada, Anouk Rijs<br />
In dit onderzoek zijn N-carboxybenzyl-L-alanine-L-alanine-methylester (Z-ala-ala-OMe), N-carboxybenzyl-Lalanine-L-alanine<br />
(Z-ala-ala), N-acetyl-L-phenylalanine-L-alanine-methylester (Ac-phe-ala-OMe) en N-acetylphenylalanine-L-alanine<br />
(Ac-phe-ala) gesynthetiseerd, opgezuiverd en geanalyseerd voor verder onderzoek naar<br />
de stapeling van deze dipeptiden. Z-ala-ala-OMe is gesynthetiseerd door N-carboxybenzyl-L-alanine, L-Alaninemethylester,<br />
N,N-Diisopropylethylamine en COMU samen te voegen en gedurende 2 uur te roeren bij<br />
kamertemperatuur. Ac-phe-Ala-OMe is gesynthetiseerd op dezelfde wijze, waarbij de Z-ala werd vervangen door<br />
Ac-phe. Z-ala-ala en Ac-phe-ala werden verkregen door Z-ala-ala-OMe en Ac-phe-ala-OMe te hydrolyseren met<br />
LiOH. De verkregen producten werden gekarakteriseerd met behulp van FTIR en opgezuiverd met behulp van een<br />
silicakolom. De opgezuiverde producten zijn vervolgens met LC/MS onderzocht om verontreinigingen uit te<br />
sluiten. De opbrengst van de syntheses van Z-ala-ala-OMe, Z-ala-ala, Ac-phe-ala-OMe en Ac-phe-ala waren<br />
respectievelijk 78, 90, 74 en 91%. Er word aangeraden om de syntheses van Z-ala-ala-OMe en Ac-phe-ala-OMe<br />
gedurende 6 i.p.v. 2 uur te laten lopen om op deze manier een hogere opbrengst te behalen.<br />
[1] Volledig: (1-[1-(cyano-2-ethoxy-2-oxoethylideen-aminooxy)-dimethylamino-morpholino]-uronium<br />
heafluor<strong>of</strong>osfaat<br />
52
Koen Segers, Avans Hogeschool, <strong>SPOC</strong> groep 6, <strong>2017</strong>, Paula Contreras Carballada<br />
The folding <strong>of</strong> proteins from linear amino-acid sequences into active three-dimensional structures is a process<br />
essential for exhibiting protein functionality such as, catalysis, ligand binding and signal transduction. When<br />
proteins fail to fold correctly, misfolding occurs which can yield inactive proteins but in some cases may result in<br />
an aggregation <strong>of</strong> proteins with toxic properties. The misfolding and associated aggregation <strong>of</strong> proteins in the<br />
human body is a characteristic feature <strong>of</strong> numerous neurodegenerative diseases including Alzheimer’s,<br />
Parkinson’s, and ALS. Understanding the underlying mechanisms <strong>of</strong> protein folding and misfolding is <strong>of</strong> great<br />
importance <strong>of</strong> curing earlier named diseases. [1]<br />
The Molecular and Biophysics group <strong>of</strong> FELIX (free electron laser<br />
laboratory) performs studies on peptide aggregation. [2] Four<br />
dipeptides were chosen as model compounds, Z-Ala-Ala-OMe<br />
(1), Ac-Phe-Ala-OMe (2), Z-Ala-Ala-NHMe (3) and Ac-Phe-Ala-<br />
NHMe (4), see structures below. This project aims to synthesize<br />
pure samples <strong>of</strong> dipeptides by using a novel coupling agent<br />
COMU, in order to optimize yield, safety and cost compared to<br />
HATU coupling. [3] Further purification <strong>of</strong> synthesis products is<br />
done by column chromatography, fractions are characterized by<br />
LC-MS.<br />
Figure 1 - The four model peptides chosen for IR-folding studies<br />
Keywords: Protein Folding • Peptide synthesis • COMU coupling • LC-MS<br />
The general reaction mechanism for the synthesis <strong>of</strong> a dipeptide with COMU coupling and DIPEA is shown in figure<br />
2. In this project, the R1-group is Z-Ala or Ac-Phe and the R2-group is Ala-Ome. After deprotonation <strong>of</strong> the peptide<br />
by DIPEA, A nucleophilic oxygen is formed on the amino acid which attacks the carbocation on the COMU coupling<br />
agent. The nucleophilic oxygen on the resulting deprotonated Oxyma group attacks on the carbonyl <strong>of</strong> the amino<br />
acid/morpholino intermediate, pushing the morpholino group <strong>of</strong>f. This is followed by the formation <strong>of</strong> the peptide<br />
coupled to Oxyma pure. A deprotonated amino acid then attacks the carbonyl <strong>of</strong> Z-ala/Oxyma pure to produce<br />
the coupled amino acids.<br />
Figure 2 - General reaction mechanism <strong>of</strong> a dipeptide synthesis utilizing COMU as coupling agent<br />
[1] M. Stefani and C. M. Dobson, "Protein aggregation and aggregate toxicity: new insights into protein folding,<br />
misfolding diseases and biological evolution," J. Mol. Med., 2003.<br />
[2] A. M. Rijs, "Gas-Phase IR-spectroscopy and structure <strong>of</strong> biological molecules," Topics in Current Chemistry.<br />
2015<br />
[3] A. El-Fahman, "COMU: A Safer and More Effective Replacement for Benzotriazole-Based Uronium Coupling<br />
Reagent," Chem. Eur. J., 2009<br />
53
54
Dear readers,<br />
After a lot <strong>of</strong> planning, experiments, setbacks and joys, the minor <strong>SPOC</strong> 2016-<strong>2017</strong> has come<br />
to an end. The results <strong>of</strong> this hard work are presented at the <strong>SPOC</strong> Poster Presentation to<br />
which this <strong>Book</strong> <strong>of</strong> <strong>Abstracts</strong> is an inseparable part. We have learned a lot during this minor,<br />
both pr<strong>of</strong>essionally as well as personally and for their help we have to thank all contributors<br />
who helped in the successful completion <strong>of</strong> the projects during the past 20 weeks.<br />
Firstly, we would like to thank the accompanying teachers: Sonny van Seeters, Kees Kruith<strong>of</strong>,<br />
Jack van Schijndel, Nishant Sewgobind, Paula Contreras-Carballada and Erik Rump for their<br />
great guidance, nudges in the right direction and feedback. Without your guidance, it<br />
wouldn’t have been possible to achieve the same level <strong>of</strong> quality in the completion <strong>of</strong> our<br />
projects.<br />
Furthermore, we want to thank the technical staff; Frank Luijkx, Frank Welling, Cynthia van<br />
den Berg, Laura van de Corput-Mensen, Marieke Tellekamp, Koen van Beurden, Thomas<br />
Ravensbergen and Dennis Molendijk for their support during the implementation <strong>of</strong> the<br />
projects and help with difficulties in the lab. A very special thank you goes to Edward Knaven<br />
for his efforts to analyze our synthetic compounds with LC-MS. Also, we would like to thank<br />
Annemarie Zweedijk-Thijssen for the ordering <strong>of</strong> chemicals and Anita Konings for the always<br />
clean glassware.<br />
Last but not least, we want to thank the research project providers for very interesting project<br />
topics and their critical view on the results.<br />
Without these people <strong>SPOC</strong> 2016-<strong>2017</strong> wouldn’t have been the same.<br />
With kind regards,<br />
The students <strong>of</strong> <strong>SPOC</strong> 2016-<strong>2017</strong><br />
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v.l.n.r.: Paula, Annabelle, Justin, Koen<br />
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