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Mapping 250K/500K SNP assay

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16 GeneChip ® <strong>Mapping</strong> <strong>500K</strong> Assay Manual<br />

Meyerson, M.L., Fisher, D.E., Sellers, W.R. Integrative genomic<br />

analyses identify MITF as a lineage survival oncogene amplified in<br />

malignant melanoma. Nature 436:117-22 (2005).<br />

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P., Maner, S., Massa, H., Walker, M., Chi, M., Navin, N., Lucito,<br />

R., Healy, J., Hicks, J., Ye, K., Reiner, A., Gilliam, T.C., Trask,<br />

B., Patterson, N., Zetterberg, A., Wigler, M. Large-scale copy<br />

number polymorphism in the human genome. Science 305:525-8<br />

(2004).<br />

58. Sharp, A.J., Locke, D.P., McGrath, S.D., Cheng, Z., Bailey, J.A.,<br />

Vallente, R.U., Pertz, L.M., Clark, R.A., Schwartz, S., Segraves,<br />

R., Oseroff, V.V., Albertson, D.G., Pinkel, D., Eichler, E.E.<br />

Segmental duplications and copy-number variation in the human<br />

genome. Am J Hum Genet 77:78-88 (2005).<br />

59. Tuzun, E., Sharp, A.J., Bailey, J.A., Kaul, R., Morrison, V.A.,<br />

Pertz, L.M., Haugen, E., Hayden, H., Albertson, D., Pinkel, D.,<br />

Olson, M.V., Eichler, E.E. Fine-scale structural variation of the human<br />

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60. Iafrate, A.J., Feuk, L., Rivera, M.N., Listewnik, M.L., Donahoe,<br />

P.K., Qi, Y., Scherer, S.W., Lee, C. Detection of large-scale<br />

variation in the human genome. Nat Genet 36:949-51 (2004).<br />

61. Shriver, M.D., Kennedy, G.C., Parra, E.J., Lawson, H.A., Sonpar,<br />

V., Huang, J., Akey, J.M., Jones, K.W. The genomic distribution<br />

of population substructure in four populations using 8,525<br />

autosomal <strong>SNP</strong>s. Hum Genomics 1:274-86 (2004).<br />

62. Shriver, M.D., Mei, R., Parra, E.J., Sonpar, V., Halder, I.,<br />

Tishkoff, S.A., Schurr, T.G., Zhadanov, S.I., Osipova, L.P.,<br />

Brutsaert, T.D., Friedlaender, J., Jorde, L.B., Watkins, W.S.,<br />

Bamshad, M.J., Gutierrez, G., Loi, H., Matsuzaki, H., Kittles, R.<br />

A., Argyropoulos, G., Fernandez, J.R., Akey, J.M., Jones, K.W.<br />

Large-scale <strong>SNP</strong> analysis reveals clustered and continuous patterns<br />

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63. Cardon, L.R., Abecasis, G.R. Using haplotype blocks to map<br />

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