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Staff Members of the Institute of Biochemistry, TU - Institut für ...

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incomplete and did not provide <strong>the</strong> complete picture <strong>of</strong> <strong>the</strong> yeast lipid particle proteome. For<br />

this reason, a more precise lipid particle proteome analysis was initiated in collaboration with<br />

M. Karas from <strong>the</strong> <strong><strong>Institut</strong>e</strong> <strong>of</strong> Pharmaceutical Chemistry, Johann Wolfgang Goe<strong>the</strong><br />

University, Frankfurt, Germany. This proteome study was combined with a lipidomics<br />

investigation that was performed in collaboration with H. Köfeler from <strong>the</strong> Center for Medical<br />

Research, Medical University <strong>of</strong> Graz, Austria. In this study, we compared lipid particle<br />

components from cells which were grown on glucose or on oleic acid. This approach<br />

identified a number <strong>of</strong> lipid particle proteins that were already known but also some novel<br />

polypeptide candidates. Detailed investigations <strong>of</strong> <strong>the</strong>se proteins are currently in progress. We<br />

also realized through this approach that <strong>the</strong>re were some differences in <strong>the</strong> lipid particle<br />

proteome from cells grown on glucose or oleic acid. Finally, mass spectrometric analyses<br />

revealed marked differences in <strong>the</strong> lipidome <strong>of</strong> lipid particles from cells grown on <strong>the</strong> two<br />

different carbon sources. This study sets <strong>the</strong> stage for fur<strong>the</strong>r investigation <strong>of</strong> protein-lipid<br />

interaction on <strong>the</strong> surface <strong>of</strong> lipid particles and provides basic evidence for <strong>the</strong> coordinated<br />

biosyn<strong>the</strong>sis <strong>of</strong> lipid and protein components from lipid particles.<br />

Ano<strong>the</strong>r important aspect <strong>of</strong> this study was <strong>the</strong> physiological relevance <strong>of</strong> TAG and STE<br />

depot formation. Therefore, attempts were made to understand cell biological consequences <strong>of</strong><br />

dysfunctions in neutral lipid storage. Previously, it has been reported that yeast cells lacking<br />

neutral lipid depots appear to become apoptotic. More recently, we and o<strong>the</strong>rs were able to<br />

demonstrate that lipid depot formation plays an important role especially when yeast cells are<br />

stressed in <strong>the</strong> presence <strong>of</strong> exogenous fatty acids. However, it appears that an adaptation to<br />

this stress situation occurs which helps to overcome <strong>the</strong> deleterious effect <strong>of</strong> this lipotoxic<br />

stress. Changes in <strong>the</strong> lipid pattern caused by cultivation <strong>of</strong> yeast cells on oleic acid are<br />

currently investigated in some detail.<br />

In a previous study we had observed that variation <strong>of</strong> <strong>the</strong> yeast lipid particle composition by<br />

deletion <strong>of</strong> ei<strong>the</strong>r TAG or STE syn<strong>the</strong>sizing enzymes led to changes in <strong>the</strong> protein pattern on<br />

<strong>the</strong> lipid particle surface. In particular we realized that Erg1p, which is present at large<br />

amounts on lipid particles <strong>of</strong> wild type cells, loses stability in strains missing STE. During an<br />

ongoing project we performed stability and topology studies with different variants and<br />

constructs <strong>of</strong> Erg1p to elucidate embedding <strong>of</strong> this protein in <strong>the</strong> lipid particle surface<br />

membrane. This problem is related to <strong>the</strong> general question how lipid particle proteins are<br />

anchored in <strong>the</strong> monolayer membrane <strong>of</strong> <strong>the</strong> particle and/or interact with <strong>the</strong> hydrophobic core<br />

<strong>of</strong> <strong>the</strong> compartment. Although <strong>the</strong> evidence obtained so far is only preliminary we believe that<br />

<strong>the</strong> lipid status <strong>of</strong> lipid particles has a direct influence on <strong>the</strong> protein equipment <strong>of</strong> this<br />

compartment. This link may be related to <strong>the</strong> biogenesis <strong>of</strong> lipid particles.<br />

Ano<strong>the</strong>r potential non-polar storage lipid is squalene. This component belongs to <strong>the</strong> group <strong>of</strong><br />

isoprenoids and is precursor for <strong>the</strong> syn<strong>the</strong>sis <strong>of</strong> sterols, steroids and ubiquinons. In <strong>the</strong> yeast,<br />

<strong>the</strong> amount <strong>of</strong> squalene can be increased by varying culture conditions or by genetic<br />

manipulation. As an example, in strains deleted <strong>of</strong> HEM1 squalene accumulates and is stored<br />

mainly in lipid particles. Interestingly, a heme deficient dga1∆lro1∆are1∆are2∆ quadruple<br />

mutant (Qhem1∆) which is devoid <strong>of</strong> <strong>the</strong> classical storage lipids, TAG and SE, accumulates<br />

substantial amounts <strong>of</strong> squalene in cellular membranes, especially in microsomes and <strong>the</strong><br />

plasma membrane. The fact that Qhem1∆ does not form lipid particles suggests that<br />

biogenesis <strong>of</strong> <strong>the</strong>se storage particles cannot be initiated by squalene which is syn<strong>the</strong>sized in<br />

<strong>the</strong> ER similar to TAG and SE. This result also indicates that squalene accumulation, at least<br />

under <strong>the</strong> conditions tested, is not lipotoxic. Finally, our experiments demonstrate that<br />

squalene incorporated into organelle membranes does not compromise cellular function.<br />

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