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Results and Discussion<br />

3.2.1 Electrochemical impedance spectroscopy. DNA assay build-up<br />

Electrochemical impedance spectroscopy is based on applying a DC potential that is commonly<br />

an open circuit potential superimposed with an AC potential of small amplitude. Measuring of<br />

the resulting AC current signal allows sampling of modulus and phase of the response. The<br />

impedance is usually presented by plotting the real and imaginary components in a Nyquist<br />

plot. The principle of the method is explained in detail in Section 5.13.1.<br />

In this study, a modified Randles equivalent electric circuit was used for modelling the behavior<br />

of the electrode surface during each step of the DNA assay build-up (Figure 3.5). In the circuit,<br />

a solution resistance (Rs) is connected in series with a constant phase element (CPE), which<br />

represents the double layer by taking into account the roughness of a polycrystalline gold<br />

electrode, and an impedance of a faradaic reaction (consisting of a charge transfer resistance,<br />

Rct, and a Warburg element representing the semi-infinite linear diffusion of electroactive<br />

species to a flat electrode, W). Since the alteration of Rct is most pronounced as compared to<br />

other electric circuit elements, the change of Rct was followed during surface preparation.<br />

Figure 3.5. Randles equivalent electric circuit used for fitting of Nyquist plots obtained<br />

during the DNA assay preparation. Rs represents the solution resistance, Rct is the charge<br />

transfer resistance, CPE is a constant phase element representing the double layer and W<br />

is the Warburg element representing diffusion.<br />

The interpretation of the properties of DNA-modified gold electrode surfaces by means of EIS<br />

was based on the repulsion of a negatively charged free-diffusing redox mediator, namely<br />

[Fe(CN)6] 3-/4- , from the DNA-modified electrode in a solution of moderate ionic strength 3 . The<br />

extent of the DNA charge screening depends on the ionic strength of the solution above a certain<br />

3.2 Importance of knowing the surface 35

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