DISSERTATION
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______________________________________________________________________ Introduction<br />
(adenine and guanine). Adenine binds only to thymine, forming two hydrogen bonds, and<br />
cytosine binds exclusively to guanine, forming three hydrogen bonds.<br />
Figure 1.3. Scheme of the primary DNA structure.<br />
Two complementary DNA strands (single-stranded DNA, ssDNA) coil around the same axis<br />
forming a double helix (double-stranded DNA, dsDNA). This way hydrophobic bases are inside<br />
the helix and the hydrophilic sugar-phosphate backbone is orientated outside (Figure 1.4). Both<br />
DNA strands store the same biological information, that is, the nucleobase sequence. However,<br />
they can bind only in an antiparallel disposition, which means that the strands are orientated in<br />
opposite directions, one in the direction 3' to 5' and the other from 5' to 3'. The 5' end has a<br />
terminal phosphate group, while the 3' end, a terminal hydroxyl group. DNA can form three<br />
conformations – A, B and Z. B-DNA is a right-handed conformation, where each full turn in<br />
the helix is 3.4 nm long and consists of ten bases (thus with 0.34 nm between adjacent bases).<br />
A-DNA is also right-handed and it occurs when the humidity is lower than 75 %. In this<br />
conformation the base pairs are not perpendicular to the helix axis, resulting in a wider and<br />
1.2 DNA 7