19.09.2015 Views

TABLE CONTENTS

How different or similar are nematode communities - International ...

How different or similar are nematode communities - International ...

SHOW MORE
SHOW LESS

Create successful ePaper yourself

Turn your PDF publications into a flip-book with our unique Google optimized e-Paper software.

Molecular Characterization of Bursaphelenchus (Nematoda:<br />

Parasitaphelenchidae) spp. Distributed in Korea Based on ITS and D2D3<br />

in rDNA Sequence Analysis<br />

Han, H., B-Y. Han, Y-J. Chung & S-C. Shin<br />

Division of Forest Insect Pests and Diseases, Department of Environmental Forest Korea Forest Research<br />

Institute, Seoul, Korea (ROK), 130-712.<br />

Pine wood nematode (PWN), Bursaphelenchus xylophilus, is a causal organism in inducing<br />

pine wilt disease (PWD) in many varieties of pine trees. PWD was first introduced to Korea<br />

in 1988, but the damage increased dramatically since 2000. Recently PWD was newly<br />

reported in Korean pine trees (Pinus koraiensis) and is considered one of the most important<br />

forest diseases in Korea. Fifteen isolates of B. xylophilus, 3 isolates of B. mucronatus, and 2<br />

unidentified Bursaphelenchus spp. were collected from different geographical locations and<br />

hosts in Korea, and were characterized by ITS and D2D3 rDNA sequence analysis. Template<br />

DNA was prepared by DNA extraction from a single female nematode. ITS and D2D3<br />

regions were amplified by PCR and followed by cloning and sequence. As a result, all the<br />

sequences of ITS and D2D3 from B. xyophilus isolates were identical and there is no<br />

intraspecific variation. However, 2 genotypes of B. mucronatus were found, one from P.<br />

thunbergii was East Asia type and the other from P. koraiensis was European type. The data<br />

of two unknown species of Busaphelenchus sp.(A) and Bursaphelenchus sp.(B) were closely<br />

related to B. tusciae and B. lini, respectively, which was also supported by morphological<br />

characterization. The amplified size of ITS and D2D3 for all isolates were 950bp and 750bp,<br />

respectively. The only exception was for Busrsaphelenchus sp.(B). because it has 1.2 kb in<br />

ITS size. ITS-RFLP data also discriminated between different species and genotypes by using<br />

5 enzymes of Hinf I, Alu I, Msp I, Hae III, Rsa I. Bursaphelenchus conicaudatus was used as<br />

the control species for this experiment, and informative nucleotide sequences of<br />

Bursaphelenchus were downloaded from GenBank in NCBI. All DNA sequence data were<br />

aligned by using Clustal W program and molecular phylogenetic analysis was performed by<br />

PAUP*4.0.<br />

5 th International Congress of Nematology, 2008 58

Hooray! Your file is uploaded and ready to be published.

Saved successfully!

Ooh no, something went wrong!