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Quantitative Detection of the Major Plant-parasitic Nematodes in Japan<br />

using Real-time PCR<br />

Toyota, K., E. Sato, T. Shirakashi & Y.Y. Min<br />

Graduate School of Bio-Applications and Systems Engineering, Tokyo University of Agriculture and<br />

Technology, Koganei, Tokyo 184-8588, Japan<br />

Four primer sets in real-time PCR were designed for the quantitative detection of the rootlesion<br />

nematode (Pratylenchus penetrans), the root-knot nematode (Meloidogyne incognita),<br />

the potato cyst nematode (Globodera rostochiensis) and the soybean cyst nematode<br />

(Heterodera glycine). These primer sets were highly specific to the corresponding species<br />

according to the previous sequences in database, except for the one for M. incognita, which<br />

will detect M. arenaria and M. javanica. Different numbers of the second-stage juveniles<br />

(J2) of P. penetrans were mixed with various stages of free-living nematodes and then DNA<br />

was extracted from the nematode mixture. There was a significant correlation between the Ct<br />

values and the number of P. pentrans added. Highly significant correlations were also<br />

observed in M. incognita, G. rostochiensis and H. glycine. Real-time PCR sensitively<br />

detected only a single plant-parasitic nematode in 200 to 1000 individuals of free-living<br />

nematodes. This study demonstrated that real-time PCR assay for the major plant-parasitic<br />

nematodes provides a sensitive and reliable means for the rapid quantification of the<br />

vermiform pests<br />

Application of Taylor's Power Law to Sample Statistics of Nematodes<br />

Associated with Cucurbits in Egypt<br />

Abd-Elgawad , M.M. (1), A.E. Wahab (2), F.H. Koura (1), M.M.A. Hammam & S. Haroon<br />

(1) Phytopathology Department, National Research Center, El-Tahrir St., Dokki 12622, Giza, Egypt; (2)<br />

Department of Agriculural Zoology and Nematology, Faculty of Agriculture, Al-Azhar University.<br />

Taylor's power law could be fitted (P ≤ 0.01) to most of the common nematode genera<br />

extracted from the rhizosphere of cucurbitaceous crops in Egypt. These nematode genera<br />

were arranged in an ascending order according to their index of dispersion (represented by<br />

slope values of the power law) in soil as follows: Tylenchus, Pratylenchus,<br />

Tylenchorhynchus, Heterodera, Meloidogyne and Hirschmanniella. The spatial distribution<br />

of most nematode genera was aggregated which can confound parametric statistical analyses<br />

necessary to study their effects on the different cucurbitaceous hosts. Yet, approaches based<br />

on estimate of such dispersion indices may be used to solve these problems and in the development<br />

and evaluation of control measures. Also, the law was used for sample size<br />

optimization. For example, to sample Tylenchus spp. and Meloidogyne spp. from one feddan<br />

(4200 m2) cucurbitaceous area with a 0.25 standard error to mean ratio and 5 nematodes/100<br />

gm soil, one could collect one and twenty samples, respectively.<br />

5 th International Congress of Nematology, 2008 325

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