19.09.2015 Views

TABLE CONTENTS

How different or similar are nematode communities - International ...

How different or similar are nematode communities - International ...

SHOW MORE
SHOW LESS

Create successful ePaper yourself

Turn your PDF publications into a flip-book with our unique Google optimized e-Paper software.

SESSION FORTY-SEVEN – NEMATODE BARCODING, BIODIVERSITY<br />

AND ECOLOGY<br />

CONVENORS: ANTOINETTE SWART & TOM POWERS<br />

A New Globodera Cyst from South Africa<br />

Knoetze, R. (1) & A. Swart (2)<br />

(1) Directorate Plant Health, Department of Agriculture, Private Bag X5015, Stellenbosch, 7599 South Africa;<br />

(2) Biosystematics Division, ARC-PPRI, Private Bag X134, Queenswood, 0121, South Africa<br />

Nematode cysts from potato fields in the Sandveld area in South Africa were collected during<br />

a delimiting survey for the presence of potato cyst nematodes in the region. Morphological<br />

and molecular analysis of the cysts confirmed the presence of G. rostochiensis, as well as an<br />

unknown Globodera species in the samples. The rDNA Internal Transcribed Spacer Region<br />

of the nematodes were amplified by PCR and sequenced. The sequences obtained from some<br />

populations were almost identical to G. rostochiensis sequences obtained from Genbank,<br />

while sequences from other populations were not similar to either G. rostochiensis or G.<br />

pallida., containing 38 point mutations and 12 insertions when compared to G. rostochiensis.<br />

Morphologically the cysts of the unknown Globodera sp. varies in colour from yellow to<br />

brown and are subspherical with a protruding neck. The vulval region is circumfenestrate and<br />

in 50% of the cysts small or large cuticular thickenings (bullae or vulval bodies) are present<br />

around the vulval basin, sometimes stretching to the anus and beyond. In some aspects this<br />

species resemble G. rostochiensis (presence in potato fields and some aspects of the<br />

morphology of the J2 and cyst), G. pallida (presence in potato fields and aspects of the<br />

morphology of the J2 and cyst), G. achilleae (stylet of J2 and morphology of the cyst) and G.<br />

millefolii (morphology of the cyst, especially the presence of bullae). The unknown cysts<br />

showed no signs of hatching when incubated in potato root exudate at 20°C. Inoculation of<br />

germinating potato tubers with larvae from the unknown Globodera sp. and incubation at<br />

20°C did not result in any reproduction after 14 weeks. Low numbers of these cysts were<br />

found in the soil and no damage was reported in this area. A number of indigenous plants and<br />

weeds were screened as possible hosts of the cyst.<br />

Connecting MOTUs and Morphology: Results from a Neotropical<br />

Rainforest<br />

Powers, T. (1), A. Esquivel (2), R. Giblin-Davis (3), P. Mullin (1), D. Neher (4), S.P. Stock<br />

(5), M. Mora (6) & L. Uribe (6)<br />

(1) Department of Plant Pathology, University of Nebraska, Lincoln, USA; (2) Facultad de Ciencias Agrarias,<br />

Universidad Nacional Autónoma , Heredia, CR; (3)Institute of Food and Agricultural Sciences, University of<br />

Florida, Fort Lauderdale, USA; (4) Plant and Soil Science Department, University of Vermont, Burlington,<br />

USA; (5) Department of Entomology, University of Arizona, Tucson, USA; (6)Centro de Investigación en<br />

Biologia Celular y Molecular, Universidad de Costa Rica, San José, CR<br />

In March of 2005 nematode collections were made at La Selva Biological Research Station,<br />

located near the Caribbean coast of Costa Rica. The objective was to determine the nematode<br />

species diversity in the humid rainforest and to explore the possibility that nematode<br />

communities were stratified among soil, litter, and understory habitats. An 18S ribosomal<br />

barcode was used to generate 167 molecular operational taxonomic units (MOTUs) from 360<br />

5 th International Congress of Nematology, 2008 172

Hooray! Your file is uploaded and ready to be published.

Saved successfully!

Ooh no, something went wrong!