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<strong>International</strong> <strong>Journal</strong> <strong>of</strong> <strong>Advanced</strong> <strong>Life</strong> <strong>Sciences</strong> (IJALS)<br />

Int. j. Adv. Lif. Sci., Available online on at www.<br />

Int. J. Adv. Lif. Sci., Available online on at www. ijals.com<br />

ISSN<br />

2277 – 758X<br />

Umamaheswari et al., IJALS, Vol.3. May - 2012. RESEARCH ARTICLE<br />

Introduction<br />

Studies on biodegradation <strong>of</strong> pesticides contaminants soil by using<br />

Tremetes versicolor and Phanerochaete chrysosporium<br />

G. Umamaheswari * , V. Ramamurthy ** , S. Raveendran *** , K. Radhika *** and A. Kavitha Amirthanayagi ***<br />

* Post Graduate and Research Department <strong>of</strong> Biotechnology, Marudupandiyar College, Vallam,<br />

Thanjavur – 403. Tamil Nadu. ** Post Graduate and Research Department <strong>of</strong> Biochemistry,<br />

Marudupandiyar College, Vallam, Thanjavur - 403, Thanjavur District, Tamil Nadu.<br />

*** P.G & Research Department <strong>of</strong> Zoology, Khadir Mohideen College, Adirampattinam - 614 701,<br />

Thanjavur District, Tamil Nadu.<br />

Email : v.ramamoorthy07@gmail.com<br />

Corresponding Author<br />

V. Ramamurthy<br />

Post Graduate and Research<br />

Department <strong>of</strong> Biochemistry,<br />

Marudupandiyar College,<br />

Vallam, Thanjavur - 613 403,<br />

E-mail: v.ramamoorthy07@gmail.com<br />

Article History<br />

Received on 12 March, 2012;<br />

Revised in revised form 4 April,<br />

2012; Accepted 22 April, 2012<br />

Abstract<br />

Currently more number <strong>of</strong> possible mechanisms<br />

is available to clean up <strong>of</strong> pesticides in soil, viz<br />

chemical treatment, volatilization and incineration.<br />

Chemical treatment and volatilization are feasible and<br />

are problematic as large volumes <strong>of</strong> acids and alkalis<br />

are produced and subsequently must be disposed <strong>of</strong> by<br />

incineration, which is a very reliable method for<br />

destruction <strong>of</strong> these compounds, has met serious<br />

public opposition, because <strong>of</strong> its potentially toxic<br />

emissions, and its elevated economic costs (Kearney<br />

and Wauchope, 1998; Zhang and Chiao, 2002). Overall<br />

most <strong>of</strong> these physico-chemical cleaning technologies<br />

Among the various soil contaminants, pesticides are <strong>of</strong> primary<br />

importance due to their continuous entry into the soil environment. However, in<br />

un-sterilized and untreated soils, pesticide degradation rate was at the medium<br />

when compared to the sterilized soil indicating that the soil microorganisms play<br />

an important role in pesticide degradation. The pesticides were reduced in their<br />

level after the treatment <strong>of</strong> bacterial isolates. Totally three different pesticide such<br />

as simazine, trifluralin and dieldrin was recorded in soil extract through HPLC.<br />

Among the pesticide simazine was recorded maximum than trifluralin and<br />

dieldrin. The results obtained in this study provide valuable knowledge on the<br />

abilities <strong>of</strong> T.versicolor and P.chrysosporium might serve as a sound basis for the<br />

further exploitation <strong>of</strong> these species as fungal inoculants in biological remediation<br />

processes.<br />

Keywords: Pesticides, simazine, trifluralin, dieldrin, Tremetes versicolor and<br />

Phanerochaete chrysosporium<br />

are expensive and rather inefficient (Nerud et al., 2003<br />

and Schoefs et al., 2004) because the contaminated<br />

soil has to be excavated at a site and moved to a storage<br />

area where it can be processed. Due to environmental<br />

concerns associated with the accumulation <strong>of</strong> pesticides<br />

in food products and water supplies there is a great<br />

need to develop safe, convenient and economically<br />

feasible methods for pesticide remediation (Zhang and<br />

Chiao, 2002). For this reason several biological<br />

techniques involving biodegradation <strong>of</strong> organic<br />

compounds by micro- organisms have been developed<br />

(Schoefs et al., 2004).<br />

Page 35


<strong>International</strong> <strong>Journal</strong> <strong>of</strong> <strong>Advanced</strong> <strong>Life</strong> <strong>Sciences</strong> (IJALS)<br />

Int. j. Adv. Lif. Sci., Available online on at www.<br />

Int. J. Adv. Lif. Sci., Available online on at www. ijals.com<br />

ISSN<br />

2277 – 758X<br />

Umamaheswari et al., IJALS, Vol.3. May - 2012. RESEARCH ARTICLE<br />

The use <strong>of</strong> microorganisms (fungi or bacteria),<br />

either naturally occurring or introduced, to degrade<br />

pollutants is called bioremediation (Pointing, 2001).<br />

Microbial metabolism is probably the most important<br />

pesticide degradation process in soils (Kearney and<br />

Wauchope, 1998) and is the basis for bioremediation,<br />

as the degrading microorganisms obtain carbon,<br />

nitrogen or energy from the pesticide molecules (Gan<br />

and Koskinen, 1998). The goal <strong>of</strong> bioremediation is to<br />

at least reduce pollutant levels to undetectable, nontoxic<br />

or acceptable levels, i.e. within limits set by regulatory<br />

agencies (Pointing, 2001) or ideally completely mineralize<br />

organ is pollutants to carbon dioxide. From an<br />

environmental point <strong>of</strong> view this total mineralization is<br />

desirable as it represents complete detoxification (Gan<br />

and Koskinen, 1998). The use <strong>of</strong> bioremediation to<br />

remove pollutants is typically less expensive than the<br />

equivalent physico-chemical methods. This technology<br />

<strong>of</strong>fers the potential to treat contaminated soil and<br />

groundwater on site without the need for excavation<br />

(Balba et al., 1998), it requires little energy input and<br />

preserves the soil structure (Hohener et al., 1998).<br />

Perhaps the most attractive feature <strong>of</strong> bioremediation is<br />

the reduced impact on the natural ecosystems, which<br />

should be more acceptable to the public.<br />

Application <strong>of</strong> fungal technology for the<br />

cleanup <strong>of</strong> contaminants has shown promise since 1985<br />

when the white rot species Phanerochaete chrysosporium<br />

was found to be able to metabolize a number <strong>of</strong><br />

important environmental pollutants. This ability is<br />

generally attributed to the lignin degrading enzymatic<br />

system <strong>of</strong> the fungus and a similar degrading capacity<br />

was later described for other white rot fungal species<br />

(Sasek, 2003). An environmental factor that may well<br />

have a crucial effect on bioremediation is soil water<br />

availability, as it varies naturally throughout the<br />

year. Nevertheless, very few studies look at the effects<br />

<strong>of</strong> water availability on bioremediation. This study was<br />

aimed to isolate the fungi from pesticide-contaminated<br />

soil and to determine pesticide degradation rates in soil<br />

extract liquid broth after the incubation with fungal<br />

inoculation.<br />

Materials and Methods<br />

Collection <strong>of</strong> soil samples<br />

For this present study the soil samples were<br />

collected from agricultural field <strong>of</strong> Kurichi village,<br />

Pattukkottai taluk, Thanjavur District, Tamilnadu,<br />

India. The soil samples were collected from the study<br />

site at a depth within 15 cm from the surface <strong>of</strong> the soil<br />

at random during the study period. The collected soil<br />

samples were brought to the laboratory in sterilized<br />

polythene bags, handpicked, air dried and stored in<br />

containers for future use.<br />

Isolation <strong>of</strong> fungi<br />

One gram <strong>of</strong> the soil sample was suspended in<br />

100 ml <strong>of</strong> sterilized Minimal media, without sample<br />

considered as control. Both were incubated at 37 0 C for<br />

24 to 48 hrs. 0.1 ml <strong>of</strong> inoculum was transferred to<br />

petriplate having PDA medium by spread plate<br />

technique. Population <strong>of</strong> fungi was isolated from the<br />

soil samples by serial dilution technique. Fungi were<br />

identified by using standard manuals, viz Mannual <strong>of</strong><br />

Soil Fungi (Gillman, 1947), Dematiaceous Hyphomycetes<br />

(Ellis, 1971).<br />

Physico-chemical properties <strong>of</strong> the soil<br />

Shallow, duplicate soil cores were collected<br />

from the study site with a piston corer (54.3 cm 3 , 12 cm<br />

long x 1.2 cm radius) and stored in watertight plastic<br />

bags until analysis <strong>of</strong> pH, nutrients and organic content.<br />

The soil sample was air dried and powdered to pass<br />

through a sieve (2 mm). They were collected in a plastic<br />

container, sealed and stored at 4°C for further use.<br />

Page 36


<strong>International</strong> <strong>Journal</strong> <strong>of</strong> <strong>Advanced</strong> <strong>Life</strong> <strong>Sciences</strong> (IJALS)<br />

Int. j. Adv. Lif. Sci., Available online on at www.<br />

Int. J. Adv. Lif. Sci., Available online on at www. ijals.com<br />

ISSN<br />

2277 – 758X<br />

Umamaheswari et al., IJALS, Vol.3. May - 2012. RESEARCH ARTICLE<br />

Determination <strong>of</strong> pH was done by a digital<br />

pH meter, electrical conductivity by a conductivity<br />

meter (Elico). The moisture content was determined<br />

after drying at 105°C for 24 hrs. Organic matter and<br />

organic carbon was determined titrimetrically (Walkley<br />

and Black, 1934) and expressed as percentage (%). The<br />

phosphorus content was estimated by Olsen et al.,<br />

(1954). The nitrogen and potassium was estimated<br />

according to the method <strong>of</strong> Sankaram (1966).<br />

Micronutrients viz Zinc, Copper, Manganese and Iron<br />

were estimated by Lindsay and Norwell (1978).<br />

Inoculation with fungi, sampling and dry weight<br />

determination<br />

A soil extract liquid broth was used in this<br />

study. 100 ml <strong>of</strong> soil extract was taken in Erlenmeyer<br />

flasks (250 ml) to which four plugs <strong>of</strong> actively growing<br />

mycelium <strong>of</strong> Tremetes versicolor and Phanerochaete<br />

chrysosporium were inoculated in each flask. It was<br />

maintained at 27±1 o C, for 25 days with constant<br />

agitation at 150 rpm. After the incubation period the<br />

mycelium was filtered through whatman No. 1 filter<br />

paper and biomass determined by drying the mycelium<br />

for 48 hours at 80 o C. The fresh filtrate was frozen at<br />

20 o C and used later for pesticide quantification<br />

determination.<br />

Pesticide analysis<br />

The HPLC was used to determine the amount<br />

<strong>of</strong> simazine, trifluralin and dieldrin (Eliassy, 1997).<br />

Results<br />

The present study was undertaken to assess the<br />

distribution and occurrence <strong>of</strong> fungi from pesticides<br />

polluted soil, which were collected from agricultural<br />

field <strong>of</strong> Kurichi village, Pattukkottai, Thanjavur<br />

District, Tamilnadu, India. Totally 8 species <strong>of</strong> fungi<br />

belongs to 5 genus were isolated from the soil samples.<br />

Among them the genus Aspergillus was recorded with<br />

3 species viz., A. niger, A. terreus, and A. flavus followed<br />

by Tremetes with 2 species viz., T. socotrana and<br />

T.versicolor. The genus Phenerocheate, Cladosporium and<br />

Fusarium were recorded with single species each<br />

(Table - 1).<br />

The physico-chemical characteristics <strong>of</strong> soil<br />

samples <strong>of</strong> the study sites were given in the Table 2.<br />

The texture and colour <strong>of</strong> the soil was sandy and brown<br />

respectively in the soil samples. The pH and electrical<br />

conductivity values were reported viz., 7.8 and 0.32<br />

respectively in the soil samples. The percentage <strong>of</strong><br />

organic matter was 0.56%. The macronutrients content<br />

in the study site were given in the Table - 2.<br />

The impact <strong>of</strong> the two fungal inoculants such<br />

as T. versicolor and P. chrysosporium on degradation<br />

<strong>of</strong> pesticides were observed and recorded for soil<br />

sample. Initially 3 different types <strong>of</strong> pesticides such<br />

as Simazine (5.1ppm), Trifluralin (3.34 ppm) and<br />

Dieldrin (1.76 ppm) were observed through HPLC.<br />

These pesticides were reduced in their level after the<br />

treatment <strong>of</strong> fungal isolates. Among the pesticides<br />

content the Simazine was reduced the maximum levels<br />

when compared to Trifluralin and Dieldrin. The fungi<br />

P. chrysosporium removed maximum amount <strong>of</strong> all<br />

pesticides than the T. versicolor in the present soil<br />

sample analysis (Table - 3).<br />

Discussion<br />

Successful bioremediation is dependent on an<br />

interdisciplinary approach involving such disciplines as<br />

microbiology, engineering, ecology, geology and<br />

chemistry (Boopathy, 2000). To evaluate the outcome<br />

<strong>of</strong> bioremediation it is critical to assess some<br />

microbiological and biochemical parameters all giving<br />

information on soil quality. It is difficult to choose<br />

which parameters are more reliable, as the relationship<br />

Page 37


<strong>International</strong> <strong>Journal</strong> <strong>of</strong> <strong>Advanced</strong> <strong>Life</strong> <strong>Sciences</strong> (IJALS)<br />

Int. j. Adv. Lif. Sci., Available online on at www.<br />

Int. J. Adv. Lif. Sci., Available online on at www. ijals.com<br />

ISSN<br />

2277 – 758X<br />

Umamaheswari et al., IJALS, Vol.3. May - 2012. RESEARCH ARTICLE<br />

between an individual biochemical property and the<br />

totalmicrobial activity is not always clear, in complex<br />

systems like soils where the microorganisms and<br />

processes involved in the degradation <strong>of</strong> organic<br />

compounds are highly diverse (Nannipieri et al., 1990).<br />

White rot fungi possess a number <strong>of</strong> advantages<br />

that can be exploited in bioremediation systems. Because<br />

key components <strong>of</strong> their lignin-degrading system are<br />

extracellular, these fungi can degrade insoluble<br />

chemicals such as lignin or an extremely diverse range<br />

<strong>of</strong> very persistent or toxic environmental pollutants<br />

(Barr and Aust, 1994). The mycelial growth habit is<br />

also advantageous as it allows rapid colonization <strong>of</strong><br />

substrates, and hyphal extension enables penetration <strong>of</strong><br />

soil reaching pollutants in ways that other organisms<br />

cannot do (Reddy and Mathew, 2001). This can<br />

maximise physical, mechanical and enzymatic contact<br />

with the surrounding environment (Maloney, 2001). In<br />

addition, these fungi use inexpensive and abundant<br />

lignocellulosic materials as a nutrient source. They can<br />

tolerate a wide range <strong>of</strong> environmental conditions, such<br />

as temperature, pH and moisture and do not require pre-<br />

conditioning to a particular pollutant, because their<br />

degradative system is induced by nutrient deprivation<br />

(Barr and Aust, 1994).<br />

In a more recent study by biological<br />

degradation <strong>of</strong> benzene and toluene by T.versicolor was<br />

analyzed and the biomass were determined by Demir<br />

(2004). Within an incubation period <strong>of</strong> 48 hrs, it was<br />

observed that, removal was completed after 4 hours<br />

when initial toluene concentration was 50 mg/l and was<br />

completed in 36 hrs when this was 300 mg/l.<br />

Biodegradation was completed by the end <strong>of</strong> the 4th hr<br />

at benzene concentrations <strong>of</strong> 50mgl -1 while it continued<br />

for 42 hrs at 300 mgl -1 . With the addition <strong>of</strong> veratryl<br />

alcohol, laccase inducers, to the basic feed medium, the<br />

operation <strong>of</strong> the enzyme system was enhanced and<br />

biodegradation completed in a shorter time period.<br />

Table - 1. Fungal flora in the soil sample<br />

Sl. No<br />

Name <strong>of</strong> the organism<br />

1 Aspergillus niger<br />

2 A. terreus<br />

3 A. flavus<br />

4 Phenerochete chrysosporium<br />

5 Tremetes socotrana<br />

6 T.versicolor<br />

7 Fusarium sp<br />

8 Cladosporium sp<br />

Table - 2. Physico-chemical characteristics <strong>of</strong> soil<br />

sample<br />

Sl.No Parameters Values<br />

1. Soils texture Sandy<br />

2. Colour Brown<br />

3. pH 7.8<br />

4. Ecdcm -1 0.32<br />

5. Organic carbon % 0. 56%<br />

6. Nitrogen (mg/g) 91.2<br />

7. Potassium (mg/g) 78.1<br />

8. Phosphorus (mg/g) 9.5<br />

9. Zinc (ppm) 0.93<br />

10. Copper (ppm) 0.36<br />

11. Iron (ppm) 3.23<br />

12. Manganese (ppm) 8.83<br />

The microbial population <strong>of</strong> a site<br />

contaminated with pesticides may be eliminated,<br />

significantly reduced or altered; but alternatively,<br />

microbes may adapt to the presence <strong>of</strong> toxic<br />

compounds and can survive by degrading them as some<br />

microorganisms can utilize pesticides as a nutrient<br />

source. As soil microorganisms are not equal resistant<br />

to xenobiotics, some <strong>of</strong> them are very sensitive and do<br />

Page 38


<strong>International</strong> <strong>Journal</strong> <strong>of</strong> <strong>Advanced</strong> <strong>Life</strong> <strong>Sciences</strong> (IJALS)<br />

Int. j. Adv. Lif. Sci., Available online on at www.<br />

Int. J. Adv. Lif. Sci., Available online on at www. ijals.com<br />

ISSN<br />

2277 – 758X<br />

Umamaheswari et al., IJALS, Vol.3. May - 2012. RESEARCH ARTICLE<br />

Table - 3. Analysis Pesticide level in soil extract by HPLC<br />

not grow when toxic compounds are present in high<br />

concentrations or constitute a low carbon and energy<br />

source, while other are able to adapt and grow well<br />

(Guirard et al., 2003). Han et al. (2004) studied the<br />

degradation <strong>of</strong> phenanthrene by T.versicolor and its<br />

laccase was purified. After 36 hrs incubation, about<br />

46 and 65% <strong>of</strong> 100mgl -1 <strong>of</strong> phenanthrene added in<br />

shaken and static fungal cultures were removed,<br />

respectively. Although the removal percentage was<br />

highest (76.7%) at 10mgl -1 <strong>of</strong> phenanthrene, the trans-<br />

formation rate was maximal (0.82mgh -1 ) at 100mgl -1 <strong>of</strong><br />

phenanthrene in the fungal culture. When the purified<br />

laccase <strong>of</strong> T. versicolor reacted with phenanthrene, the<br />

compound was not transformed. Another interesting<br />

example <strong>of</strong> contaminant degradation and enzyme activity<br />

was in the study described by Barr and Aust (1994).<br />

They described cyanide to be quite toxic to spores <strong>of</strong><br />

P.chrysosporium (50% inhibition <strong>of</strong> glucose metabolism<br />

at 2.6mgl -1 ).<br />

Min et al. (2001) reported that increasing<br />

concentrations <strong>of</strong> butachlor in soil enhanced the activity<br />

<strong>of</strong> dehydrogenase with the highest activity on the<br />

16 th day after application <strong>of</strong> 22mg/kg soil <strong>of</strong> but achlor.<br />

Baran et al. (2004) reported high dehydrogenase<br />

activity in soil contaminated with PAH. Felsot and<br />

Dzantor (1995) described the effect <strong>of</strong> alachlor and<br />

organic amendment on soil dehydrogenase activity<br />

and on pesticide degradation rates. Amendment <strong>of</strong> soil<br />

Control<br />

(ppm)<br />

with corn meal caused fasterdegradation <strong>of</strong> alachlor.<br />

At very high concentrations <strong>of</strong> alachlor (750mg/kg soil)<br />

dehydrogenase activities in amended soils surpassed<br />

levels in corresponding nopesticide controls after<br />

21days with coincident alachlor degradation >50%<br />

during the same period. They suggested that stimulation<br />

<strong>of</strong> microbial activity by addition <strong>of</strong> organic amendments<br />

might enhance co-metabolism <strong>of</strong> high concentrations <strong>of</strong><br />

pesticides in soil. Totally three different pesticide such<br />

as simazine, trifluralin and dieldrin was recorded in soil<br />

extract through HPLC. Among the pesticide simazine<br />

was recorded maximum than trifluralin and dieldrin.<br />

The results obtained in this study provide valuable<br />

knowledge on the abilities <strong>of</strong> T.versicolor and<br />

P. chrysosporium might serve as a sound basis for the<br />

further exploitation <strong>of</strong> these species as fungal<br />

inoculants in biological remediation processes.<br />

References<br />

Balba, M., Al-Awadhi, N. and Al-Daher, R. 1998.<br />

Bioremediation <strong>of</strong> oil-contaminated soil: micro-<br />

biological methods for feasibility assessment and<br />

field evaluation. J. Microbiological Methods., 32 :<br />

155 - 164.<br />

Treated<br />

P.chrysosporium<br />

S. No Pesticide Initial (ppm)<br />

T.versicolor<br />

(ppm)<br />

(ppm)<br />

1. Simazine 5.1 5.1 2.48 2.96<br />

2. Trifluralin 3.34 3.31 2.63 2.77<br />

3. Dieldrin 1.76 1.73 0.98 1.21<br />

Baran, S., Bielinska, J. and Oleszuk, P. 2004. Enzymatic<br />

activity in an airfield soil polluted with polycyclic<br />

aromatic hydrocarbons. Geoderma, 110: 221-232.<br />

Page 39


<strong>International</strong> <strong>Journal</strong> <strong>of</strong> <strong>Advanced</strong> <strong>Life</strong> <strong>Sciences</strong> (IJALS)<br />

Int. j. Adv. Lif. Sci., Available online on at www.<br />

Int. J. Adv. Lif. Sci., Available online on at www. ijals.com<br />

ISSN<br />

2277 – 758X<br />

Umamaheswari et al., IJALS, Vol.3. May - 2012. RESEARCH ARTICLE<br />

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<strong>of</strong> recalcitrant compounds. In Sasek V. et al. (Eds.)<br />

the utilization <strong>of</strong> bioremediation to reduce soil<br />

contamination: Problems and solutions, pp. 29-48.<br />

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Corresponding Author : V. Ramamurthy, Post Graduate and Research Department <strong>of</strong> Biochemistry,<br />

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