The Emerging Limbs and Twigs of the East Asian mtDNA Tree

Table 1
Continued
c) Coding Region Sequence and RFLP Variation c
Limbs and Twigs of East Asian mtDNA Tree 1741
1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
8 8 8 8 8 8 9 9 9 0 0 0 0 0 0 0 0 1 2 2 2 2 3 4 5 5 5 5
9 1 2 3 4 7 9 0 5 8 3 3 3 3 3 4 6 8 4 3 3 4 7 2 9 0 0 0 2
b 4 4 9 1 0 9 5 4 2 7 9 9 9 9 0 4 7 6 5 7 0 0 5 5 4 7 9 3
Haplo- p 8 9 1 4 1 4 2 0 0 3 4 7 7 8 0 6 1 5 8 2 6 5 9 3 3 9 4 5
Sample group e b e x n r g c a z u o w o i
25................... D4 2 � � � � � A G T �
26................... D4 2 � � � � � A G T �
27................... D4 2 � � � � � A G T �
28................... D5 2 � � � G � � G G T �
29................... D5 2 � � � G G T � �
30................... D5 2 � � � � � G G T �
31................... D5 2 � � � � � G G T �
32................... E 2 � � � � � A G T � �
33................... F 2 � � � �
34................... F1a 2 � � � � � �
35................... F1a 2 � � � � � �
36................... F1a 2 � � � �
37................... F1a 2 � � � � �
38................... F1a 2 � � � �
39................... F1a 2 � � � � �
40................... F1a 2 � � � �
41................... F1a 2 � � � �
42................... F1a 2 � � � � � �
43................... F1a 2 � � � �
44................... F1a 2 � � � � � �
45................... F1a 2 � � � �
46................... F1b 2 � � � � � � �
47................... F1c 2 � � � � � �
48................... F2 2 � � � � � �
49................... F2 2 � � � � � � �
50................... F2a 2 � � � � � �
51................... G2 2 � � � � � A G T �
52................... M 2 � � � � � � A G T �
53................... M 2 � � � � � � A G T �
54................... M 2 � � � � � � A G T �
55................... M7 2 � � � � � � A G T � �
56................... M7b 2 � � � � A G T
57................... M7b 2 � � � � � � A G T
58................... M7b 2 � � � � � � A G T
59................... M7b 2 � � � � � � A G T
60................... M7b1 2 � � � � � � A G T �
61................... M7b1 2 � � � � � � A G T
62................... M7c 2 � G G � � � � � A G T
63................... M8a 2 � � � � � � A G T
64................... M8a 2 � � � � � � A G T
65................... N 2 � A G � � � � A A C � � � C G A C
66................... N9a 2 � A G � � G � � A A C � G A � C G G T
67................... R 2 � � � � � � �
68................... R9a 2 � � � � � �
69................... W 2 � A A � � A � � A A C � � � T G A C
..................... A4 � A G � � � � A G � C G A C
..................... Y � � A G � � � � A G � C G A C
..................... W � A A � � � � A G � C G A C
..................... N1a � A G � � � � A G �
..................... N �� A G � � � � A G �
a Two hypervariable segments of the control region were sequenced: HVS-I (16024–16383) and HVS-II (16511–00360). Nucleotide change is specified for
transversions; d � deletion; ��insertion. Length variation in the C stretch (16184–16193) is not shown. Mutations that were detected outside the specified range
are shown in parentheses.
b Revised Cambridge reference sequence (Andrews et al. 1999).
c Restriction-endonuclease sites are indicated as follows: a � AluI, b � AvaII, c � DdeI, e � HaeIII, f � HhaI, g � HinfI, i � MspI, j � MboI, k � RsaI;
n � HaeII, o � HincII, r � BfaI, u � MseI, w � MboII, x � SspI, y � HphI, z � MnlI. Haplogroup assignments are according to Figure 2.
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