Users Guide - Facultad de Ciencias

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48 Trouble ShootingClick killtopspin.Normally, this kill all TOPSPIN processes including cpr, cprserver, dataserver andjava.INDEXDONE INDEX3.5 How to Restart User Interface during AcquisitionIf Topspin hangs up during a data acquisition, you can restart the user interfacewithout disturbing the acquisition. To do that:1. Open the file:/prog/curdir//historywhere is the TOPSPIN home directory and is the user whostarted TOPSPIN. Look for the term ’Java Virtual Machine’ and check its PID.2. Open the Task Manager (Windows) or System Monitor (Linux)3. Stop the Java(w).exe process with the PID found in the history file.4. Open a Windows Command Prompt or Linux Shell5. Go to the TOPSPIN Installation directory6. Enter topspin -client
Chapter 4Dataset Handling4.1 The Topspin Browser and PortfolioTOPSPIN offers a data browser/portfolio from which you can browse, select, andopen data. Furthermore it allows you to <strong>de</strong>fine and list alias names for data. Thebrowser appears at the left of the TOPSPIN window and can be controlled from theView menu.The browser is similar to the Windows Explorer. It shows data directory trees andallows you to expand/collapse their elements. Figure 4.1 shows a TOPSPIN browserwith one top level data directory and one dataset fully expan<strong>de</strong>d.
Page 1 and 2: TOPSPINUsers GuideCopyright (C) 200
Page 3 and 4: Chapter 1 Getting Started . . . . .
Page 5 and 6: How to Automatically Select the fir
Page 7 and 8: How to Display the FID . . . . . .
Page 9 and 10: How to Move the Integral Trails Up/
Page 11 and 12: INDEXINDEX DONEHow to Read a Window
Page 13 and 14: How to Change the Font of the Statu
Page 15 and 16: Chapter 1Getting Started1.1 Documen
Page 17 and 18: Getting Started 17Available Documen
Page 19 and 20: Getting Started 19you to install pu
Page 21 and 22: Getting Started 212. Right-click an
Page 23 and 24: Getting Started 23Any Fid or a spec
Page 25 and 26: Getting Started 25task mathematical
Page 27 and 28: Chapter 2The TOPSPIN Interface2.1 T
Page 29 and 30: The TOPSPIN Interface 29• can be
Page 31 and 32: The TOPSPIN Interface 31Switch to p
Page 33 and 34: The TOPSPIN Interface 33Buttons for
Page 35 and 36: The TOPSPIN Interface 35INDEXINDEXD
Page 37 and 38: The TOPSPIN Interface 37Focus in th
Page 39 and 40: The TOPSPIN Interface 392.6 Help in
Page 41 and 42: The TOPSPIN Interface 412.7 User De
Page 43 and 44: Chapter 3Trouble Shooting3.1 Genera
Page 45 and 46: Trouble Shooting 45window:INDEXINDE
Page 47: Trouble Shooting 473.3 How to Show
Page 51 and 52: Dataset Handling 51entry to define,
Page 53 and 54: Dataset Handling 53Note that collap
Page 55 and 56: Dataset Handling 552. Choose Sort m
Page 57 and 58: Dataset Handling 573. Click the dow
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Page 63 and 64: Dataset Handling 633. In the appear
Page 65 and 66: Dataset Handling 652. Specify a pro
Page 67 and 68: Dataset Handling 671. Click File "
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Page 71 and 72: Dataset Handling 71To select multip
Page 75 and 76: Dataset Handling 75! Right-click in
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Page 80 and 81: 80 Parameter Handlingfor 2D data, t
Page 82 and 83: 82 Parameter Handlings mc2Note that
Page 84 and 85: 84 Parameter Handling! Use the scro
Page 87 and 88: Chapter 6Data Processing6.1 Interac
Page 89 and 90: Data Processing 89INDEXINDEXDONEFig
Page 91 and 92: Data Processing 91program, just ent
Page 93 and 94: Data Processing 93Browse for existi
Page 95 and 96: Chapter 7Printing/Exporting Data7.1
Page 97 and 98: Printing/Exporting Data 97Use plot
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Printing/Exporting Data 997.2 Expor
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102 1D Displaydatafieldtitle barTab
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104 1D Display8.3 Changing the Disp
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106 1D Displayor! Click one of the
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108 1D DisplayStatus parameter disp
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110 1D DisplayThis allows you to ed
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112 1D Display• Export...Export s
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114 1D DisplayINDEXDONEINDEXFigure
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116 1D DisplayRange (F1) to : the r
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118 1D Display2. Right-click any in
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120 1D Display• Expand allExpand
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122 1D DisplayRemove the selected i
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124 1D DisplayHow to Display the FI
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126 1D Display8.6 Show Display Prop
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128 1D DisplayHow to Display the Ma
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130 1D DisplayINDEXDONEINDEXThe con
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Chapter 92D Display9.1 The 2D Data
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2D Display 135orIncrease/decrease t
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2D Display 137b) Click OKRetrieve p
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2D Display 139INDEXINDEXDONEHere yo
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2D Display 141INDEXINDEXDONEHow to
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2D Display 143INDEXINDEXDONEThis di
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2D Display 145With the spectrum ove
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2D Display 147INDEXINDEXDONEFigure
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2D Display 149How to Set the 2D Con
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2D Display 151pressing Alt+PageUp:!
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2D Display 153:INDEXINDEXDONEFigure
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156 3D DisplayINDEXDONEINDEXFigure
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158 3D DisplayINDEXDONEINDEXHow to
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160 3D Displaytab will display the
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162 1D Interactive Manipulation11.1
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164 1D Interactive ManipulationIncr
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166 1D Interactive ManipulationHow
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168 1D Interactive ManipulationINDE
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170 1D Interactive Manipulation3. E
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es172 1D Interactive ManipulationHo
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176 1D Interactive Manipulationdow.
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178 1D Interactive ManipulationThe
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184 1D Interactive ManipulationPerf
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Chapter 122D Interactive Manipulati
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2D Interactive Manipulation 195INDE
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2D Interactive Manipulation 197Note
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2D Interactive Manipulation 199unti
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2D Interactive Manipulation 201nucl
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2D Interactive Manipulation 203How
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2D Interactive Manipulation 205Fig.
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2D Interactive Manipulation 207INDE
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2D Interactive Manipulation 209! cl
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Chapter 13Data Window Handling13.1
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.Data Window Handling 213INDEXINDEX
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Data Window Handling 215INDEXINDEXD
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Data Window Handling 217or! Click W
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Data Window Handling 219• Each cu
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222 Analysis14.2 1D Signal to Noise
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224 Analysis3. Enter new limit valu
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226 AnalysisINDEXDONEINDEXFigure 14
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228 Analysisboxes:• All for all q
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230 Analysisor! Click the radio but
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232 Analysis2. Click Saveto save al
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234 AnalysisCQ(Quad) - Quadrupolar
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ES238 AnalysisINDEXDONEINDEXFigure
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240 Analysis• Click the Setup but
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242 Analysistoolbar. Fig. 14.11 sho
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244 Analysispeak picking is require
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246 Analysis1. Click the button (it
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248 AnalysisSelect the previous lev
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252 Analysisshown in Fig. 14.18.IND
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Chapter 15AcquisitionThis chapter d
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Acquisition 257required parameters.
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Acquisition 259Set SFO1, O1, O2 and
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Acquisition 261INDEXINDEXDONEFigure
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Acquisition 26315.5 LockingThe lock
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Acquisition 269The dataset will app
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Acquisition 271opens two extra butt
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Acquisition 275where you can enter
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Acquisition 277INDEXINDEXDONEHere,
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Acquisition 281How to Calculate the
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Acquisition 283and hard pulse. The
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Acquisition 285• is set to the fi
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Acquisition 287A minimum of two sha
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Acquisition 289and selected a phase
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Acquisition 293to 90° and the Type
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Acquisition 295• Enter Total Rota
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Acquisition 29714.Click OKINDEXINDE
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300 Configuration/AutomationHow to
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302 Configuration/Automationnow. Wa
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304 Configuration/AutomationHow to
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Chapter 17Remote Control17.1 Remote
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Remote Control 309INDEXINDEXDONEFig
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Remote Control 311network traffic.
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314 User Preferences(see Fig. 18.1)
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316 User PreferencesWindows 2000, t
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318 User Preferences3. Click the Ch
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320 User Preferences• The value a
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322 User Preferences1. Click Option
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324 User Preferencesfrom the appear
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326 User Preferences3. Set the Stat
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Chapter 19User ExtensionsTOPSPIN of
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User Extensions 331int first, max;c
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User Extensions 333of the users pro
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User Extensions 335Add User-Defined
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User Extensions 337INDEXINDEXDONEFi
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User Extensions 339user properties
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IndexSymbols*2 command 31, 37, 104,
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I-3font 321in multiple display mode
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I-5user 19, 50, 56variables 68datas
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I-7extend the Topspin functionality
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I-9baseline points 186Bruker AU pro
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I-11mode 1D 188ranges in 1D 189peak
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I-13color scheme 318cubic spline ba
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I-15peak labels 127spectra 21title
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