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marker-assisted selection in wheat

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20Marker-<strong>assisted</strong> <strong>selection</strong> – Current status and future perspectives <strong>in</strong> crops, livestock, forestry and fishresearch was reported for citrus, mango,p<strong>in</strong>eapple and many other fruit trees largelycultivated <strong>in</strong> develop<strong>in</strong>g countries. Severalresearch <strong>in</strong>itiatives are apply<strong>in</strong>g molecular<strong>marker</strong>s to <strong>in</strong>dustrial crop species, such assugar cane, cotton, rubber, jute, coffee, flaxand oil palm.FAO plant breed<strong>in</strong>g and relatedbiotechnology capacityassessmentIn 2002, a draft questionnaire was designedto gather country <strong>in</strong>formation on resourceallocation trends <strong>in</strong> plant breed<strong>in</strong>g and biotechnologyrelated activities. Later <strong>in</strong> thesame year, a group of experts <strong>in</strong>clud<strong>in</strong>grepresentatives from CGIAR centres, thepublic and private sectors and non-governmentalorganizations (NGOs), met atFAO headquarters to discuss the natureof the <strong>in</strong>formation to be collected and theprocedure for its collection. This resulted<strong>in</strong> a questionnaire be<strong>in</strong>g developed andsent to all public and private applied plantbreed<strong>in</strong>g programmes as well as to biotechnologylaboratories <strong>in</strong> develop<strong>in</strong>g countriesand countries <strong>in</strong> transition. Among otherissues, the survey gathered <strong>in</strong>formationon the number of full-time equivalentplant breeders and biotechnologists availabledur<strong>in</strong>g each five-year period beg<strong>in</strong>n<strong>in</strong>gfrom 1985. The questionnaire also requested<strong>in</strong>formation concern<strong>in</strong>g trends of resourcesallocated to biotechnology as well as togermplasm improvement (pre-breed<strong>in</strong>g),l<strong>in</strong>e development and l<strong>in</strong>e evaluation.One of the objectives of the survey wasto assess the gap between biotechnologytools and their successful deployment <strong>in</strong>applied breed<strong>in</strong>g programmes (Guimarães,Kueneman and Carena, 2006). The surveytherefore also concentrated on priorities forbreed<strong>in</strong>g, potential <strong>in</strong>ternational support tostrengthen national breed<strong>in</strong>g programmes,the number of varieties released and thefactors that are most likely to limit thesuccess of applied plant breed<strong>in</strong>g programmes,<strong>in</strong>clud<strong>in</strong>g the current status ofbiotechnology. The work of gather<strong>in</strong>gthe <strong>in</strong>formation and prepar<strong>in</strong>g a technicalreport on the current status of nationalplant breed<strong>in</strong>g and related biotechnologywas assigned to a well-known and respectednational plant breed<strong>in</strong>g scientist. This hasbeen the key to identify<strong>in</strong>g gaps <strong>in</strong> order todevelop strategies for strengthen<strong>in</strong>g effortsdirected at the susta<strong>in</strong>able use of plantgenetic resources for food and agriculture(PGRFA) <strong>in</strong> national programmes.For the purposes of this chapter, biotechnologydata were gathered from25 countries to complement the prelim<strong>in</strong>aryassessments based on FAO-BioDeCon the use of molecular <strong>marker</strong>s <strong>in</strong> develop<strong>in</strong>gcountries (Table 5). The data gathered<strong>in</strong>dicate that tissue culture is the mostcommon biotechnology technique as it wasused <strong>in</strong> 88 percent of all cases, followedby MAS (44 percent), the double-haploidtechnique (32 percent), <strong>in</strong>terspecificcrosses (28 percent), molecular characterization(24 percent) and genetic eng<strong>in</strong>eer<strong>in</strong>g(12 percent).Applications of molecular <strong>marker</strong>s<strong>in</strong>clude a number of categories with<strong>in</strong>biotechnology such as MAS, molecularcharacterization, facilitat<strong>in</strong>g genetic eng<strong>in</strong>eer<strong>in</strong>gand track<strong>in</strong>g desirable chromosomesegments when mak<strong>in</strong>g wide crosses (e.g.<strong>in</strong>terspecific crosses). The results <strong>in</strong> Table 5suggest that molecular <strong>marker</strong>s might bean <strong>in</strong>tegral part of develop<strong>in</strong>g countryagricultural efforts. MAS seems to be thesecond most utilized biotechnology toolapplied after tissue culture, imply<strong>in</strong>g thatemphasis should be given to the developmentof molecular <strong>marker</strong>s to make <strong>selection</strong>more efficient. However, rapid and efficient

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