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marker-assisted selection in wheat

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Chapter 10 – Strategies, limitations and opportunities for <strong>marker</strong>-<strong>assisted</strong> <strong>selection</strong> <strong>in</strong> livestock 183ReferencesAndersson, L. 2001. Genetic dissection of phenotypic diversity <strong>in</strong> farm animals. Nature Revs. Genet.2: 130–138.Chaiwong, N., Dekkers, J.C.M., Fernando, R.L. & Rothschild, M.F. 2002. Introgress<strong>in</strong>g multipleQTL <strong>in</strong> backcross breed<strong>in</strong>g programs of limited size. Proc. 7 th Wld. Congr. Genet. Appl. Livest.Prodn. Electronic Communication No. 22: 08. Montpellier, France.Darvasi, A. & Soller, M. 1995. Advanced <strong>in</strong>tercross l<strong>in</strong>es: an experimental population for f<strong>in</strong>e geneticmapp<strong>in</strong>g. Genetics 141: 1199–1207.Dekkers, J.C.M. & van Arendonk, J.A.M. 1998. Optimiz<strong>in</strong>g <strong>selection</strong> for quantitative traits with<strong>in</strong>formation on an identified locus <strong>in</strong> outbred populations, Genet. Res. 71: 257–275.Dekkers, J.C.M. 2004. Commercial application of <strong>marker</strong>- and gene-<strong>assisted</strong> <strong>selection</strong> <strong>in</strong> livestock:strategies and lessons. J. Anim. Sci. 82: E313–E328.Dekkers J.C.M. & Chakraborty, R. 2001. Potential ga<strong>in</strong> from optimiz<strong>in</strong>g multi-generation <strong>selection</strong>on an identified quantitative trait locus. J. Anim. Sci. 79: 2975–2990.Dom<strong>in</strong>ik, S., Henshall, J., O’Grady, J. & Marshall, K.J. 2007. Factors <strong>in</strong>fluenc<strong>in</strong>g the efficiency of a<strong>marker</strong> <strong>assisted</strong> <strong>in</strong>trogression program <strong>in</strong> mer<strong>in</strong>o sheep. Genet. Sel. Evol. In press.Farnir, F., Coppieters, W., Arranz, J.-J., Berzi, P., Cambisano, N., Grisart, B., Karim, L., Marcq,F., Moreau, L., Mni, M., Nezer, C., Simon, P., Vanmanshoven, P., Wagenaar, D. & Georges, M.2000. Extensive genome-wide l<strong>in</strong>kage disequilibrium <strong>in</strong> cattle. Genome Res. 10: 220–227.Fernando, R.L. 2004. Incorporat<strong>in</strong>g molecular <strong>marker</strong>s <strong>in</strong>to genetic evaluation. Session G6.1. Proc.55th Meet<strong>in</strong>g of the European Association of Animal Production. 5–9 September 2004, Bled,Slovenia.Fernando, R.L. & Grossman, M. 1989. Marker-<strong>assisted</strong> <strong>selection</strong> us<strong>in</strong>g best l<strong>in</strong>ear unbiased prediction.Genet. Sel. Evol. 21: 467–477.Gibson, J.P. 1994. Short-term ga<strong>in</strong> at the expense of long-term response with <strong>selection</strong> of identifiedloci, Proc. 5 th Wld. Cong. Genet. Appl. Livest. Prodn. CD-ROM Communication No. 21: 201–204.University of Guelph, Canada.Goddard, M.E. & Meuwissen, T.H.E. 2005. The use of l<strong>in</strong>kage disequilibrium to map quantitativetrait loci. Austr. J. Exp. Agric. 45: 837–845.Heifetz, E.M., Fulton, J. E., O’Sullivan, N., Zhao, H., Dekkers, J.C.M. & Soller, M. 2005. Extentand consistency across generations of l<strong>in</strong>kage disequilibrium <strong>in</strong> commercial layer chicken breed<strong>in</strong>gpopulations. Genetics 171: 1173–1181.Hospital, F. & Charcosset, A. 1997. Marker-<strong>assisted</strong> <strong>in</strong>trogression of quantitative trait loci. Genetics147: 1469–1485.International Chicken Polymorphism Map Consortium. 2004. A genetic variation map for chickenwith 2.8 million s<strong>in</strong>gle nucleotide polymorphisms. Nature 432: 717–722.K<strong>in</strong>ghorn, B.P. 1999. Use of segregation analysis to reduce genotyp<strong>in</strong>g costs. J. Anim. Breed. Genet.116: 175–180.K<strong>in</strong>ghorn, B.P., Meszaros, S.A. & Vagg, R.D. 2002. Dynamic tactical decision systems foranimal breed<strong>in</strong>g, Proc. 7 th Wld. Congr. Genet. Appl. Livest. Prodn. Communication No. 23-07.Montpellier, France.Koudandé, O.D., Iraqi, F., Thomson, P.C., Teale, A.J. & van Arendonk, J.A.M. 2000. Strategiesto optimize <strong>marker</strong>-<strong>assisted</strong> <strong>in</strong>trogression of multiple unl<strong>in</strong>ked QTL. Mammal. Genome 11:145–150.

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