marker-assisted selection in wheat

More documents

Recommendations

Info

Chapter 8 – Marker-assisted selection in maize 147Knight, J. 2003. Crop improvement: a dying breed. Nature 421: 568–570.Lande, R. & Thompson, R. 1990. Efficiency of marker-assisted selection in the improvement ofquantitative traits. Genetics 124: 743–756.Lander, E.S. & Botstein, D. 1989. Mapping Mendelian factors underlying quantitative traits usingRFLP linkage maps. Genetics 121: 185–199.Laurie, C.C., Chasalow, S.D., LeDeaux, J.R., McCarroll, R., Bush, D., Hauge, B., Lai, C., Clark,D., Rocheford, T.R. &. Dudley, J.W. 2004. The genetic architecture of response to long-term artificialselection for oil concentration in the maize kernel. Genetics 168: 2141–2155.Lee, M. 1995. DNA markers in plant breeding programs. Adv. Agron. 55: 265–344.Lee, M. 2006. The phenotypic and genotypic eras of plant breeding. In K.R. Lamkey & M. Lee, eds.Plant Breeding: The Arnel R. Hallauer Internat. Symp. Ames, IA, USA, Blackwell Publishing.Lee, M., Sharopova, N., Beavis, W.D., Grant, D., Katt, M., Blair, D. & Hallauer, A.R. 2002.Expanding the genetic map of maize with the intermated B73 x Mo17 (IBM) population. PlantMol. Biol. 48: 453–461.Lindblad-Toh, K., Winchester, E., Daly, M., Wang, D., Hirschhorn, J.N., Laviolette, J.P., Ardie, K.,Reich, D.E., Robinson, E., Sklar, P., Shah, N., Thomas, D., Fan, J.B., Gingeras, T., Warrington,J., Patil, N., Hudson, T.J. & Lander, E.S. 2000. Large-scale discovery and genotyping of singlenucleotidepolymorphisms in the mouse. Nature Genet. 24: 381–386.Manly, K.F. & Olson, J.M. 1999. Overview of QTL mapping software and introduction to MapManager QT. Mamm. Genome 10: 327–334.Mazur, B.J. 1995. Commercializing the products of plant biotechnology. Trends Biotech. 13:319–323.Melchinger, A.E., Utz, H.F. & Schön, C.C. 1998. Quantitative trait locus (QTL) mapping using differenttesters and independent population samples in maize reveals low power of QTL detectionand large bias in estimates of QTL effects. Genetics 149: 383–403.Mohan, M., Nair, S., Krishna, T.G., Yano, M., Bhatia, C.R. & Sasaki, T. 1997. Genome mapping,molecular markers and marker-assisted selection in crop plants. Mol. Breed. 3: 87–103.Moreau, L., Charcosset, A. & Gallais, A. 2004. Experimental evaluation of several cycles of markerassistedselection in maize. Euphytica 137: 111–118.Moreau, L., Charcosset, A., Hospital, F. & Gallais, A. 1998. Marker-assisted selection efficiency inpopulations of finite size. Genetics 148: 1353–1365.Moreau, L., Lemarié, S., Charcosset, A. & Gallais, A. 2000. Economic efficiency of one cycle ofmarker-assisted selection. Crop Sci. 40: 329–337.Morris, M., Dreher, K., Ribaut, J-M. & Khairallah, M. 2003. Money matters (II): costs of maizeinbred line conversion schemes at CIMMYT using conventional and marker-assisted selection.Mol. Breed. 11: 235–247.Naylor, R.L., Falcon, W.P., Goodman, R.M., Jahn, M.M., Sengooba, T., Tefera, H. & Nelson, R.J.2004. Biotechnology in the developing world: a case for increased investments in orphan crops.Food Policy 29: 15–44.Niebur, W.S., Rafalski, J.A., Smith, O.S. & Cooper, M. 2004. Applications of genomics technologiesto enhance rate of genetic progress for yield of maize within a commercial breeding program.In T. Fischer, N. Turner, J. Angus, L. McIntyre, M. Robertson, A. Borrell & D. Lloyd, eds. Newdirections for a diverse planet. Proc. 4 th Internat. Crop Sci. Congr., Brisbane, Australia. (available atwww.cropscience.org.au/icsc2004).
148Marker-assisted selection – Current status and future perspectives in crops, livestock, forestry and fishOpenshaw, S. & Frascaroli, E. 1997. QTL detection and marker-assisted selection for complex traitsin maize. Proc. 52 nd Ann. Corn and Sorghum Res. Conf., pp. 44–53. Washington, DC, AmericanSeed Trade Association.Parisseaux, B. & Bernardo, R. 2004. In silico mapping of quantitative trait loci in maize. Theor. Appl.Genet. 109: 508–514.Peleman, J.D. & van der Voort, J.R. 2003. Breeding by design. Trends Plant Sci. 7: 330–334.Penner, G.A., Bush, A., Wise, R., Kim, W., Domier L., Kasha, K., Laroche, A., Scoles, G., Molner,S.J. & Fedak, G. 1993. Reproducibility of random amplified polymorphic DNA (RAPD) analysisamong laboratories. PCR Meth. Appl. 2: 341–345.Pollak, L.M. 2003. The history and success of the public-private project on germplasm enhancementof maize (GEM). Adv. Agron. 78: 45–87.Rafalski, A. 2002. Applications of single nucleotide polymorphisms in crop genetics. Curr. Opin.Plant Biol. 5: 94–100.Ragot, M. & Hoisington, D.A. 1993. Molecular markers for plant breeding: comparisons of RFLPand RAPD genotyping costs. Theor. Appl. Genet. 86: 975–984.Ragot M., Biasiolli, M., Delbut, M.F., Dell’Orco, A., Malgarini L., Thevenin, P., Vernoy, J., Vivant,J., Zimmermann, R. & Gay, G. 1995. Marker-assisted backcrossing: a practical example. In A.Bervillé & M. Tersac, eds. Les Colloques, No. 72, Techniques et utilisations des marqueurs moléculaires,pp. 45–56. Paris, France, INRA.Ragot, M., Gay, G., Muller, J-P. & Durovray, J. 2000. Efficient selection for the adaptation to theenvironment through QTL mapping and manipulation in maize. In J-M. Ribaut & D. Poland, eds.Molecular approaches for the genetic improvement of cereals for stable production in water-limitedenvironments, pp. 128–130. México, D.F., CIMMYT.Ribaut, J-M. & Betrán, J. 1999. Single large-scale marker-assisted selection (SLS-MAS). Mol. Breed.5: 531–541.Ribaut, J-M., Jiang, C. & Hoisington, D. 2002. Efficiency of a gene introgression experiment bybackcrossing. Crop Sci. 42: 557–565.Ribaut, J-M., Edmeades, G., Perotti, E. & Hoisington, D. 2000. QTL analyses, MAS results, andperspectives for drought-tolerance improvement in tropical maize. In J-M. Ribaut & D. Poland,eds. Molecular approaches for the genetic improvement of cereals for stable production in water-limitedenvironments, pp. 131–136. México, D.F., CIMMYT.Robert, V.J.M., West, M.A.L., Inai, S., Caines, A., Arntzen, L., Smith, J.K. & St-Clair, D.A. 2001.Marker-assisted introgression of blackmold resistance QTL alleles from wild Lycopersicon chesmaniito cultivated tomato (L. esculentum) and evaluation of QTL phenotypic effects. Mol. Breed. 8:217–233.Saiki, R.K., Gelfand, D.H., Stoffel, S., Scharf, S., Higuchi, R.H., Horn, G.T., Mullis, K.B. & Erlich,H.A. 1988. Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase.Science 239: 487–491.Salvi, S., Tuberosa, R., Chiapparino, E., Maccaferri, M., Veillet, S., van Beuningen, L., Isaac, P.,Edwards, K. & Phillips, R.L. 2002. Towards positional cloning of Vgt1, a QTL controlling thetransition from the vegetative to the reproductive phase in maize. Plant Mol. Biol. 48: 601–613.Sax, K. 1923. The association of size differences with seed coat pattern and pigmentation in Phaseolusvulgaris. Genetics 8: 552–560.Senior, M.L. & Heun, M. 1993. Mapping maize microsatellites and polymerase chain reaction confir-
Page 2 and 3:
MARKER-ASSISTED SELECTIONCurrent st
Page 4 and 5:
iiiContentsAcknowledgementsForeword
Page 6 and 7:
Section v - marker-assisted selecti
Page 9 and 10:
viiithe specific gene or chromosome
Page 11 and 12:
CIATCIMMYTCIPCIRADcMCMDCMVCORPOICAC
Page 13 and 14:
xiiISNARISSRITPGRFAJGIKARILDLDLLD-M
Page 16 and 17:
xvContributorsAmalia BaroneProfesso
Page 18 and 19:
xviiElcio Perpétuo GuimarãesSenio
Page 20:
xixAndrea SonninoSenior Agricultura
Page 24 and 25:
Chapter 1Marker-assisted selection
Page 26 and 27:
Chapter 1 - An overview of the issu
Page 28 and 29:
Page 30 and 31:
Page 32 and 33:
Page 34:
Page 37 and 38:
16Marker-assisted selection - Curre
Page 39 and 40:
Page 41 and 42:
Page 43 and 44:
Page 45 and 46:
Page 47 and 48:
Page 50 and 51:
Chapter 3Molecular markers for use
Page 52 and 53:
Chapter 3 - Molecular markers for u
Page 54 and 55:
Page 56 and 57:
Page 58 and 59:
Page 60 and 61:
Page 62 and 63:
Page 64 and 65:
Page 66 and 67:
Page 68 and 69:
Page 70:
Page 73 and 74:
Page 75 and 76:
Page 77 and 78:
Page 79 and 80:
Page 81 and 82:
Page 83 and 84:
Page 85 and 86:
Page 88 and 89:
Chapter 6Targeted introgression of
Page 90 and 91:
Chapter 6 - Targeted introgression
Page 92 and 93:
Page 94 and 95:
Page 96 and 97:
Page 98 and 99:
Page 100 and 101:
Page 102 and 103:
Page 104 and 105:
Chapter 7 - Marker-assisted selecti
Page 106 and 107:
Page 108 and 109:
Page 110 and 111:
Page 112 and 113:
Page 114 and 115:
Page 116 and 117:
Page 118 and 119: Chapter 7 - Marker-assisted selecti
Page 136: Chapter 7 - Marker-assisted selecti
Page 139 and 140: 118Marker-assisted selection - Curr
Page 167: 146Marker-assisted selection - Curr
Page 188 and 189: Chapter 10Strategies, limitations a
Page 190 and 191: Chapter 10 - Strategies, limitation
Page 206 and 207: Chapter 11Marker-assisted selection
Page 208 and 209: Chapter 11 - Marker-assisted select
Page 218 and 219:
Chapter 11 - Marker-assisted select
Page 220 and 221:
Page 222 and 223:
Page 224 and 225:
Page 226 and 227:
Page 228 and 229:
Page 230 and 231:
Page 232 and 233:
Page 234 and 235:
Page 236 and 237:
Page 238 and 239:
Page 240 and 241:
Page 242 and 243:
Page 244 and 245:
Page 246 and 247:
Page 248 and 249:
Page 250 and 251:
Page 252 and 253:
Page 254 and 255:
Page 256 and 257:
Page 258 and 259:
Page 260 and 261:
Page 262 and 263:
Page 264 and 265:
Page 266 and 267:
Page 268:
Page 272 and 273:
Page 274 and 275:
Page 276 and 277:
Page 278 and 279:
Page 280 and 281:
Page 282 and 283:
Page 284 and 285:
Page 286 and 287:
Page 288 and 289:
Page 290 and 291:
Page 292 and 293:
Page 294 and 295:
Page 296 and 297:
Page 298 and 299:
Page 300 and 301:
Page 302:
Page 305 and 306:
284Marker-assisted selection - Curr
Page 307 and 308:
Page 309 and 310:
Page 311 and 312:
Page 313 and 314:
Page 315 and 316:
Page 317 and 318:
Page 319 and 320:
Page 321 and 322:
Page 323 and 324:
Page 325 and 326:
Page 328:
Section VMarker-assisted selectioni
Page 331 and 332:
Page 333 and 334:
Page 335 and 336:
Page 337 and 338:
Page 339 and 340:
Page 341 and 342:
Page 343 and 344:
Page 345 and 346:
Page 347 and 348:
Page 349 and 350:
Page 351 and 352:
Page 353 and 354:
Page 355 and 356:
Page 357 and 358:
Page 359 and 360:
Page 361 and 362:
Page 363 and 364:
Page 365 and 366:
Page 367 and 368:
Page 369 and 370:
Page 371 and 372:
Page 373 and 374:
Page 375 and 376:
Page 377 and 378:
Page 379 and 380:
Page 381 and 382:
Page 383 and 384:
Page 386 and 387:
Page 388 and 389:
Page 390 and 391:
Page 392 and 393:
Page 394 and 395:
Page 396 and 397:
Page 398 and 399:
Page 400 and 401:
Page 402 and 403:
Chapter 19Technical, economic and p
Page 404 and 405:
Chapter 19 - Technical, economic an
Page 406 and 407:
Page 408 and 409:
Page 410 and 411:
Page 412 and 413:
Page 414 and 415:
Page 416 and 417:
Page 418 and 419:
Page 420 and 421:
Page 422 and 423:
Page 424 and 425:
Page 426 and 427:
Chapter 20Impacts of intellectual p
Page 428 and 429:
Chapter 20 - Impacts of intellectua
Page 430 and 431:
Page 432 and 433:
Page 434 and 435:
Page 436 and 437:
Page 438 and 439:
Page 440 and 441:
Page 442 and 443:
Page 444 and 445:
Page 446:
Page 449 and 450:
Page 451 and 452:
Page 453 and 454:
Page 455 and 456:
Page 457 and 458:
Page 459 and 460:
Page 461 and 462:
Page 463 and 464:
Page 465 and 466:
Page 467 and 468:
Page 469 and 470:
Page 471 and 472:
Page 473 and 474:
Page 475 and 476:
Page 477 and 478:
Page 479 and 480:
Page 481 and 482:
Page 483 and 484:
Page 485 and 486:
Page 487 and 488:
Page 489 and 490:
Page 491 and 492:
Page 494:
This book provides a comprehensive
show all

marker-assisted selection in wheat

You also want an ePaper? Increase the reach of your titles

Delete template?

Save as template?