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Dynamical Systems in Neuroscience:

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52 Electrophysiology of Neuronsvoltage steps-100 mV-60 mV0 mV-10 mVcurrentstime (ms)0 1 2 3 4 5Figure 2.23: Current tracescorrespond<strong>in</strong>g to voltage stepsof various amplitudes; see Ex. 6.can be written <strong>in</strong> the form (2.7) withḡ = ḡ Na + ḡ K and E = ḡNaE Na + ḡ K E Kḡ Na + ḡ K.3. Show that apply<strong>in</strong>g a dc-current I <strong>in</strong> the neuronal modelC ˙V = I − g L (V − E L ) − I other (V )is equivalent to chang<strong>in</strong>g the leak reverse potential E L .4. Steady-state (<strong>in</strong>)activation curves and voltage-sensitive time constants can beapproximated by the Boltzmann (2.11) and Gaussian (2.12) functions, respectively,depicted <strong>in</strong> Fig. 2.20. Expla<strong>in</strong> the mean<strong>in</strong>g of the parameters V 1/2 , k,C base , C amp , V max and σ and f<strong>in</strong>d their values that provide satisfactory fit near therest state V = 0 to the Hodgk<strong>in</strong>-Huxley functions depicted <strong>in</strong> Fig. 2.13.5. (Willms et al. 1999) Consider the curve m p ∞(V ), where m ∞ (V ) is the Boltzmannfunction with parameters V 1/2 and k, and p > 1. This curve can be approximatedby another Boltzmann function with some parameters Ṽ1/2 and ˜k (and p = 1).F<strong>in</strong>d the formulae that relate Ṽ1/2 and ˜k to V 1/2 , k, and p.6. (Willms et al. 1999) Write a MATLAB program that determ<strong>in</strong>es activationand <strong>in</strong>activation parameters via a simultaneous fitt<strong>in</strong>g of current traces from avoltage-clamp experiment similar to the one <strong>in</strong> Fig. 2.23. Assume that the valuesof the voltage pairs, e.g., −60, −10; −100, 0 (mV); are <strong>in</strong> the file v.dat. Thevalues of the current (circles <strong>in</strong> Fig. 2.23) are <strong>in</strong> the file current.dat, and thesampl<strong>in</strong>g times, e.g., 0, 0.25, 0.5, 1, 1.5, 2, 3, 5 (ms), are <strong>in</strong> the file times.dat.7. Modify the MATLAB program from the previous exercise to handle multi-step(Fig. 2.24) and ramp protocols.8. [M.S.] F<strong>in</strong>d the best sequence of step potentials that can determ<strong>in</strong>e activationand <strong>in</strong>activation parameters (a) <strong>in</strong> the shortest time, (b) with the highestprecision.

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