Symbiotic Fungi: Principles and Practice (Soil Biology)

More documents

Recommendations

Info

16 Using Stable Carbon Isotope Labelling 283 of grassland. By this technique it is possible to investigate if this is true for all kinds of grasslands. References Abraham W-R, Hesse C, Pelz O (1998) Ratios of carbon isotopes in microbial lipids as an indicator of substrate usage. Appl Environ Microbiol 64:4202–4209 Bago B, Zipfel W, Williams RM, Jun J, Arreola R, Lammers PJ, Pfeffer PE, Shachar-Hill Y (2002) Translocation and utilization of fungal storage lipid in the arbuscular mycorrhizal symbiosis. Plant Physiol 128:108–124 Bécard G, Fortin JA (1988) Early events of vesicular–arbuscular mycorrhiza formation on Ri T-DNA transformed roots. New Phytol 108:211–218 Beilby JP, Kidby DK (1980) Biochemistry of ungerminated and germinated spores of the vesicular– arbuscular mycorrhizal fungus, Glomus caledonius, changes in neutral and polar lipids. J Lipid Res 21:739–750 Cooper KM, Lösel DM (1978) Lipid physiology of vesicular–arbuscular mycorrhiza — I. Composition of lipids in roots of onion, clover and ryegrass infected with Glomus mosseae. New Phytol 80:143–151 Dawson TE, Brooks PD (2001) Fundamentals of stable isotope chemistry. In: Unkovich M, Pate J, McNeill A, Gibbs DJ (eds) Stable isotope techniques in the study of biological processes and functioning of ecosystems. Kluwer, Dordrecht, pp 1–18 Doner LW, Bécard G (1991) Solubilization of gellan gels by chelation of cations. Biotechnol Tech 5:25–28 Fortin JA, Bécard G, Declerck S, Dalpé Y, St-Arnaud M, Coughlan AP, Piché Y (2002) Arbuscular mycorrhiza on root-organ cultures. Can J Bot 80:1–20 Frostega˚rd A ˚ ,Ba˚a˚th E (1996) The use of phospholipid fatty acid analysis to estimate bacterial and fungal biomass in soil. Biol Fertil Soils 22:59–65 Frostega˚rd A ˚ , Tunlid A, Ba˚a˚th E (1993) Phospholipid fatty acid composition, biomass and activity of microbial communities from two soil types experimentally exposed to different heavy metals. Appl Environ Microbiol 59:3605–3617 Gavito ME, Olsson PA (2003) Allocation of plant carbon to foraging and storage in arbuscular mycorrhizal fungi. FEMS Microbiol Ecol 45:181–187 Gavito ME, Olsson PA, Rouhier H, Medina-Penafiel A, Jakobsen I, Bago A, Azcon-Aguilar C (2005) Temperature constraints on the growth and functioning of root organ cultures with arbuscular mycorrhizal fungi. New Phytol 168:179–188 Graham JH, Hodge NC, Morton JB (1995) Fatty acid methyl ester profiles for characterization of Glomalean fungi and their endomycorrhizae. Appl Environ Microbiol 61:58–64 Johnson D, Leake JR, Ostle N, Ineson P, Read DJ (2002) In situ 13 CO 2 pulse-labelling of upland grassland demonstrates a rapid pathway of carbon flux from arbuscular mycorrhizal mycelia to the soil. New Phytol 153:327–334 Maldonado-Mendoza IE, Dewbre GR, Harrison MJ (2001) A phosphate transporter gene from the extra-radical mycelium of an arbuscular mycorrhizal fungus Glomus intraradices is regulated in response to phosphate in the environment. Mol Plant Microbe Interact 14:1140–1148 Müller MM, Kantola R, Kitunen V (1994) Combining sterol and fatty acid profiles for the characterization of fungi. Mycol Res 98:593–603 Nagy S, Nordby HE, Nemec S (1980) Composition of lipids in roots of six citrus cultivars infected with the vesicular arbuscular mycorrhizal fungus Glomus mosseae. New Phytol 85:377–384 Nakano A, Takahashi K, Kimura M (1999) The carbon origin of arbuscular mycorrhizal fungi estimated from d 13 C values of individual spores. Mycorrhiza 9:41–47
284 P.A. Olsson Nakano A, Takahashi K, Kimura M (2001) Effect of host shoot clipping on carbon and nitrogen sources for arbuscular mycorrhizal fungi. Mycorrhiza 10:287–293 Olsson PA (1999) Minireview — Signature fatty acids provide tools for determination of distribution and interactions of mycorrhizal fungi in soil. FEMS Microbiol Ecol 29:303–310 Olsson PA, Ba˚a˚th E, Jakobsen I, Söderström B (1995) The use of phospholipid and neutral lipid fatty acids to estimate biomass of arbuscular mycorrhizal fungi in soil. Mycol Res 99:623–629 Olsson PA, Gavito ME, Van Aarle IM, Bengtson P, Bengtsson G (2005) Incorporation into signature fatty acids as an assay for carbon allocation in arbuscular mycorrhiza. Appl Environ Microbiol 71: 2592–2599 Olsson PA, Hansson MC, Burleigh SH (2006) Effect of P availability on temporal dynamics of carbon allocation and Glomus intraradices high-affinity P transporter gene induction in arbuscular mycorrhiza. Appl Environ Microbiol 72:4115–4120 Olsson PA, Johansen A (2000) Lipid and fatty acid composition of hyphae and spores of arbuscular mycorrhizal fungi at different growth stages. Mycol Res 104:429–434 Olsson PA, Johnson NC (2005) Tracking carbon from the atmosphere to the rhizosphere. Ecol Lett 8:1264–1270 Olsson PA, van Aarle IM, Allaway WG, Ashford AE, Rouhier H (2002) Phosphorus effects on metabolic processes in monoxenic arbuscular mycorrhiza cultures. Plant Physiol 130:1162– 1171 Staddon PL, Robinson D, Graves JD, Fitter AH (1999) The d 13 C signature of the external phase of Glomus mycorrhizal fungus: determination and implications. Soil Biol Bioch 31:1067–1070 Stahl PD, Klug MJ (1996) Characterization and differentiation of filamentous fungi based on fatty acid composition. Appl Environ Microbiol 62:4136–4146 Sylvia DM, Fuhrmann JJ, Hartel PG, Zuberer DA (1998) Principles and Applications of Soil Microbiology. Prentice-Hall, Upper Saddle River, NJ van Aarle IM, Olsson PA (2003) The relation of fungal lipid accumulation to development of mycelial structures in two arbuscular mycorrhizal fungi. Appl Environ Microbiol 69: 6762–6767 White DC, Davis WM, Nickels JS, King JD, Bobbie RJ (1979) Determination of the sedimentary microbial biomass by extractible lipid phosphate. Oecologia 40:51–62
Page 2 and 3:
Soil Biology Volume 18 Series Edito
Page 4 and 5:
Ajit Varma l Amit C. Kharkwal Edito
Page 6 and 7:
Foreword So old, so new... More tha
Page 8 and 9:
Foreword vii Little AE, Robinson CJ
Page 10 and 11:
x Preface work in this challenging
Page 12 and 13:
xii Contents 9 Role of Root Exudate
Page 14 and 15:
Contributors L.K. Abbott School of
Page 16 and 17:
Contributors xvii Falko Feldmann Ju
Page 18 and 19:
Contributors xix K. Nara Asian Natu
Page 20 and 21:
Contributors xxi Marc St-Arnaud Ins
Page 22 and 23:
2 A. Das and A. Varma Fig. 1.1 Type
Page 24 and 25:
4 A. Das and A. Varma the scientifi
Page 26 and 27:
6 A. Das and A. Varma 1.3.2 Symbiot
Page 28 and 29:
8 A. Das and A. Varma all the root
Page 30 and 31:
10 A. Das and A. Varma 1. Such poly
Page 32 and 33:
12 A. Das and A. Varma 1.3.3.9 Nitr
Page 34 and 35:
14 A. Das and A. Varma about 1-2 mm
Page 36 and 37:
16 A. Das and A. Varma fixed nitrog
Page 38 and 39:
18 A. Das and A. Varma Mycorrhizae
Page 40 and 41:
20 A. Das and A. Varma Fig. 1.6 Dia
Page 42 and 43:
22 A. Das and A. Varma a b Root hai
Page 44 and 45:
24 A. Das and A. Varma intracellula
Page 46 and 47:
26 A. Das and A. Varma Becker A, Ni
Page 48 and 49:
28 A. Das and A. Varma Trappe JM, B
Page 50 and 51:
30 A. Jumpponen were once active in
Page 52 and 53:
32 A. Jumpponen GA, USA) to avoid d
Page 54 and 55:
34 A. Jumpponen 2.2.3.6 Cloning, Se
Page 56 and 57:
36 A. Jumpponen Table 2.1 Fungi det
Page 58 and 59:
38 A. Jumpponen of the community st
Page 60 and 61:
40 A. Jumpponen Girvan MS, Bullimor
Page 62 and 63:
42 I.A.F. Djuuna et al. 1991). Crop
Page 64 and 65:
44 I.A.F. Djuuna et al. 3.2.2 Indir
Page 66 and 67:
46 I.A.F. Djuuna et al. Mycorrhiza
Page 68 and 69:
48 I.A.F. Djuuna et al. Boomsma CR,
Page 70 and 71:
50 I.A.F. Djuuna et al. Saito M (19
Page 72 and 73:
52 M. Giovannetti et al. evidenced
Page 74 and 75:
54 M. Giovannetti et al. a c e Ster
Page 76 and 77:
56 M. Giovannetti et al. 4.2.4 Rema
Page 78 and 79:
58 M. Giovannetti et al. a b c Fig.
Page 80 and 81:
60 M. Giovannetti et al. to 4.1 mm
Page 82 and 83:
62 M. Giovannetti et al. The detect
Page 84 and 85:
64 M. Giovannetti et al. Jones MD,
Page 86 and 87:
66 A. Gobert and C. Plassard NO3 fl
Page 88 and 89:
68 A. Gobert and C. Plassard After
Page 90 and 91:
70 A. Gobert and C. Plassard with k
Page 92 and 93:
72 A. Gobert and C. Plassard 10 9 2
Page 94 and 95:
74 A. Gobert and C. Plassard Fig. 5
Page 96 and 97:
76 A. Gobert and C. Plassard connec
Page 98 and 99:
78 A. Gobert and C. Plassard any ti
Page 100 and 101:
80 A. Gobert and C. Plassard Net fl
Page 102 and 103:
82 A. Gobert and C. Plassard a Rati
Page 104 and 105:
84 A. Gobert and C. Plassard - upta
Page 106 and 107:
86 A. Gobert and C. Plassard Table
Page 108 and 109:
88 A. Gobert and C. Plassard Newman
Page 110 and 111:
90 I.M. van Aarle as mycorrhizal hy
Page 112 and 113:
92 I.M. van Aarle a wash buffer. Th
Page 114 and 115:
94 I.M. van Aarle l Usually 20-50 m
Page 116 and 117:
96 I.M. van Aarle Fig. 6.1 Extramat
Page 118 and 119:
98 I.M. van Aarle A disadvantage of
Page 120 and 121:
Chapter 7 In Vitro Compartmented Sy
Page 122 and 123:
7 In Vitro Compartmented Systems to
Page 124 and 125:
Page 126 and 127:
Page 128 and 129:
Page 130 and 131:
Page 132 and 133:
Page 134 and 135:
Page 136 and 137:
Page 138 and 139:
Page 140 and 141:
Page 142 and 143:
Chapter 8 Use of the Autofluorescen
Page 144 and 145:
8 Use of the Autofluorescence Prope
Page 146 and 147:
Page 148 and 149:
Page 150 and 151:
Page 152 and 153:
Page 154 and 155:
Page 156 and 157:
Page 158 and 159:
Page 160 and 161:
Chapter 9 Role of Root Exudates and
Page 162 and 163:
9 Role of Root Exudates and Rhizosp
Page 164 and 165:
Page 166 and 167:
Page 168 and 169:
Page 170 and 171:
Page 172 and 173:
Page 174 and 175:
Page 176 and 177:
Page 178 and 179:
Chapter 10 Assessing the Mycorrhiza
Page 180 and 181:
10 Assessing the Mycorrhizal Divers
Page 182 and 183:
Page 184 and 185:
Page 186 and 187:
Page 188 and 189:
Page 190 and 191:
Page 192 and 193:
Page 194:
Page 197 and 198:
178 D. Krüger et al. 8. Wash the p
Page 199 and 200:
180 D. Krüger et al. Table 10.1 Ty
Page 201 and 202:
182 D. Krüger et al. appear are in
Page 203 and 204:
184 D. Krüger et al. tool such as
Page 205 and 206:
186 D. Krüger et al. Ishikawa J, T
Page 207 and 208:
188 D. Krüger et al. Sammeth M, Ro
Page 209 and 210:
190 Z.M. Solaiman hyphae have been
Page 211 and 212:
192 Z.M. Solaiman 11.2.2 Isolation
Page 213 and 214:
194 Z.M. Solaiman 11.3 Conclusions
Page 215 and 216:
Chapter 12 Interaction with Soil Mi
Page 217 and 218:
12 Interaction with Soil Microorgan
Page 219 and 220:
Page 221 and 222:
Page 223 and 224:
Page 225 and 226:
Page 227 and 228:
Page 229 and 230:
Chapter 13 Isolation, Cultivation a
Page 231 and 232:
13 Isolation, Cultivation and In Pl
Page 233 and 234:
Page 235 and 236:
Page 237 and 238:
Page 239 and 240:
Page 241 and 242:
Page 243 and 244:
Page 245 and 246:
228 K. Vogel-Mikusˇ et al. only be
Page 247 and 248:
230 K. Vogel-Mikusˇ et al. Fig. 14
Page 249 and 250: 232 K. Vogel-Mikusˇ et al. such sp
Page 251 and 252: 234 K. Vogel-Mikusˇ et al. STIM de
Page 253 and 254: 236 K. Vogel-Mikusˇ et al. transfe
Page 255 and 256: Table 14.1 Element concentrations w
Page 257 and 258: 240 K. Vogel-Mikusˇ et al. Fig. 14
Page 259 and 260: 242 K. Vogel-Mikusˇ et al. Frey B,
Page 261 and 262: 244 E. Dumas-Gaudot et al. TEMED N,
Page 263 and 264: 246 E. Dumas-Gaudot et al. system i
Page 265 and 266: 248 E. Dumas-Gaudot et al. Bromophe
Page 267 and 268: 250 E. Dumas-Gaudot et al. taken to
Page 269 and 270: 252 E. Dumas-Gaudot et al. Note 6:
Page 271 and 272: 254 E. Dumas-Gaudot et al. by Bradf
Page 273 and 274: 256 E. Dumas-Gaudot et al. 3. Take
Page 275 and 276: 258 E. Dumas-Gaudot et al. solubili
Page 277 and 278: 260 E. Dumas-Gaudot et al. Table 15
Page 279 and 280: 262 E. Dumas-Gaudot et al. Table 15
Page 281 and 282: 264 E. Dumas-Gaudot et al. Followin
Page 283 and 284: 266 E. Dumas-Gaudot et al. Once hom
Page 285 and 286: 268 E. Dumas-Gaudot et al. to both
Page 287 and 288: 270 E. Dumas-Gaudot et al. were the
Page 289 and 290: 272 E. Dumas-Gaudot et al. Dumas-Ga
Page 291 and 292: 274 E. Dumas-Gaudot et al. Valot B,
Page 293 and 294: 276 P.A. Olsson Fig. 16.1 Schematic
Page 295 and 296: 278 P.A. Olsson Furthermore, C tran
Page 297 and 298: 280 P.A. Olsson in AM fungi and a h
Page 299: 282 P.A. Olsson (Graham et al. 1995
Page 303 and 304: 286 X.H. He et al. In many cases, N
Page 305 and 306: 288 X.H. He et al. Table 17.1 Exper
Page 307 and 308: 290 X.H. He et al. 17.3.1.1 Comment
Page 309 and 310: Chapter 18 Analyses of Ecophysiolog
Page 311 and 312: 18 Analyses of Ecophysiological Tra
Page 323 and 324: 308 I. Brito et al. fungi, little i
Page 325 and 326: 310 I. Brito et al. 60% of moisture
Page 327 and 328: 312 I. Brito et al. Thompson 1990;
Page 329 and 330: 314 I. Brito et al. 19.8 Crop Rotat
Page 331 and 332: 316 I. Brito et al. References Abbo
Page 333 and 334: 318 I. Brito et al. Smith SE, Read
Page 335 and 336: 320 F. Feldmann et al. inoculum of
Page 337 and 338: 322 F. Feldmann et al. Table 20.1 B
Page 339 and 340: 324 F. Feldmann et al. transferred
Page 341 and 342: 326 F. Feldmann et al. 20.3.3 The A
Page 343 and 344: 328 F. Feldmann et al. Inoculum is
Page 345 and 346: 330 F. Feldmann et al. Fig. 20.5 Pr
Page 347 and 348: 332 F. Feldmann et al. value for th
Page 349 and 350: 334 F. Feldmann et al. of abiotic a
Page 351 and 352:
336 F. Feldmann et al. Lackie SM, B
Page 353 and 354:
338 M. Vestberg and A.C. Cassells b
Page 355 and 356:
340 M. Vestberg and A.C. Cassells M
Page 357 and 358:
342 M. Vestberg and A.C. Cassells a
Page 359 and 360:
344 M. Vestberg and A.C. Cassells T
Page 361 and 362:
346 M. Vestberg and A.C. Cassells d
Page 363 and 364:
348 M. Vestberg and A.C. Cassells M
Page 365 and 366:
350 M. Vestberg and A.C. Cassells 2
Page 367 and 368:
352 M. Vestberg and A.C. Cassells 2
Page 369 and 370:
354 M. Vestberg and A.C. Cassells C
Page 371 and 372:
356 M. Vestberg and A.C. Cassells G
Page 373 and 374:
358 M. Vestberg and A.C. Cassells P
Page 375 and 376:
360 M. Vestberg and A.C. Cassells V
Page 377 and 378:
362 A. Baldi et al. the capabilitie
Page 379 and 380:
364 A. Baldi et al. 22.2.3 Initiati
Page 381 and 382:
366 A. Baldi et al. 2. Place inocul
Page 383 and 384:
368 A. Baldi et al. 22.5 Analysis 2
Page 385 and 386:
370 A. Baldi et al. 22.5.4 Phenylal
Page 387 and 388:
372 A. Baldi et al. Nicholas JB, Jo
Page 389 and 390:
374 A. Baldi et al. Among these, fu
Page 391 and 392:
376 A. Baldi et al. 3. Place one ex
Page 393 and 394:
378 A. Baldi et al. 23.4 Analysis F
Page 395 and 396:
380 A. Baldi et al. Chattopadhyay S
Page 397 and 398:
382 A. Sirrenberg et al. physical c
Page 399 and 400:
384 A. Sirrenberg et al. Fig. 24.1
Page 401 and 402:
Page 403 and 404:
Page 405 and 406:
390 A. Sirrenberg et al. in Fig. 24
Page 407 and 408:
392 A. Sirrenberg et al. 24.5.2 Tru
Page 409 and 410:
394 K. Haselwandter and G. Winkelma
Page 411 and 412:
Page 413 and 414:
Page 415 and 416:
Page 417 and 418:
Page 419 and 420:
404 E. Mohammadi Goltapeh et al. Fi
Page 421 and 422:
406 E. Mohammadi Goltapeh et al. Th
Page 423 and 424:
408 E. Mohammadi Goltapeh et al. 26
Page 425 and 426:
410 E. Mohammadi Goltapeh et al. co
Page 427 and 428:
412 E. Mohammadi Goltapeh et al. Tw
Page 429 and 430:
414 E. Mohammadi Goltapeh et al. Co
Page 431 and 432:
416 E. Mohammadi Goltapeh et al. qu
Page 433 and 434:
418 E. Mohammadi Goltapeh et al. 26
Page 435 and 436:
420 E. Mohammadi Goltapeh et al. Ch
Page 437 and 438:
Index A A. bisporus var. burnettii,
Page 439 and 440:
Index 425 Dark septate root endophy
Page 441 and 442:
Index 427 Leghemoglobin, 11 Lentinu
Page 443 and 444:
Index 429 Proteomics, 244 Protoplas
show all

Symbiotic Fungi: Principles and Practice (Soil Biology)

You also want an ePaper? Increase the reach of your titles

Delete template?

Save as template?