HPG Variant - Bioinformatics and Genomics Department at CIPF
HPG Variant - Bioinformatics and Genomics Department at CIPF
HPG Variant - Bioinformatics and Genomics Department at CIPF
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<strong>HPG</strong> <strong>Variant</strong><strong>Variant</strong> CallingProcess of searching for variants in alignedsequencesBAM input → VCF outputCurrent solutions:GATK: JavaSAMtools mPileup: CSequential software → running for hoursSt<strong>at</strong>us: Porting GATK pipeline (see [2])21
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