HPG Variant - Bioinformatics and Genomics Department at CIPF
HPG Variant - Bioinformatics and Genomics Department at CIPF
HPG Variant - Bioinformatics and Genomics Department at CIPF
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<strong>HPG</strong> <strong>Variant</strong>GWAS Analysis (I)Genomic <strong>and</strong> family-based st<strong>at</strong>istical testsParallel implement<strong>at</strong>ions where possiblePrecursor: PlinkSerial implement<strong>at</strong>ion in C++Can't manage ultra-large files, memory problemPED & MAP form<strong>at</strong>sUsed in PlinkInform<strong>at</strong>ion about family rel<strong>at</strong>ionships, genotypes <strong>and</strong>locusSuperseded by the PED & VCF combin<strong>at</strong>ion18
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