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FA 5 Progress Report WV-INBRE - Joan C. Edwards School of ...

FA 5 Progress Report WV-INBRE - Joan C. Edwards School of ...

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Program Director/Principal Investigator (Last, First, Middle): Rankin, Gary O 40that do not express. The current list <strong>of</strong> proteins that have been expressed are N474I, T304A andS209A. We are working on E300V currently and have expressed R307L which has an impact onthis project.The purification <strong>of</strong> the expressed protein is being carried out according to protocol received fromthe lab <strong>of</strong> Dr. Timothy S. Tracy. We have successfully purified the wild type form <strong>of</strong> the protein and2 <strong>of</strong> the expressed mutated forms. Purification is a week long process that takes approximately 8hours <strong>of</strong> steady work to reach a stopping point. The time factor and use <strong>of</strong> undergraduates at thispoint make it very difficult to manage schedules to be sure we can cover 8 hours in a day. Theaddition <strong>of</strong> a half time technician would help in this area.With the success <strong>of</strong> expression and now purification we are in the process <strong>of</strong> beginning our kineticanalysis. The kinetic analysis is a faster process and it is foreseeable to carry out 2 experiments aday. Leaving us with the task <strong>of</strong> increasing rate <strong>of</strong> purification so that kinetic analysis can continueat an acceptable rate.The molecular modeling part <strong>of</strong> the experiment has been completed in terms <strong>of</strong> looking atcorrelations <strong>of</strong> distances and hydrogen bonding. We are still trying to determine a viable way toaddress stacking. MM-PBSA has been run for the majority <strong>of</strong> our mutations in silico. We are in ahold to see if this data will correlate with the kinetics.We have been successful and an additional centrifuge, obtained from an equipment grant, will allowus to speed up our processes and finish the kinetics an d put out publications. We are submittingan area grant to the NIH before the February 25th deadline. We were close but after discussionswith my mentor decided we needed to change a few things to make it more competitive. My writingskills need improved and I am looking for a good grant writing workshop. The publications will beginto come forth upon completion <strong>of</strong> kinetics. I have had the unfortunate experience that although themodeling data is promising on its own it needs to be completed with actual kinetics data. This hasbeen mentioned to me at several <strong>of</strong> the meetings at which we presented posters.PROTECTION AGAINST RESEARCH RISKSN 1. Will human subjects be involved next year?N 2. Will vertebrate animals be used next year?N 3. Will recombinant DNA experiment(s) be conducted next year?N 4. Are there potential hazards to laboratory workers (carcinogens, pathogens, ionizing radiation, etc.)involved in the proposed research for next year? If yes, identify:N5. Will any <strong>of</strong> the research-risk categories,not involved next year, be involved future years? If yes, identify:PHS 2590 (Rev. 06/09)Continuation Format Page

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