Package 'metagenomeSeq' - Bioconductor

calculateEffectiveSamples 5ValueA MRexperiment object.See Alsoload_meta load_phenoData newMRexperiment load_biomExamples#library(biom)#rich_dense_file = system.file("extdata", "rich_dense_otu_table.biom", package = "biom")#x = read_biom(rich_dense_file)#biom2MRexperiment(x)calculateEffectiveSamplesEstimated effective samples per featureDescriptionCalculates the number of estimated effective samples per feature from the output of a fitZig run.The estimated effective samples per feature is calculated as the sum_1^n (n = number of samples)1-z_i where z_i is the posterior probability a feature belongs to the technical distribution.UsagecalculateEffectiveSamples(obj)ArgumentsobjThe output of fitZig run on a MRexperiment object.ValueA list of the estimated effective samples per feature.See AlsofitZig MRcoefs MRfulltable