Package 'metagenomeSeq' - Bioconductor

44 zigControlExamplesdata(mouseData)head(uniqueFeatures(mouseData[1:100,],cl=pData(mouseData)[,3]))zigControlSettings for the fitZig functionDescriptionSettings for the fitZig functionUsagezigControl(tol = 1e-04, maxit = 10, verbose = TRUE)ArgumentstolmaxitverboseThe tolerance for the difference in negative log likelihood estimates for a featureto remain active.The maximum number of iterations for the expectation-maximization algorithm.Whether to display iterative step summary statistics or not.ValueThe value for the tolerance, maximum no. of iterations, and the verbose warning.NotefitZig makes use of zigControl.See AlsofitZig cumNorm plotOTUExamplescontrol =zigControl(tol=1e-10,maxit=10,verbose=FALSE)