Oncology Probes
Oncology Probes Oncology Probes
Microdeletion probesMicrodeletion syndromes are usually caused by a chromosomal deletion spanning one or several genesthat are too small to be detected under the microscope using conventional cytogenetic methods.Depending on the size of the deletion, FISH or other methods of DNA analysis can be employed toidentify such deletions.Description Cat# PageMD Miller-Dieker LIS (17p13 ) / Smith-Magenis RAI (17p11) KBI-40101 77MD DiGeorge “N25” (22q11) / 22q13 (SHANK3) KBI-40102 71,73MD DiGeorge Tuple (22q11) / 22q13 (SHANK3) KBI-40103 72,73MD DiGeorge T-box1 (22q11) / 22q13 (SHANK3) KBI-40104 72,73MD DiGeorge II (10p14) / SE 10 KBI-40105 73MD Cri-Du-Chat CTNND (5p15) / 5q31 KBI-40106 78MD Wolf-Hirschhorn WHSC1 (4p16) / SE 4 KBI-40107 78MD X-Inactivation XIST (Xq13) / SE X KBI-40108 79Microdeletion ProbesMD Prader-Willi SNRPN (15q11) / PML(15q24) KBI-40109 75MD Angelman UBE3A (15q11) / PML(15q24) KBI-40110 76MD Williams-Beuren ELN (7q11) / 7q22 KBI-40111 76MD Short Stature (Xp22) / SE X KBI-40112 79MD NSD1 (5q35)/ hTERT (5p15) KBI-40113 74MD NF1 (17q11) / MPO (17q22) KBI-40114 74MD STS (Xp22) / KAL (Xp22) / SE X TC KBI-40115 8070MD IGF1R (15q26) / 15q11 KBI-40116 81
DiGeorge / Velocardiofacial Syndrome (VCFS)Microdeletion of chromosome 22 accounts for morethan 90% of cases of DiGeorge anomaly which hasan incidence of 1 in 4000 live births. Deletionsof chromosome 22q11.2 are found in the vastmajority of patients with DiGeorge anomaly andVCFS. Most deletions are de novo, with 10% or lessinherited from an affected parent. All probes thatare currently in use to detect deletions in DiGeorgeand VCFS are located within the described minimalcritical region of 1.5 Mb.MD DiGeorge “N25” (22q11) / 22q13 (SHANK3)The DiGeorge “N25” probe was the first commercialmicrodeletion probe for chromosome 22q and detects the locusD22S75. This marker is located between DGCR2 and CLH22(Clathrin). Both genes have been extensively investigated andtheir role in DiGeorge syndrome is well established.The DiGeorge ”N25” region probe covers the marker “N25”(D22S75) and adjacent region of CLH22 (Clathrin gene region)and DGCR2 (DiGeorge critical region gene 2). The SHANK3probe at 22q13 is serving as internal control.Cat.# KBI-40102 MD DiGeorge “N25” (22q11) / 22q13 (SHANK3)D22S1660DGCR2"N25"250 KBCLH22D22S164622q11.2D22S55322TUPLERH845722q13ARSASHANK3130 KBRH38881MD DiGeorge "N25" (22q11) / 22q13 (SHANK3) probe hybridized toa normal metaphase (2R2G).Literature:Sirotkin et al, 1996, Hum Mol Genet, 5: 617-624.Holmes et al, 1997, Hum Mol Genet, 6: 357-367.Wilson, et al, 2003, J Med Genet 40; 575-584Luciani, et al, 2003, J Med Genet 40; 690-696Ordering information Gene Region Tests Cat#MD DiGeorge “N25” (22q11) / 22q13 (SHANK3) N25 10 KBI-40102Microdeletion Probes71
- Page 21: ON hTERC (3q26) / 3q11Amplification
- Page 25 and 26: ON hTERT (5p15) / 5q31The hTERT / 5
- Page 27 and 28: ON MDS 7q- (7q22; 7q35) / SE 7 TCTh
- Page 29 and 30: Acute Myeloid Leukemia (AML)At leas
- Page 31 and 32: ON RARA (17q21) BreakThis break apa
- Page 33 and 34: ON ETV6 (TEL) (12p13) BreakETV6 (TE
- Page 37 and 38: ON MM 1q21 / 8p21Amplifications of
- Page 39: ON MM 1q21 / SRD (1p36)Frequent los
- Page 42 and 43: ON IGH (14q32) BreakChromosomal rea
- Page 44 and 45: ON BCL6 (3q27) BreakChromosomal tra
- Page 46 and 47: Oncology probes - Solid TumorsIn so
- Page 48 and 49: ON TOP2A (17q21) / Her2 (17q12) / S
- Page 50 and 51: Bladder CancerON p16 (9p21) / 9q21
- Page 52 and 53: NeuroblastomaAccording to the Inter
- Page 54 and 55: ON p53 (17p13) / MPO (17q22) “ISO
- Page 56 and 57: ON SYT (18q11) BreakThe characteris
- Page 58 and 59: ON MDM2 (12q15) / SE 12Fibrosarcoma
- Page 60 and 61: ON PTEN (10q23) / SE 10The gene ‘
- Page 62 and 63: ON CCND1 (11q13) / SE 11CCND1 (also
- Page 64 and 65: ON BCL6 (3q27) Break (tissue)Chromo
- Page 66 and 67: Preimplantation Genetic ScreeningFI
- Page 68 and 69: Prenatal probesPrenatal cytogenetic
- Page 72 and 73: MD DiGeorge “TUPLE” (22q11) / 2
- Page 74 and 75: MD NSD1 (5q35) / hTERT (5p15)NSD1 m
- Page 76 and 77: MD Angelman UBE3A (15q11) / PML (15
- Page 78 and 79: MD Wolf-Hirschhorn WHSC1 (4p16)Wolf
- Page 80 and 81: MD STS (Xp22) / KAL (Xp22) / SE X T
- Page 82 and 83: Sub-Telomere probesTelomeres are sp
- Page 84 and 85: Satellite Enumeration probesThe pri
- Page 86 and 87: Whole Chromosome probesThe Poseidon
- Page 88 and 89: Arm Specific ProbesArm Specific Pro
- Page 90 and 91: Mouse FISH ProbesNew applications f
- Page 92 and 93: Chromogenic In Situ HybridizationCh
- Page 94 and 95: cell culture mediaKREAvital cytogen
- Page 96 and 97: PhytohaemagglutininPhytohaemaggluti
- Page 98 and 99: Kits and ReagentsThe ready-to-use p
- Page 100 and 101: FISHBright labeling kitsThe FISHBr
- Page 102 and 103: Product Selection GuideULSArray CGH
- Page 104 and 105: DNA LABELINGULS arrayCGH Labeling K
- Page 106 and 107: RNA LABELINGAMPLIFICATION AND aRNA
- Page 108 and 109: PROTEIN LABELINGPROTEIN LABELING AN
- Page 110 and 111: Antibody LABELINGPlatinumLink Antib
- Page 112 and 113: Technical AppendixThe Poseidon Prob
- Page 114 and 115: TERMS AND CONDITIONSTerms and Condi
- Page 116 and 117: Product IndexOncology probes - Hema
- Page 118 and 119: Satellite Enumeration probesSE = Sa
DiGeorge / Velocardiofacial Syndrome (VCFS)Microdeletion of chromosome 22 accounts for morethan 90% of cases of DiGeorge anomaly which hasan incidence of 1 in 4000 live births. Deletionsof chromosome 22q11.2 are found in the vastmajority of patients with DiGeorge anomaly andVCFS. Most deletions are de novo, with 10% or lessinherited from an affected parent. All probes thatare currently in use to detect deletions in DiGeorgeand VCFS are located within the described minimalcritical region of 1.5 Mb.MD DiGeorge “N25” (22q11) / 22q13 (SHANK3)The DiGeorge “N25” probe was the first commercialmicrodeletion probe for chromosome 22q and detects the locusD22S75. This marker is located between DGCR2 and CLH22(Clathrin). Both genes have been extensively investigated andtheir role in DiGeorge syndrome is well established.The DiGeorge ”N25” region probe covers the marker “N25”(D22S75) and adjacent region of CLH22 (Clathrin gene region)and DGCR2 (DiGeorge critical region gene 2). The SHANK3probe at 22q13 is serving as internal control.Cat.# KBI-40102 MD DiGeorge “N25” (22q11) / 22q13 (SHANK3)D22S1660DGCR2"N25"250 KBCLH22D22S164622q11.2D22S55322TUPLERH845722q13ARSASHANK3130 KBRH38881MD DiGeorge "N25" (22q11) / 22q13 (SHANK3) probe hybridized toa normal metaphase (2R2G).Literature:Sirotkin et al, 1996, Hum Mol Genet, 5: 617-624.Holmes et al, 1997, Hum Mol Genet, 6: 357-367.Wilson, et al, 2003, J Med Genet 40; 575-584Luciani, et al, 2003, J Med Genet 40; 690-696Ordering information Gene Region Tests Cat#MD DiGeorge “N25” (22q11) / 22q13 (SHANK3) N25 10 KBI-40102Microdeletion <strong>Probes</strong>71