PResident's RePORt 2009/2010 - University College Cork
PResident's RePORt 2009/2010 - University College Cork PResident's RePORt 2009/2010 - University College Cork
Foreword UCC at a Glance Academic Developments Teaching and Learning Research College Reports: Arts, Celtic Studies and Social Sciences Business and Law Medicine and Health Science, Engineering and Food Science Events Student Experience Sports and Recreation Buildings and Estates Cork University Press Finance Governing Body IRIS Appendix 202 Institutional Research Information System CLICK HERE to return to the President’s Report · Carroll, James; Draper, Lorraine A; O’Connor, Paula M; Coffey, Aidan; Hill, Colin; Ross, Paul R; Cotter, Paul D; O’Mahony, Jim (2010) ‘Comparison of the activities of the lantibiotics nisin and lacticin 3147 against clinically significant mycobacteria’. International journal of antimicrobial agents, 36 (2):132-136. · Claesson, M. J.,Cusack, S.,O’Sullivan, O.,Greene-Diniz, R.,de Weerd, H.,Flannery, E.,Marchesi, J. R.,Falush, D.,Dinan, T.,Fitzgerald, G.,Stanton, C.,van Sinderen, D.,O’Connor, M.,Harnedy, N.,O’Connor, K.,Henry, C.,O’Mahony, D.,Fitzgerald, A. P.,Shanahan, F.,Twomey, C.,Hill, C.,Ross, R. P.,O’Toole, P. W. (2010) ‘Microbes and Health Sackler Colloquium: Composition, variability, and temporal stability of the intestinal microbiota of the elderly’. Proc Natl Acad Sci U S A. · Clarke, G; Fitzgerald, P; Hennessy, AA; Cassidy, EM; Quigley, EMM; Ross, P; Stanton, C; Cryan, JF; Dinan, TG (2010) ‘Marked elevations in pro-inflammatory polyunsaturated fatty acid metabolites in females with irritable bowel syndrome’. Journal of lipid research, 51:1186-1192. · Clarke, G; O’Mahony, SM; Hennessy, AA; Ross, P; Stanton, C; Cryan, JF; Dinan, TG (2009) ‘Chain reactions: early-life stress alters the metabolic profile of plasma polyunsaturated fatty acids in adulthood’. Behavioural brain research, 205 (1):319-321. · Clarke, G; Quigley, EM; Cryan, JF; Dinan, TG (2009) ‘Irritable bowel syndrome: towards biomarker identification’. Trends in molecular medicine, 15 (10):478-489. · Codling, Caroline; O’Mahony, Liam; Shanahan, Fergus; Quigley, Eamonn MM, Marchesi, Julian R. (2010) ‘A Molecular Analysis of Fecal and Mucosal Bacterial Communities in Irritable Bowel Syndrome’. Digestive Diseases and Sciences, 55 (2):392-397. · Connolly, A; Hearty, A; Nugent, A; McKevitt, A; Boylan, E; Flynn, A; Gibney, MJ (2010) ‘Pattern of intake of food additives associated with hyperactivity in Irish children and teenagers’. Food Additives and Contaminants Part A-Chemistry Analysis Control Exposure & Risk Assessment, 27:447-456. · Cronin, M; Morrissey, D; Rajendran, S; El Mashad, SM; van Sinderen, D; O’Sullivan, GC; Tangney, M (2010) ‘Orally administered bifidobacteria as vehicles for delivery of agents to systemic tumors’. Molecular Therapy, 18 (7):1397-1407. · Culligan, EP; Hill, C; Sleator, RD (2009) ‘Probiotics and gastrointestinal disease: successes, problems and future prospects’. Gut, 1 (1). · Daly, KM; Upton, M; Sandiford, SK; Draper, LA; Wescombe, PA; Jack, RW; O’Connor, PM; Rossney, A; Gotz, F; Hill, C; Cotter, PD; Ross, RP; Tagg, JR (2010) ‘Production of the Bsa Lantibiotic by Community-Acquired Staphylococcus aureus Strains’. Journal of bacteriology, 192:1131-1142. · Dinan, TG; Clarke, G; Quigley, EMM; Scott, LV; Shanahan, F; Cryan, J; Cooney, J; Keeling, PWN (2010) ‘Enhanced cholinergic-mediated increase in the pro-inflammatory cytokine IL-6 in irritable bowel syndrome: Role of muscarinic receptors’. American Journal of Gastroenterology. · Dinan, Timothy G; Cryan, John; Shanahan, Fergus; Keeling, PW Napoleon; Quigley, Eamonn MM (2010) ‘IBs: an epigenetic perspective’. Nature Reviews Gastroenterology & Hepatology, 7 (8):465-471. · Doherty, SB; Wang, L; Ross, RP; Stanton, C; Fitzgerald, GF; Brodkorb, A (2010) ‘Efficacy of whey protein gel networks as potential viability-enhancing scaffolds for cell immobilization of Lactobacillus rhamnosus GG’. Rna-A Publication of The Rna Society, 80:231-241. · Doherty, SB; Wang, L; Ross, RP; Stanton, C; Fitzgerald, GF; Brodkorb, A (2010) ‘Use of viability staining in combination with flow cytometry for rapid viability assessment of Lactobacillus rhamnosus GG in complex protein matrices’. Journal of Microbiological Methods, 82 (3):301-310. · Falvey, EC; McCarthy, C; O’Connor, TM; Shanahan, F; Molloy, MG; Plant, BJ (2010) ‘Exercise-induced bronchoconstriction and exercise testing in an international rugby union team’. Thorax, 65 (9):843-844. · Finger, BC,Dinan, TG,Cryan, JF (2010) ‘Leptin-deficient mice retain normal appetitive spatial learning yet exhibit marked increases in anxiety-related behaviours’. Psychopharmacology, 210:559-568. · Fitzgerald P, Cassidy E, Clarke G, Scully P, Barry S, Quigley E, Shanahan F, Cryan JF, Dinan TG (2010) ‘Tryptophan catabolism in females with irritable bowel syndrome: relationship to interferon-gamma, severity of symptoms and psychiatric co-morbidity’. Neurogastroenterol Motil. 202
Foreword UCC at a Glance Academic Developments Teaching and Learning Research College Reports: Arts, Celtic Studies and Social Sciences Business and Law Medicine and Health Science, Engineering and Food Science Events Student Experience Sports and Recreation Buildings and Estates Cork University Press Finance Governing Body IRIS Appendix 203 Institutional Research Information System CLICK HERE to return to the President’s Report · Flynn, A; Hirvonen, T; Mensink; GB, Ocke, MC; Serra-Majem, L; Stos, K; Szponar, L; Tetens, I; Turrini, A; Fletcher, R; Wildemann, T (2009) ‘Intake of selected nutrients from foods, from fortification and from supplements in various European countries’. Food & nutrition research, 53 (Suppl 1):1-51. · Geaney, F.,Harrington, J.,Fitzgerald, A. P.,Perry, I. J. (2010) ‘The impact of a workplace catering initiative on dietary intakes of salt and other nutrients: a pilot study’. Public Health Nutrition, :1-51. · Gibney, SM; Gosselin, RD; Dinan, TG; Cryan, JF (2010) ‘Colorectal distension-induced prefrontal cortex activation in the Wistar-Kyoto rat: implications for irritable bowel syndrome’. Neuroscience, 165 (3):675-683. · Gosselin, RD; O’Connor, RM; Tramullas, M; Julio-Pieper, M; Dinan, TG; Cryan, JF (2010) ‘Riluzole Normalizes Early-Life Stress-Induced Visceral Hypersensitivity in Rats: Role of Spinal Glutamate Reuptake Mechanisms’. Gastroenterology, 138:2418-2425. · Harrington, J; Perry, IJ; Lutomski, J; Fitzgerald, AP; Shiely, F; McGee, H; Barry, MM; Van Lente, E; Morgan, K; Shelley, E (2010) ‘Living longer and feeling better: healthy lifestyle, self-rated health, obesity and depression in Ireland’. European Journal of Public Health, 20:91-95. · Hartigan, I; Cooke, J; Barry, P; O’Connor, M; O’Mahony, D (2010) ‘The incidence of acute stroke emergency admissions in an Irish teaching hospital’. Irish Journal of Medical Science, 179:67-71. · Hartigan, I; O’Mahony, D (2009) ‘The Barthel Index: comparing inter-rater reliability between Nurses and Doctors in an older adult rehabilitation unit’. Applied Nursing Research, Jan. · Hil,l TR; Cotter, AA; Mitchell, S; Boreham, CA; Dubitzky, W; Murray, L; Strain, JJ; Flynn, A; Robson, PJ; Wallace, JM; Kiely, M; Cashman, KD (2010) ‘Vitamin D status and parathyroid hormone relationship in adolescents and its association with bone health parameters: analysis of the Northern Ireland Young Heart’s Project’. Osteoporosis international: a journal established as result of cooperation between the European Foundation for Osteoporosis and the National Osteoporosis Foundation of the USA, 21 (4):695-700. · Horgan, M; O’Sullivan, O; Coffey, A; itzgerald, GF; van Sinderen, D; McAuliffe, O; Ross, RP (2010) ‘Genome analysis of the Clostridium difficile phage Phi CD6356, a temperate phage of the Siphoviridae family’. Gene, 462:34-43. · Kaleta, P; O’Callaghan, J; Fitzgerald, GF; Beresford, TP; Ross, RP (2010) ‘Crucial Role for Insertion Sequence Elements in Lactobacillus helveticus Evolution as Revealed by Interstrain Genomic Comparison’. Applied and environmental microbiology, 76:212-220. · Kelly, Orlaith; Craig, Orla; Shanahan, Fergus (2009) ‘A Case of Herpes and Candidal Esophagitis: The Diagnostic Importance of Endoscopy in Odynophagia and Fever’. American Journal of Gastroenterology, 104 (Suppl. 3). · Keohane, John; O’Mahony, Caitlin; O’Mahony, Liam; O’Mahony, Siobhan; Quigley, Eamonn M; Shanahan, Fergus (2010) ‘Irritable Bowel Syndrome-Type Symptoms in Patients With Inflammatory Bowel Disease: A Real Association or Reflection of Occult Inflammation?’. American Journal of Gastroenterology, 105 (8):1789-1794. · Klostermann, K; Crispie, F; Flynn, J; Meaney, WJ; Ross, RP; Hill, C (2010) ‘Efficacy of a teat dip containing the bacteriocin lacticin 3147 to eliminate Gram-positive pathogens associated with bovine mastitis’. The Journal of dairy research, 77:231-238. · Levav-Rabkin, T; Melamed, O; Clarke, G; Farber, M; Cryan, JF; Dinan, TG; Grossman, Y; Golan, HM (2010) ‘A Sensitive Period of Mice Inhibitory System to Neonatal GABA Enhancement by Vigabatrin is Brain Region Dependent’. Psychopharmacology, 35:1138-1154. · Levav-Rabkin, T; Melamed, O; Clarke, G; Farber, M; Cryan, JF; Dinan, TG; Grossman, Y; Golan, HM (2010) ‘A sensitive period of mice inhibitory system to neonatal GABA enhancement by vigabatrin is brain region dependent’. Psychopharmacology, 35 (5):1138-1154. · Lyons, A; O’Mahony, D; O’Brien, F; MacSharry, J; Sheil, B; Ceddia, M; Russell, WM; Forsythe, P; Bienenstock, J; Kiely, B; Shanahan, F; O’Mahony, L (2010) ‘Bacterial strain-specific induction of Foxp3+T regulatory cells is protective in murine allergy models’. Allergy, 40:811-819. 203
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Foreword<br />
UCC at a Glance<br />
Academic Developments<br />
Teaching and Learning<br />
Research<br />
<strong>College</strong> Reports:<br />
Arts, Celtic<br />
Studies and Social<br />
Sciences<br />
Business and Law<br />
Medicine and Health<br />
Science, Engineering and<br />
Food Science<br />
Events<br />
Student Experience<br />
Sports and Recreation<br />
Buildings and Estates<br />
<strong>Cork</strong> <strong>University</strong> Press<br />
Finance<br />
Governing Body<br />
IRIS Appendix<br />
203<br />
Institutional Research<br />
Information System<br />
CLICK HERE<br />
to return to the<br />
President’s Report<br />
· Flynn, A; Hirvonen, T; Mensink; GB, Ocke, MC; Serra-Majem, L; Stos, K; Szponar, L; Tetens, I; Turrini, A; Fletcher, R;<br />
Wildemann, T (<strong>2009</strong>) ‘Intake of selected nutrients from foods, from fortification and from supplements in various European<br />
countries’. Food & nutrition research, 53 (Suppl 1):1-51.<br />
· Geaney, F.,Harrington, J.,Fitzgerald, A. P.,Perry, I. J. (<strong>2010</strong>) ‘The impact of a workplace catering initiative on dietary intakes of<br />
salt and other nutrients: a pilot study’. Public Health Nutrition, :1-51.<br />
· Gibney, SM; Gosselin, RD; Dinan, TG; Cryan, JF (<strong>2010</strong>) ‘Colorectal distension-induced prefrontal cortex activation in the<br />
Wistar-Kyoto rat: implications for irritable bowel syndrome’. Neuroscience, 165 (3):675-683.<br />
· Gosselin, RD; O’Connor, RM; Tramullas, M; Julio-Pieper, M; Dinan, TG; Cryan, JF (<strong>2010</strong>) ‘Riluzole Normalizes Early-Life<br />
Stress-Induced Visceral Hypersensitivity in Rats: Role of Spinal Glutamate Reuptake Mechanisms’. Gastroenterology,<br />
138:2418-2425.<br />
· Harrington, J; Perry, IJ; Lutomski, J; Fitzgerald, AP; Shiely, F; McGee, H; Barry, MM; Van Lente, E; Morgan, K; Shelley, E<br />
(<strong>2010</strong>) ‘Living longer and feeling better: healthy lifestyle, self-rated health, obesity and depression in Ireland’. European<br />
Journal of Public Health, 20:91-95.<br />
· Hartigan, I; Cooke, J; Barry, P; O’Connor, M; O’Mahony, D (<strong>2010</strong>) ‘The incidence of acute stroke emergency admissions in<br />
an Irish teaching hospital’. Irish Journal of Medical Science, 179:67-71.<br />
· Hartigan, I; O’Mahony, D (<strong>2009</strong>) ‘The Barthel Index: comparing inter-rater reliability between Nurses and Doctors in an older<br />
adult rehabilitation unit’. Applied Nursing Research, Jan.<br />
· Hil,l TR; Cotter, AA; Mitchell, S; Boreham, CA; Dubitzky, W; Murray, L; Strain, JJ; Flynn, A; Robson, PJ; Wallace, JM; Kiely,<br />
M; Cashman, KD (<strong>2010</strong>) ‘Vitamin D status and parathyroid hormone relationship in adolescents and its association with<br />
bone health parameters: analysis of the Northern Ireland Young Heart’s Project’. Osteoporosis international: a journal<br />
established as result of cooperation between the European Foundation for Osteoporosis and the National Osteoporosis<br />
Foundation of the USA, 21 (4):695-700.<br />
· Horgan, M; O’Sullivan, O; Coffey, A; itzgerald, GF; van Sinderen, D; McAuliffe, O; Ross, RP (<strong>2010</strong>) ‘Genome analysis of the<br />
Clostridium difficile phage Phi CD6356, a temperate phage of the Siphoviridae family’. Gene, 462:34-43.<br />
· Kaleta, P; O’Callaghan, J; Fitzgerald, GF; Beresford, TP; Ross, RP (<strong>2010</strong>) ‘Crucial Role for Insertion Sequence Elements in<br />
Lactobacillus helveticus Evolution as Revealed by Interstrain Genomic Comparison’. Applied and environmental<br />
microbiology, 76:212-220.<br />
· Kelly, Orlaith; Craig, Orla; Shanahan, Fergus (<strong>2009</strong>) ‘A Case of Herpes and Candidal Esophagitis: The Diagnostic<br />
Importance of Endoscopy in Odynophagia and Fever’. American Journal of Gastroenterology, 104 (Suppl. 3).<br />
· Keohane, John; O’Mahony, Caitlin; O’Mahony, Liam; O’Mahony, Siobhan; Quigley, Eamonn M; Shanahan, Fergus (<strong>2010</strong>)<br />
‘Irritable Bowel Syndrome-Type Symptoms in Patients With Inflammatory Bowel Disease: A Real Association or Reflection of<br />
Occult Inflammation?’. American Journal of Gastroenterology, 105 (8):1789-1794.<br />
· Klostermann, K; Crispie, F; Flynn, J; Meaney, WJ; Ross, RP; Hill, C (<strong>2010</strong>) ‘Efficacy of a teat dip containing the bacteriocin<br />
lacticin 3147 to eliminate Gram-positive pathogens associated with bovine mastitis’. The Journal of dairy research,<br />
77:231-238.<br />
· Levav-Rabkin, T; Melamed, O; Clarke, G; Farber, M; Cryan, JF; Dinan, TG; Grossman, Y; Golan, HM (<strong>2010</strong>) ‘A Sensitive<br />
Period of Mice Inhibitory System to Neonatal GABA Enhancement by Vigabatrin is Brain Region Dependent’.<br />
Psychopharmacology, 35:1138-1154.<br />
· Levav-Rabkin, T; Melamed, O; Clarke, G; Farber, M; Cryan, JF; Dinan, TG; Grossman, Y; Golan, HM (<strong>2010</strong>) ‘A sensitive<br />
period of mice inhibitory system to neonatal GABA enhancement by vigabatrin is brain region dependent’.<br />
Psychopharmacology, 35 (5):1138-1154.<br />
· Lyons, A; O’Mahony, D; O’Brien, F; MacSharry, J; Sheil, B; Ceddia, M; Russell, WM; Forsythe, P; Bienenstock, J; Kiely, B;<br />
Shanahan, F; O’Mahony, L (<strong>2010</strong>) ‘Bacterial strain-specific induction of Foxp3+T regulatory cells is protective in murine<br />
allergy models’. Allergy, 40:811-819.<br />
203