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MacroModel Quick Start Guide - ISP

MacroModel Quick Start Guide - ISP

MacroModel Quick Start Guide - ISP

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Chapter 2: Using MaestroFigure 2.1. The Import panel.You can also open the Import panel by choosing Project > Import Structures in the mainwindow or by choosing Table > Import > Structures in the Project Table panel.4. Choose PDB from the Files of type option menu.5. Select 1err.pdb from the list of files.6. Click Open.The Import panel closes, and a warning dialog box appears, but it isn’t critical for thisexercise. Click OK.When Maestro imports a PDB file, problematic parts of imported structures, such as non-standardfunctional groups, are colored orange, red, green, or blue. For this exercise, it is not necessaryto correct the protein structure. However, when you begin to work on other proteins, youmay want to investigate and manually adjust marked portions. See Section 3.1.4 of the MaestroUser Manual for more information.6<strong>MacroModel</strong> 9.7 <strong>Quick</strong> <strong>Start</strong> <strong>Guide</strong>

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