Package 'ChIPpeakAnno' - Bioconductor

40 TSS.zebrafish.Zv8FormatDetailsRangedData with slot start holding the start position of the gene, slot end holding the end position ofthe gene, slot rownames holding ensembl gene id and slot space holding the chromosome locationwhere the gene is located. In addition, the following variables are included.strand 1 for positive strand and -1 for negative stranddescription description of the geneAnnotation data obtained by:mart = useMart(biomart = "ensembl", dataset = "rnorvegicus_gene_ensembl")getAnnotation(mart, featureType = "TSS")Examplesdata(TSS.rat.Rnor_5.0)slotNames(TSS.rat.Rnor_5.0)TSS.zebrafish.Zv8TSS annotation data for zebrafish (Zv8) obtained from biomaRtDescriptionUsageFormatDetailsTSS annotation data for zebrafish (Zv8) obtained from biomaRtdata(TSS.zebrafish.Zv8)RangedData with slot start holding the start position of the gene, slot end holding the end position ofthe gene, slot rownames holding ensembl gene id and slot space holding the chromosome locationwhere the gene is located. In addition, the following variables are included.strand 1 for positive strand and -1 for negative stranddescription description of the geneAnnotation data obtained by:mart = useMart(biomart = "ensembl", dataset = "drerio_gene_ensembl")getAnnotation(mart, featureType = "TSS")Examplesdata(TSS.zebrafish.Zv8)slotNames(TSS.zebrafish.Zv8)