Abstracts - Deutsche Zoologische Gesellschaft

Abstracts - Deutsche Zoologische Gesellschaft Abstracts - Deutsche Zoologische Gesellschaft

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10.07.2015 Views

212 Zoological Systematics PostersP ZS.15 - ENTowards a global assessment of taxonomic needs and capacities: What taxonomists dowe need where?Swen Renner, Christoph HäuserStaatliches Museum für Naturkunde, StuttgartThe Global Taxonomic Initiative (GTI) is a cross-cutting theme of the UN Convention on BiologicalDiversity (CBD), and has asked in 2002 for national, regional and global assessments of taxonomicneeds and capacities (UNEP/CBD/COP6/Decision VI/8). Whereas several national and regional assessmentsof taxonomic needs and capacities have already been compiled, a global assessment isstill pending. As an important contribution for a global assessment, information about the currentstate of knowledge of national biodiversity and available taxonomic capacities is being compiled.The German GTI National Focal Point contributes to the global assessment by analyzing numbersof existing vs. needed taxonomists, and by assessing the species numbers per taxonomic group andcountry. The preliminary results indicate, not surprisingly, that existing taxonomic knowledge andresources are distributed unequally among countries and taxonomic groups. Whereas numbers oftaxonomists and the relative states of knowledge about their countries’ biodiversity are positivelycorrelated, numbers of taxonomists negatively correlate with the known or estimated species richnessper country. Especially tropical regions of Africa need more taxonomic expertise, as well asmany parts of SE Asia. Moreover, the state of knowledge of certain “unpopular” and not especiallyprominent groups such as micro-organisms, algae, fungi, and several invertebrate groups is regionallyas well as globally poor.P ZS.16 - EN454 pyrosequencing: large-scale phylogenomic approach of the scorpion PandinusimperatorFalko Roeding 1 , Michael Kube 2 , Richard Reinhardt 2 , Thorsten Burmester 11University of Hamburg; 2 Max Planck Institute for Molecular Genetics, BerlinThe utility of Expressed Sequence Tags (ESTs) for phylogenetic analyses has been shown, but commonlyused capillary electrophoresis sequencing techniques limit the throughput. An alternative,recently developed low-cost technique of emulsion DNA amplification and parallel pyrosequencing,increases the amount of raw data considerably. We present the results of an EST sequencing projectincluding the phylogenetic position of the Common Emporer Scorpion (Scorpionidae), a speciesfor which virtually no sequence data is available so far. The project yields in 439.432 sequencesassembled into 6.486 contigs and 160.207 singletons. A large number of sequences with orthologsin model organisms (identified via an extended BLAST search) shows the efficiency of this newtechnique and its potential use for large-scale phylogentic analyses.

Zoological Systematics Posters 213P ZS.17 - ENNew SINEs for pinniped phylogenyChristiane Schröder 1 , Stefanie Hartmann 2 , Christoph Bleidorn 1 , Ralph Tiedemann 11Evolutionary Biology/Zoology, Institute of Biochemistry and Biology, University of Potsdam, 2Bioinformatics, Institute of Biochemistry and Biology, University of PotsdamWhile the monophyly of the pinnipeds and the differentiation between phocids and otariids is wellestablished, the placement of the walrus within the pinnipeds is continuously under debate. Amongthe discussed hypotheses, the walrusses have been considered to (1) represent the sister group to theotariids, (2) group within the family Otariidae, (3) constitute the sister group to the phocids, or (4)represent a taxon within the phocids. So far, sequence based phylogenies could not unambiguouslyresolve this issue. Short interspersed elements (SINEs) have been proposed as an essentially homoplasy-freephylogenetic character. Their subsequent use has been however limited due to the difficultyto establish SINE loci in non-model organisms. Making use of available genomic resources,we screened complete genomes of two carnivores (cat and dog) for SINE containing introns, usingbioinformatic methods. By PCR and sequencing, we assessed absence/presence of these SINEs ina representative carnivoran taxon set. We discuss implications of our new data for pinniped phylogeny.P ZS.18 - ENThe DNA Bank Network GermanyThomas Knebelsberger 1 , Birgit Gemeinholzer 2 , Gerhard Haszprunar 1 , Hans-Peter Klenk 3 , IsabellaStöger 1 , Johann-Wolfgang Wägele 41Zoologische Staatssammlung München; 2 Botanischer Garten und Botanisches Museum Berlin-Dahlem; 3 Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Braunschweig; 4Zoologisches Forschungsinstitut und Museum Alexander Koenig, BonnThe German Science Foundation (DFG) supports a national DNA Bank Network (www.dnabanknetwork.org)as service facility for research in the life sciences. Four partner institutions with complementaryexpertise are included: the Bavarian State Collection of Zoology Munich (ZSM), theBotanic Garden and Botanical Museum Berlin-Dahlem (BGBM), the Forschungsmuseum AlexanderKoenig Bonn (ZFMK), and the German Collection of Microorganisms and Cell Cultures Braunschweig(DSMZ). The main focus of the network is to enhance taxonomic, systematic, genetic, andevolutionary studies by providing: (1) at-cost availability of DNA material to extend and complementprevious studies. (2) high quality (-80°C) long-term storage of DNA material to allow for theverification and addition of data. (3) full documentation of each sample. The deposition of DNAsamples at the DNA Banks of the four partner institutions is free of charge under the warranty of afull documentation of each sample. This includes the provenance of the original material, the placeof voucher deposit and DNA quality and extraction information. The donors of DNA samples areguaranteed free access to their samples and the possibility to block the release of the DNA to otherscientists for a limited period of time. Depositing DNA material should become common practicefor any scientist conducting biological research following the “Proposals for safeguarding goodscientific practice” by the DFG.

Zoological Systematics Posters 213P ZS.17 - ENNew SINEs for pinniped phylogenyChristiane Schröder 1 , Stefanie Hartmann 2 , Christoph Bleidorn 1 , Ralph Tiedemann 11Evolutionary Biology/Zoology, Institute of Biochemistry and Biology, University of Potsdam, 2Bioinformatics, Institute of Biochemistry and Biology, University of PotsdamWhile the monophyly of the pinnipeds and the differentiation between phocids and otariids is wellestablished, the placement of the walrus within the pinnipeds is continuously under debate. Amongthe discussed hypotheses, the walrusses have been considered to (1) represent the sister group to theotariids, (2) group within the family Otariidae, (3) constitute the sister group to the phocids, or (4)represent a taxon within the phocids. So far, sequence based phylogenies could not unambiguouslyresolve this issue. Short interspersed elements (SINEs) have been proposed as an essentially homoplasy-freephylogenetic character. Their subsequent use has been however limited due to the difficultyto establish SINE loci in non-model organisms. Making use of available genomic resources,we screened complete genomes of two carnivores (cat and dog) for SINE containing introns, usingbioinformatic methods. By PCR and sequencing, we assessed absence/presence of these SINEs ina representative carnivoran taxon set. We discuss implications of our new data for pinniped phylogeny.P ZS.18 - ENThe DNA Bank Network GermanyThomas Knebelsberger 1 , Birgit Gemeinholzer 2 , Gerhard Haszprunar 1 , Hans-Peter Klenk 3 , IsabellaStöger 1 , Johann-Wolfgang Wägele 41<strong>Zoologische</strong> Staatssammlung München; 2 Botanischer Garten und Botanisches Museum Berlin-Dahlem; 3 <strong>Deutsche</strong> Sammlung von Mikroorganismen und Zellkulturen GmbH, Braunschweig; 4<strong>Zoologische</strong>s Forschungsinstitut und Museum Alexander Koenig, BonnThe German Science Foundation (DFG) supports a national DNA Bank Network (www.dnabanknetwork.org)as service facility for research in the life sciences. Four partner institutions with complementaryexpertise are included: the Bavarian State Collection of Zoology Munich (ZSM), theBotanic Garden and Botanical Museum Berlin-Dahlem (BGBM), the Forschungsmuseum AlexanderKoenig Bonn (ZFMK), and the German Collection of Microorganisms and Cell Cultures Braunschweig(DSMZ). The main focus of the network is to enhance taxonomic, systematic, genetic, andevolutionary studies by providing: (1) at-cost availability of DNA material to extend and complementprevious studies. (2) high quality (-80°C) long-term storage of DNA material to allow for theverification and addition of data. (3) full documentation of each sample. The deposition of DNAsamples at the DNA Banks of the four partner institutions is free of charge under the warranty of afull documentation of each sample. This includes the provenance of the original material, the placeof voucher deposit and DNA quality and extraction information. The donors of DNA samples areguaranteed free access to their samples and the possibility to block the release of the DNA to otherscientists for a limited period of time. Depositing DNA material should become common practicefor any scientist conducting biological research following the “Proposals for safeguarding goodscientific practice” by the DFG.

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