DNA Evidence - Mercyhurst Archaeological Institute

DNA Evidence
The topic of DNA is so thoroughly linked to forensic science, that it is assumed in almost every violent
crimes case. A reflection of its ubiquity may be that this section of the bibliography contains the largest number of
citations. This section primarily addresses human DNA; however; plant and non-human animal DNA are
increasingly playing part in criminal investigations. Conservation Agents often use DNA to solve pouching cases,
and plant DNA has been used to identify or link illicit drug evidence such as marijuana to scenes and suspects.
This is perhaps the single most cross-referenced category of the bibliography. One can understand why
since almost every material at a crime scene may hold viable DNA evidence as a substrate or questioned sample.
For example the soil in a grave from which a body was moved could contain decompitus bearing the victim's DNA;
the thorns of a bush which scratched a subject while he disposed of a body could bear his DNA; biting insects have
been found to contain viable amounts of DNA related to victims or suspects; and firearms might hold the DNA from
the individuaul how gripped the gun while the barrel contains victim blood or tissue blown back toward the gun and
suspect. This category also includes references which are, or could be included in that of Geoarchaeology and Soil
Science or Excavation and Recovery Strategies. Many examples, such as Burger (2002) or Stone and Stoneking
(1999) discuss the identification of ancient DNA in spite of the burial of the substrates or their exposure to the
elements.
The refinement of DNA technology continues to require smaller and smaller amounts of material for
examination. Likewise, age and contamination issues are addressed in many citations. Proper collection techniques
are not only topics of some references below but also in general crime scene investigation references contained in
General Crime Scene and Death Scene Investigation Topics.
(3532 citations)
Aasen, E., and J.F. Medrano
1990 Amplification of the ZFY and ZFX Genes for Sex Identification in Humans, Cattle, Sheep and Goats. Biotechnology, 8(12):1279-1281.
Abaz, J., S.J. Walsh, J.M. Curran D.S. Moss, J. Cullen, J. Bright, Et Al.
2002 Comparison of the Variables Affecting the Recovery of DNA from Common Drinking Containers. Forensic Science International,
126(3):233-240.
Abbott, A.
2003 Anthropologists Cast Doubt on Human DNA Evidence. Nature, 423:468.
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Abrahamson, S.
2002 Using DNA to Solve Cold Cases. Commission Report NCJ 194197. National Institute of Justice, Washington, D.C.
Abrams, E.S., S.E. Murdaugh, and L.S. Lerman
1990 Comprehensive Detection of Single Base Changes in Human Genomic DNA Using Denaturing Gradient Gel Electrophoresis and a GC Clamp.
Genomics, 7(4):463-75.
Abrams, A. Reusse, A. Ward, and J. Lacapra
2008 A Simulated Arson Experiment and Its Effect on the Recovery of DNA. Canadian Society of Forensic Sciences Journal, 41:53-60.
Aboud, Maurice J.
2009 A Rapid Penta STR Screening Method by Microchip Capillary Electrophoresis. A Poster Presentation before the 61 st Annual Meeting
of the Academy of Forensic Sciences, February 16-21, Denver, Colorado
Abu Al-Soud, W., L.J. Jönsson, and P. Rådström
2000 Identification and Characterization of Immunoglobulin G in Blood as a Major Inhibitor of Diagnostic PCR. Journal of Clinical Microbiology,
38(1):345-350.
Abu, Al-Soud, W., and P. Radstrom
1998 Capacity of Nine Thermosable DNA Polymerases to Mediate DNA Amplification in the Presence of PCR-Inhibiting Samples. Appl Environ
Microbiol, 64(10):3748-3753.
Ada, G.L.
1977 The Potential Hazardsof Recombinant DNA Research: Their Assessment and Management. Australian Journal of Forensic Sciences, 9(3):93-97.
1985 Some Current and Future Developments in Biology Using Recombinant DNA Technology. Australian Journal of Forensic Sciences, 17(3):84-93.
Adachi, Noboru, Kazuo Umetsu, Wataru Takigawa, and Kazuhiro Sakaue
2004 Phylogenetic Analysis of the Human Ancient Mitochondrial DNA. Journal of Archaeological Science, 31(10): 1339-1348.
Adams, D.E., L.A. Presley, A.L. Baumstark, K.W. Hensley, P.A. Campbell, C.M. McLaughlin, B. Budowle, A.M. Giusti, J.B. Smerick, and F.S.
Baechtel
1991 Deoxyribonucleic Acid (DNA) Analysis by Restriction Fragment Length Polymorphisms of Blood and Other Body Fluid Stains
Subjected to Contamination and Environmental Insults. Journal of Forensic Sciences, 36(5):1284-1298.
Adams, Tiffany
2010 DNA Laboratory Bailout: No-Cost Methods for Improving Productivity. A Poster Presentation before the 62nd Annual Scientific
Meeting of the American Academy of Forensic Sciences (Advance Program), February 22-27, Seattle, Washington.
Adcock, G.J., and A. Thorne
2001 Mitochondrial DNA Sequences in Ancient Australians: Implications for Modern Human Origins. Proceedings of the National Academy of
Sciences, 98:537-542.
Adderley, R., and J.W. Bond
2008 The Effects of Deprivation on the Time Spent Examining Crime Scenes and the Recovery of DNA and Fingerprints. Journal of
Forensic Sciences, 53(1):178-192.
Ago, Kazutoshi, Mihoko Ago, Shiro Nakagawa, and Mamoru Ogata
2005 Gender-Specific Amplification of Japanese Macaque Genes Using Primers for the Human DYS391 and DYS438 Loci. Legal Medicine, 7(3):190-
193.
Ago, Kazutoshi, Yoshiyuki Orihara, Miholo Ago, Shiro Nakagawa, and Mamoru Ogata
2004 Evaluation of the Species Specifically for Six Human Short Tandem Repeat Loci CSF1PO, TPOX, TH01, F13A01, FESFPS, and vWA, in the
Japanese Macaque. Legal Medicine, 6(2):63-142.
Ago, Kazutoshi, Isao Yuasa, Kazuo Umetsu, Mihoko Ago, and Mamoru Ogata
2000 Y-Chromosomal STR Haplotyping in a Japanese Population. Legal Medicine, 2(3):163-165.
Aguilar, Arturo J., Kimberly C. Clabaugh, Anthony Carter, Sudhir K. Sinha, and Steven B. Lee
2008 Development of a Y Alu DNA Screening Assay Using Y Alu Derived Sequence for Detection on the FMBIO III Plus. A Presentation
before the 60th Anniversary Meeting of the American Academy of Forensic Sciences, February 18-23, Washington, D.C.
Ahmad, Taha, Amy B. McGuckian, Julie Conover Sikorsky, Cecelia A. Crouse, and Russell W. Miller
2009 Biomatrica DNA SampleMatrix® - A New Prospect for Forensic DNA Sample Storage. A Poster Presentation before the 61 st Annual
Meeting of the Academy of Forensic Sciences, February 16-21, Denver, Colorado
Akane, A., K. Matsubara, H. Nakamura, S. Takahashi, and K. Kimura
1994 Identification of the Heme Compound Copurified with Deoxyribonucleic Acid (DNA) from Bloodstains, a Major Inhibitor of
Polymerase Chain Reaction (PCR) Amplification. Journal of Forensic Sciences, 39(2):362-372. (also cited as Volume 34)
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Akane, A., K. Matsubara, H. Shiono, I. Yuasa, S.-I. Yokota, M. Yamada, and Y. Nakagome
1990 Paternity Testing: Blood Group Systems and DNA Analysis by Variable Number of Tandem Repeat Markers. Journal of Forensic Sciences,
35(5):1217-1225.
Akane, A., S. Seki, H. Shiono, H. Nakamura, M. Hasegawa, M. Kagawa, et al.
1992 Sex Determination of Forensic Samples by Dural PCR Amplification of an X-Y Homologous Gene. Forensic Science International,
52:143-148.
Akane, A., H. Shiono, K. Matsubara, Y. Nakahori, S. Seki, S. Nagafuchi, M. Yamada, and Y. Nakagome
1991 Sex Identification of Forensic Specimens by Polymerase Chain Reaction (PCR): Two Alternative Methods. Forensic Science International,
49:81-88.
Akane, A., H. Shiono, K. Matsubara, H. Nakamura, M. Hasegawa, and M. Kagawa
1993 Purification of Forensic Specimens for the Polymerase Chain Reaction (PCR) Analysis. Journal of Forensic Sciences, 38(3):691-701.
Akane, A., S. Yoshimura, M. Yoshida, Y. Okii, T. Watabiki, K. Matsubara, and K. Kimura
1996 ABO Genotyping Following a Single PCR Ampification. Journal of Forensic Sciences, 41(2):
Akbari, M., M.D. Hansen, J. Halgunset, F. Skorpen, and H.E. Krokan
2005 Low Copy Number DNA Template Can Render Polymerase Chain Reaction Error Prone in a Sequence-Dependent Manner. J. Mol Diagn,
7(1):36-39.
Akiyama, Katsunori, and Makoto Nogami
2003 Analysis of the Polymorphic Structure of Short Tandem Repeats Locus D18S555. Legal Medicine, 5(1):55-59.
Akiyama, Katsunori, and Tomio Yoshii, and Makoto Nogami
2002 Analysis of the Polymorphic Structure of the D7S808-Short Tandem Repeat (STR). Legal Medicine, 4(3):178-181.
Alakoç, Yeşim Doğan, and Penbe Sema Aka
2009 “Orthograde Entrance Technique” to Recover DNA from Ancient Teeth Preserving the Physical Structure. Forensic Science International,
188(1):96-98.
Alam, S., S.R. Brailsford, R.A. Whiley, and D. Beighton
PCR-based Methods for Genotyping Viridans Group Streptococci. Journal of Clinical Microbiology, 37:2772-2776.
Albaz, J., S.J. Walsh, J.M. Curran, D.S. Moss, J. Cullen, J.-A. Bright, et al.
2002 Comparison of Variables Affecting the Recovery of DNA from Common Drinking Containers. Forensic Science International, 126:233-240.
Albert, J., J. Wahlberg, and M. Uhlen
1993 Forensic Evidence by DNA Sequencing. Nature, 361:595-596.
Alcamo, Edward I.
2000 DNA Technology, Awesome Skill, Second Edition. Academic Press, San Diego, CA.
(ISBN: 0120489201)
Alenizi, Mohammad A., William Goodwin, Sibte hadi, Homod H. Alenizi, Khaleda A. Altamar, and Mona S. Alsikel
2009 Concordance Between the AmpFℓSTR® MiniFiler and AmpFℓSTR® Identifiler® PCR Amplification Kits in the Kuwaiti Population. Journal
of Forensic Sciences, 54(2):350-352.
Aler, M., P. Sánchez-Diz, I. Gomes, M. Gisbert, A. Carracedo, A. Amorim, and L. Gusmão
2007 Genetic Data of 10 X-STRs in a Spanish Population Sample. Forensic Science International, 173(2-3):193-196.
Alessandrini, Federica, Monia Cecati, Mauro Pesaresi, Chiara Turchi, Flavia Carle, and Adriano Tagliabracci
2003 Fingerprints as Evidence for a Genetic Profile: Morphological Study on Fingerprints and Analysis of Exogenous and Individual
Factors Affecting DNA Typing. Journal of Forensic Sciences, 48(3):586-592.
Alford, R.L., and C.T. Caskey
1994 DNA Analysis in Forensics, Disease, and Animal/Plant Identification. Current Opinions in Biotechnology, 5(1):29-33.
Allard, M.W., K. Miller, M. Wilson, K. Monson, and B. Budowle
2002 Characterization of the Caucasian Haplogroups Present in the SWGDAM Forensic mtDNA Dataset for 1771 Human Control Region Sequences.
Journal of Forensic Sciences, 47:1-9.
Allard, M.W., D. Polanskey, K. Miller, M.R. Wilson, K.L. Monson, and B. Budowle
2005 Characterization of Human Control Region Sequences of the African American SWGDAM Forensic mtDNA Data Set. Forensic Science
International, 148:169-179.
Allard, Marc W., Deborah Polanskey, Mark R. Wilson, Keith L. Monson, and Bruce Budowle
2006 Evaluation of Variation in Control Region Sequences for Hispanic Individuals in the SWGDAM mtDNA Data Set. Journal of
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Forensic Sciences, 51(3):566-575.
Allard, Marc W., Mark R. Wilson, Keith L. Monson, and Bruce Budowle
2004 Control Region Sequences for East Asian Individuals in the Scientific Working Group on DNA Analysis Methods Forensic mtDNA Data Set.
Legal Medicine, 6(1):11-24.
Allard, M.W., D. Young, and Y. Huyen
1995 Detecting Dinosaur DNA. Science, 268:1192.
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1998 Mitochondrial DNA Sequencing of Shed Hairs and Saliva on Robbery Caps: Sensitivity and Matching Probabilities. Journal of
Forensic Sciences, 43(3):453-464.
Allen, M. T. Saldeen, U. Pettersson, and U. Gyllensten
1993 Genetic Typing of HLA Class II Genes in Swedish Populations: Application to Forensic Analysis. Journal of Forensic Sciences, 38(3):554-570.
Allen, M., T. Saldeen, and U. Gyllensten
1994 PCR-Based DNA Typing of Saliva on Stamps and Envelopes. Biotechniques, 17(3):546-552.
1995 Allele-Specific Hla-Drb1 Amplification of Forensic Evidence Samples with Mixed Genotypes. Biotechniques, 19:454-463.
Allen, Melinda S., Elizabeth Matisoo-Smith, and Ann Horsburgh
2001 Pacific 'Babes': Issues in the Origins and Dispersal of Pacific Pigs and the Potential of Mitochondrial DNA Analysis. International Journal of
Osteoarchaeology, 11(1-2):4-13.
Allen, Robert W.
2009 Quantitation of Total and Male Chromosomal DNA Using Multiplex PCR and Capillary Electrophoresis. A Presentation before the
61 st Annual Meeting of the Academy of Forensic Sciences, February 16-21, Denver, Colorado.
Allen, R.W., and V.M. Fuller
2006 Quantitation of Human Genomic DNA Through Amplification of the Amelogenin Locus. Journal of Forensic Sciences, 51(1):76-81.
Allen, Robert W., Jill Pogemiller, Janice Joslin, Melisa Gulick, and Jane Pritchard
2008 Identification Through Typing of DNA Recovered from Touch Transfer Evidence: Parameters Affecting Yield of Recovered Human DNA.
Journal of Forensic Identification, 58(1):33-41.
Allor, Catherine, David D. Einum, and Marco Scarpetta
2005 Identification and Characterization of Variant Alleles at CODIS STR Loci. Journal of Forensic Sciences, 50(5):1128-1133.
Almer, Johanne, Roger Frappier, Andrew Greenfield, Cecilia Hageman, John M. Laird, and Jonathan Newman
2007 Organizational Structure and Service Delivery: Matching Analytical Capacity to the Deman for Forensic DNA. A Presentation before
the 59th Annual Meeting of the American Academy of Forensic Sciences, February 19-24, 2007, San Antonio, Texas.
Alonso, Antonio, Cristina Albarran, Pablo Martin, Pilar Garcia, Oscar Garcia, Concepcion de la Rua, Ainhoa Alzualde, Lourdes Fernandez de
Simon, Manuel Sancho, and Jose Fernandez Piqueras
2003 Multiplex PCR of Short Amplicons for mtDNA Sequencing from Ancient DNA. International Congress Series, 1239:585-588.
Alonso, Antonio, Š. Andelinovic, P. Martín, D. Sutlovic, I. Erceg, E. Huffine, L.F. deSimon, C. Albarran, M. Definis-Gojanovic, A. Fernandez-Rodriquez,
P. Garcia, L. Drmic, B. Rezie, S. Kuret, M. Sancho, and D. Primorac
2001 DNA Typing from Skeletal Remains: Evaluation of Multiplex and Megaplex STR Systems on DNA Isolated from Bone and Teeth
Samples. Croatian Medical Journal, 42(3):260-266.
Alonso, A., and P. Gascó
1987 The Use of Seperator Isoelectric Focusing in Micro-Ultrathin Polyacrylamide Gels in the Characterization of Some Polymorphic
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2004 A Real-Time PCR Protocol to Determine the Number of Amelogen (x-y) Gene Copies form Forensic DNA Samples. Methods Mol Biol, 297:31-
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2005 Challenges of DNA Profiling in Mass Disaster Investigations. Croation Medical Journal, 46(4):540-548.
Alonso, Antonio, Pablo Martin, Cristina Albarrán, Pilar Garcia, Ascar García, Lourdes Fernández de Simón, Julia García-Hirschfeld, Manuel
Sncho, Concepción de la Rúa and Jose Fernández-Piqueras
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2004 Real-Time PCR Designs to Estimate Nuclear and Mitochondrial DNA Copy Number in Forensic and Ancient DNA Studies. Forensic
Science International, 139(2-3):141-149.
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2004 Specific Quantification of Human Genomes from Low Copy Number DNA Samples in Forensic and Ancient DNA Studies. Croation
Medical Journal, 44:273-280.
Alonso, A., P. Martin, C. Albarran, O. Garcia, and DSL Fernandez
2004 Real-Time PCR Designs to Estimate Nuclear and Mitochondrial DNA Copy Number in Forensic and Ancient DNA Studies. Forensic
Science International, 139:141-149.
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2002 Results of the 1999-2000 Collaborative Exercise and Profeciency Testing Program on Mitochondrial DNA of the GEP-ISFG: An Inter-
Laboratory Study of the Observed Variability in the Heteroplasmy Level of Hair From the Same Donor. Forensic Science International, 125(1):1-
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1997 Gapped BLAST and PSI-BLAST: A New Generation of Protein Database Search Programs. Nucleic Acids Research, 25:3389-3402.
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1998 Capacity of Nine Thermostable DNA Polymerases to Mediate DNA Amplification in the Presence of PCR-Inhibiting Samples. Appl Environ
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2001 Purification and Characterization of PCR-Inibitory Components in Blood Cells. J Clin Microbiol, 39(2):485-493.
Altuncul, Havva, Ersi Abaci Kalfoglu, W. Eisenmenger, and Sevil Atasoy
2003 A Comparative Study in DNA Extraction from Skeletal Remains. Proceedings of the 3rd European Academy of Forensic Science
Meeting, September 22-27, Istanbul, Turkey. Forensic Science International, 136(Supplement 1):41.
Altuncul, Havva, Berzell Rolf, Ersi Abaci Kalfoglu, W. Eisenmenger, and Sevil Atasoy
2003 Maternity Estimation from Skeletal Remains: A Case Report. Proceedings of the 3rd European Academy of Forensic Science Meeting,
September 22-27, Istanbul, Turkey. Forensic Science International, 136(Supplement 1):62.
Alvarez, J. Carlos, Diana L.E. Johnson, Jose A. Lorente, Esther Marinez-Espin, Luis J. Martinez-Gonzalez, Marc Allard, Mark R. Wilson, and Bruce
Budowle
2007 Characterization of Human Control Region Sequences for Spanish Individuals in a Forensic mtDNA Data Set. Legal Medicine, 9(6):293-304.
Alvarez, Garcia A., I. Munoz, C. Pestoni, M.V. Lareu, M.S. Rodriguez-Calvo, and A. Carracedo
1996 Effect of Environmental Factors on PCR-DNA Analysis from Dental Pulp. International Journal of Legal Medicine, 109:125-129.
Alvarez, Michelle S., and Jack Ballantyne
2005 Age Determination: The Identification of Newborns Using Messenger RNA Profiling Analysis. A Presentation before the 57th Annual
Meeting of the American Academy of Forensic Sciences, February 21-26, 2005, New Orleans, Louisiana.
2006a Age Determination by RNA Profiling: Validation of a Newborn Child-Specific Real-Time PCR Assay. A Presentation before the
58th Annual Meeting of the American Academy of Forensic Sciences, February 20-25, Seattle, Washington.
2006b The Identification of Newborns Using Messenger RNA Profiling Analysis. Anal Biochem, 357(1):21-34.
Alvarez, M., J. Juusola, and J. Ballantyne
2004 An mRNA and DNA Co-Isolation Method for Forensic Casework Samples. Anal Biochem, 335(2):289-298.
Alves, Cintia, Verónica Gomes, maria João Prata, António Amorim, and Leonor Gusmão
2007 Population Data for Y-Chromosome Haplotypes Defined by 17 STRs (AmpFISTR YFiler) in Portugal. Forensic Science International,
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2001 VWA STR Genotyping: Further Inconsistencies Between Perkin-Elmer and Promega Kits. International Journal of Legal Medicine,
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2000 The Ancestry of Brazilian mtDNA Lineages. American Journal of Human Genetics, 67:444-461.
Amick, Janeice, Dale Bivins, Kerrie Cathcart, Lesley Hammer, and Turner Pippin
2004 Integrating DNA Collection into the Latent Print Section. Journal of Forensic Identification, 54(2):170-177.
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2004 Genotyping Inconsistencies and Null Alleles Using AmpFℓSTR® and Powerplex® 16 Kits. Progress in Forensic Genetics 10, Elsevier, New
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2005 Pros and Cons in the Use of SNPs in Forensic Kinship Investigation: A Comparative Analysis with STRs. Forensic Science
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2007 STR Typing of Ancient DNA Extracted from Hair Shafts of Siberian Mummies. Forensic Science International, 166(2-3):218-229.
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2003a Rapid Quantification and Sex Determination of Forensic Evidence Materials. Journal of Forensic Sciences, 48(6):1280-1287.
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2002 Real-Time DNA Quantification of Nuclear and Mitochondrial DNA in Forensic Analysis. Biotechniques, 33(2):402-411.
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2006 Quantification of mtDNA Mixtures in Forensic Evidence Material Using Pyrosequencing. International Journal of Legal Medicine, 120(6):383-
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Andreasson, H., M. Nilsson, B. Budowle, H. Lundberg, and M. Allen
2006 Nuclear and Mitochondrial DNA Quantification of Various Forensic Materials. Forensic Science International, 164:56-64.
Andreini, Emanuela, Sara Frison, Elena Longhi, Rosanna Torelli, Nicola De Fazio, and Francesca Poli
2007 Allele Frequencies for Nine STR Loci (Des1358, vWA, FGA, D8S1179, D21S11, D18S51, D5S818, D13S317, D7S820) in the Italian
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1999 Reanalysis and Revision of the Cambridge Reference Sequence for Human Mitochondrial DNA. Nature Genetics, 23:147.
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2005 Forensic Informativity of Domestic Dog mtDNA Control Region Sequences. Forensic Science International, 154(2-3):99-110.
Anguiano, Esperanza, Cynthia B. Smitherman, Phuong Nguyen, and Robert C. Giles
2008 A Comparison Study of Commonly Used Commercial STR Kits on Trace Evidence Samples. A presentation before the 60th
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1994 DNA Recommendations: 1994 Report Concerning Further Recommendations of the DNA Commission of the International Society of Forensic
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1999 DNA Detectives. Popular Science, 255(2):48.
2000a When One Man's DNA is Another Man's Exonerating Evidence: Compelling Consensual Sexual Partners of Rape Victims to Provide
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2003 Mother Invented DNA Evidence: A Complex Case of False Rape Allegation Including Mixed DNA and a Technical Artifact When
DNA-Typing. Proceedings of the 3rd European Academy of Forensic Science Meeting, September 22-27, Istanbul, Turkey. Forensic
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