redisposition of Phoma-like anamorphs in Pleosporales - CBS - KNAW
redisposition of Phoma-like anamorphs in Pleosporales - CBS - KNAW
redisposition of Phoma-like anamorphs in Pleosporales - CBS - KNAW
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Fig 2<br />
De Gruyter et al.<br />
A1<br />
A2<br />
A3<br />
A4<br />
53<br />
70<br />
51<br />
0.1<br />
100 <strong>CBS</strong> 121.89 Plenodomus agnitus comb. nov. Leptosphaeria agnita<br />
100 <strong>CBS</strong> 126584 Plenodomus agnitus comb. nov. Leptosphaeria agnita<br />
100<br />
<strong>CBS</strong> 414.62 Plenodomus fallaciosus comb. nov. Leptosphaeria fallaciosa<br />
99<br />
<strong>CBS</strong> 248.92 Plenodomus lup<strong>in</strong>i comb. nov. <strong>Phoma</strong> lup<strong>in</strong>i<br />
<strong>CBS</strong> 122783 Plenodomus visci comb. nov. Plectophomella visci<br />
83<br />
100 <strong>CBS</strong> 143.84 Plenodomus <strong>in</strong>fluorescens comb. nov. <strong>Phoma</strong> enteroleuca var. <strong>in</strong>fluorescens<br />
100 PD73.1382 Plenodomus <strong>in</strong>fluorescens comb. nov. <strong>Phoma</strong> enteroleuca var. <strong>in</strong>fluorescens<br />
100 <strong>CBS</strong> 381.67 Plenodomus l<strong>in</strong>dquistii comb. nov. Leptosphaeria l<strong>in</strong>dquistii<br />
<strong>CBS</strong> 386.80 Plenodomus l<strong>in</strong>dquistii comb. nov. Leptosphaeria l<strong>in</strong>dquistii<br />
<strong>CBS</strong> 120227 Plenodomus coll<strong>in</strong>soniae comb. nov. Leptosphaeria coll<strong>in</strong>soniae<br />
100 <strong>CBS</strong> 119951 Plenodomus biglobosus comb. nov. Leptosphaeria biglobosa<br />
<strong>CBS</strong> 127249 Plenodomus biglobosus comb. nov. Leptopshaeria biglobosa<br />
100 <strong>CBS</strong> 120119 Plenodomus wasabiae<br />
94 <strong>CBS</strong> 120120 Plenodomus wasabiae<br />
67<br />
<strong>CBS</strong> 101637 Plenodomus pimp<strong>in</strong>ellae comb. nov. Leptosphaeria pimp<strong>in</strong>ellae<br />
100<br />
<strong>CBS</strong> 539.63 Plenodomus chrysanthemi comb. nov. <strong>Phoma</strong> vas<strong>in</strong>fecta<br />
<strong>CBS</strong> 127250 Plenodomus tracheiphilus comb. nov. <strong>Phoma</strong> tracheiphila<br />
98<br />
<strong>CBS</strong> 551.93 Plenodomus tracheiphilus comb. nov. <strong>Phoma</strong> tracheiphila<br />
<strong>CBS</strong> 244.64 Plenodomus congestus comb. nov.Leptopshaeria congesta<br />
<strong>CBS</strong> 113795 Plenodomus libanotidis comb. nov. Leptosphaeria libanotis<br />
100<br />
100 <strong>CBS</strong> 260.94 Plenodomus l<strong>in</strong>gam Leptosphaeria maculans, <strong>Phoma</strong> l<strong>in</strong>gam<br />
<strong>CBS</strong> 275.63 Plenodomus l<strong>in</strong>gam Leptosphaeria maculans, <strong>Phoma</strong> l<strong>in</strong>gam<br />
94<br />
<strong>CBS</strong> 113702 Plenodomus hendersoniae comb. nov. Leptosphaeria hendersoniae<br />
<strong>CBS</strong> 139.78 Plenodomus hendersoniae comb. nov. Leptosphaeria hendersoniae<br />
<strong>CBS</strong> 375.64 Plenodomus confertus comb. nov. Leptosphaeria conferta<br />
100 <strong>CBS</strong>142.84 Plenodomus enteroleucus comb. nov. <strong>Phoma</strong> enteroleuca var. enteroleuca<br />
<strong>CBS</strong> 831.84 Plenodomus enteroleucus comb. nov. <strong>Phoma</strong> enteroleuca var. enteroleuca<br />
100 <strong>CBS</strong> 285.72 Subplenodomus apiicola comb. nov. <strong>Phoma</strong> apiicola<br />
<strong>CBS</strong> 504.91 Subplenodomus apiicola comb. nov. <strong>Phoma</strong> apiicola<br />
100 <strong>CBS</strong> 499.91 Subplenodomus valerianae comb. nov. <strong>Phoma</strong> valerianae<br />
<strong>CBS</strong> 630.68 Subplenodomus valerianae comb. nov. <strong>Phoma</strong> valerianae<br />
<strong>CBS</strong> 269.92 Subplenodomus drobnjacensis comb. nov. <strong>Phoma</strong> drobnjacensis<br />
<strong>CBS</strong> 270.92 Subplenodomus drobnjacensis comb. nov. <strong>Phoma</strong> drobnjacensis<br />
<strong>CBS</strong> 100272 Subplenodomus violicola comb. nov. <strong>Phoma</strong> violicola<br />
<strong>CBS</strong> 306.68 Subplenodomus violicola comb. nov. <strong>Phoma</strong> violicola<br />
<strong>CBS</strong> 114198 Paraleptosphaeria macrospora comb. nov. Leptosphaeria macrospora<br />
<strong>CBS</strong> 306.51 Paraleptosphaeria nitschkei comb. nov. Leptosphaeria nitschkei<br />
<strong>CBS</strong> 114591 Paraleptosphaeria praetermissa comb. nov. Leptosphaeria praetermissa<br />
<strong>CBS</strong> 643.86 Paraleptosphaeria dryadis comb. nov. Leptosphaeria dryadis<br />
<strong>CBS</strong> 101638 Paraleptosphaeria orobanches comb. nov. <strong>Phoma</strong> korfii<br />
100 <strong>CBS</strong> 115.96 Heterospora chenopodii comb. nov. <strong>Phoma</strong> heteromorphospora<br />
100 <strong>CBS</strong> 448.68 Heterospora chenopodii comb. nov. <strong>Phoma</strong> heteromorphospora<br />
<strong>CBS</strong> 165.78 Heterospora dimorphospora comb. nov. <strong>Phoma</strong> dimorphospora<br />
100 <strong>CBS</strong> 345.78 Heterospora dimorphospora comb. nov. <strong>Phoma</strong> dimorphospora<br />
91 <strong>CBS</strong> 145.84 Leptosphaeria veronicae comb. nov. <strong>Phoma</strong> veronicicola<br />
<strong>CBS</strong> 126583 Leptosphaeria veronicae comb. nov. <strong>Phoma</strong> veronicicola<br />
98<br />
<strong>CBS</strong> 505.75 Leptosphaeria doliolum<br />
82 <strong>CBS</strong> 125979 Leptosphaeria doliolum<br />
<strong>CBS</strong> 541.66 Leptosphaeria doliolum<br />
100 <strong>CBS</strong> 155.94 Leptosphaeria doliolum<br />
<strong>CBS</strong> 617.75 Leptosphaeria errabunda comb. nov.<br />
100<br />
<strong>CBS</strong> 125978 Leptosphaeria errabunda comb. nov.<br />
<strong>CBS</strong> 640.93 Leptosphaeria macrocapsa comb. nov. <strong>Phoma</strong> macrocapsa<br />
62 100<br />
<strong>CBS</strong> 385.80 Leptosphaeria sydowii comb. nov. <strong>Phoma</strong> sydowii<br />
100 <strong>CBS</strong> 125976 Leptosphaeria sydowii comb. nov. <strong>Phoma</strong> sydowii<br />
100 <strong>CBS</strong> 144.84 Leptosphaeria sclerotioides comb. nov. <strong>Phoma</strong> sclerotioides<br />
92 <strong>CBS</strong> 148.84 Leptosphaeria sclerotioides comb. nov. <strong>Phoma</strong> sclerotioides<br />
98 <strong>CBS</strong> 616.75 Leptosphaeria conoidea<br />
100<br />
100 <strong>CBS</strong> 125977 Leptosphaeria conoidea<br />
100 <strong>CBS</strong> 389.80 Leptosphaeria slovacica<br />
<strong>CBS</strong> 125975 Leptosphaeria slovacica<br />
100 <strong>CBS</strong> 390.80 Leptosphaeria pedicularis comb. nov. <strong>Phoma</strong> pedicularis<br />
<strong>CBS</strong> 126582 Leptosphaeria pedicularis comb. nov. <strong>Phoma</strong> pedicularis<br />
100 <strong>CBS</strong> 223.77 Leptosphaeria rubefaciens comb. nov. <strong>Phoma</strong> rubefaciens<br />
<strong>CBS</strong> 387.80 Leptosphaeria rubefaciens comb. nov. <strong>Phoma</strong> rubefaciens<br />
<strong>CBS</strong> 125980 Leptosphaeria etheridgei comb. nov. <strong>Phoma</strong> etheridgei<br />
92 IMI 217261 Coniothyrium dolichi comb. nov. Pyrenochaeta dolichi<br />
100 IMI 217262 Coniothyrium dolichi comb. nov. Pyrenochaeta dolichi<br />
IMI294986 Coniothyrium glyc<strong>in</strong>es comb. nov. <strong>Phoma</strong> glyc<strong>in</strong>icola<br />
100 IMI 124141 Coniothyrium glyc<strong>in</strong>es comb. nov. <strong>Phoma</strong> glyc<strong>in</strong>icola<br />
100 IMI 101633 Coniothyrium carteri comb. nov. <strong>Phoma</strong> carteri<br />
<strong>CBS</strong> 105.91 Coniothyrium carteri comb. nov. <strong>Phoma</strong> carteri<br />
<strong>CBS</strong> 400.71 Coniothyrium palmarum<br />
Coniothyriaceae (C)<br />
97 <strong>CBS</strong> 188.71 Coniothyrium telephii comb. nov. <strong>Phoma</strong> septicidalis<br />
100 <strong>CBS</strong> 856.97 Coniothyrium telephii comb. nov. <strong>Phoma</strong> septicidalis<br />
<strong>CBS</strong> 101636 Coniothyrium telephii comb. nov. <strong>Phoma</strong> septicidalis<br />
100 <strong>CBS</strong> 353.65 Coniothyrium multiporum comb. nov. <strong>Phoma</strong> multipora<br />
<strong>CBS</strong> 501.91 Coniothyrium multiporum comb. nov. <strong>Phoma</strong> multipora<br />
<strong>CBS</strong> 102202 Neophaeosphaeria filamentosa<br />
<strong>CBS</strong> 267.59 Pyrenochaeta lycopersici<br />
100 <strong>CBS</strong> 286.93 Pyrenochaetopsis pratorum comb. nov.<br />
100<br />
<strong>CBS</strong> 445.81 Pyrenochaetopsis pratorum comb. nov.<br />
<strong>CBS</strong> 101635 Pyrenochaetopsis leptospora<br />
<strong>CBS</strong> 257.68 Pyrenochaeta cava<br />
Cucurbitariaceae (D)<br />
<strong>CBS</strong> 363.93 Cucurbitaria berberidis<br />
<strong>CBS</strong> 407.76 Pyrenochaeta nobilis<br />
<strong>CBS</strong> 615.75 <strong>Phoma</strong> herbarum<br />
Didymellaceae (E)<br />
56<br />
61<br />
66<br />
71<br />
100<br />
77<br />
90<br />
91<br />
100<br />
100<br />
100<br />
99<br />
100<br />
87<br />
100<br />
64<br />
64<br />
99<br />
96<br />
Fig. 2. The phylogeny <strong>of</strong> <strong>Phoma</strong> section Plenodomus and Leptosphaeria, based on the strict consensus tree from a Bayesian analysis <strong>of</strong> 87 LSU/ITS sequences. The Bayesian<br />
posterior probabilities are given at the nodes. The tree was rooted to <strong>Phoma</strong> herbarum (<strong>CBS</strong> 615.75).<br />
Leptosphaeriaceae (A)<br />
Leptosphaeriaceae (B)<br />
14