Notes on Principal Component Analysis
Notes on Principal Component Analysis
Notes on Principal Component Analysis
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a two-dimensi<strong>on</strong>al Cartesian system where the horiz<strong>on</strong>tal axis corresp<strong>on</strong>ds<br />
to the first comp<strong>on</strong>ent and the vertical axis corresp<strong>on</strong>ds<br />
to the sec<strong>on</strong>d comp<strong>on</strong>ent. Use the n two-dimensi<strong>on</strong>al coordinates<br />
in (U n×2 D 2×2 ) n×2 to plot the rows (subjects), let V p×2 define the<br />
two-dimensi<strong>on</strong>al coordinates for the p variables in this same space.<br />
As in any biplot, if a vector is drawn from the origin through the<br />
i th row (subject) point, and the p column points are projected <strong>on</strong>to<br />
this vector, the collecti<strong>on</strong> of such projecti<strong>on</strong>s is proporti<strong>on</strong>al to the<br />
i th row of the n × p approximati<strong>on</strong> matrix (U n×2 D 2×2 V ′ 2×p) n×p .<br />
The emphasis in this notes has been <strong>on</strong> the descriptive aspects of<br />
principal comp<strong>on</strong>ents. For a discussi<strong>on</strong> of the statistical properties of<br />
these entities, c<strong>on</strong>sult Johns<strong>on</strong> and Wichern (2007) — c<strong>on</strong>fidence intervals<br />
<strong>on</strong> the populati<strong>on</strong> eigenvalues; testing equality of eigenvalues;<br />
assessing the patterning present in an eigenvector; and so <strong>on</strong>.<br />
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