MATLAB Programming

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7 Working with Scientific Data Formats To read any of the extensions in the file, you must specify the name of the extension as an optional parameter. This example reads the BinaryTable extension from the FITS file: bindata = fitsread('tst0012.fits','bintable'); Note To read the BinaryTable extension using fitsread, you must specify the parameter 'bintable'. Similarly, to read the AsciiTable extension, you must specify the parameter 'table'. Seethefitsread reference page for more information. 7-10
Hierarchical Data Format (HDF5) Files Hierarchical Data Format (HDF5) Files Hierarchical Data Format, Version 5, (HDF5) is a general-purpose, machine-independent standard for storing scientific data in files, developed by the National Center for Supercomputing Applications (NCSA). HDF5 is used by a wide range of engineering and scientific fields that want a standard way to store data so that it can be shared. For more information about the HDF5 file format, read the HDF5 documentation available at the HDF Web site (http://www.hdfgroup.org). MATLAB provides both high-level and low-level access to HDF5 files. The high-level access functions make it easy to read a data set from an HDF5 file or write a variable from the MATLAB workspace into an HDF5 file. The MATLAB low-level interface provides direct access to the more than 200 functions in the HDF5 library. For more information, see the following sections. • “Using the MATLAB High-Level HDF5 Functions” on page 7-11 • “Using the MATLAB Low-Level HDF5 Functions” on page 7-26 Note For information about working with HDF4 data, which is a completely separate, incompatible format, see “Hierarchical Data Format (HDF4) Files” on page 7-35. Using the MATLAB High-Level HDF5 Functions The MATLAB high-level HDF5 functions provide an easy way to import data or metadata from an HDF5 file, or write data to an HDF5 file. The following sections provide more detail about using these functions. • “Determining the Contents of an HDF5 File” on page 7-12 • “Importing Data from an HDF5 File” on page 7-15 • “Exporting Data to HDF5 Files” on page 7-16 • “Mapping HDF5 Data Types to MATLAB Data Types” on page 7-18 7-11
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MATLAB ® 7 Programming
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Revision History June 2004 First pr
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Operating on Diagonal Matrices ....
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Creating a Cell Array .............
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12 Programming Tips Command and Fun
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Converting Between Strings and Cell
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A External Interfaces Finding the D
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1 Data Structures Empty Matrices, S
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1 Data Structures A{2,2} = 7; B{1,1
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1 Data Structures Summary of Matrix
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1 Data Structures 1-76
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2 Data Types Cell Arrays (p. 2-94)
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2 Data Types Data Type Summary The
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2 Data Types Numeric Types Numeric
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2 Data Types the two equally nearby
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2 Data Types x = x = 127 -128 Also,
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2 Data Types Floating-Point Numbers
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2 Data Types In this example, 7.5 d
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2 Data Types 8.881784197001252e-016
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2 Data Types Note that the order of
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2 Data Types NaN MATLAB represents
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2 Data Types All available formats
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2 Data Types Integer Functions Func
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2 Data Types Infinity and NaN Funct
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2 Data Types 1 0 0 1 0 1 1 0 The MA
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2 Data Types Function Summary MATLA
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2 Data Types Date Strings There are
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2 Data Types Utility Functions (Con
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2 Data Types 3 4 B = reshape(A, 6,
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2 Data Types A{1,1} = [1 2; 3 4]; A
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3 Basic Program Components Symbol R
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4 M-File Programming Function Argum
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4 M-File Programming Saving the Pro
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4 M-File Programming Improving Perf
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4 M-File Programming Working with M
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5 Types of Functions Overview of MA
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5 Types of Functions % FILTFCN. Eac
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5 Types of Functions 0.6667 filt2(1
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5 Types of Functions Accessing Help
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5 Types of Functions 5-38
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6 Data Import and Export Working wi
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6 Data Import and Export Importing
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6 Data Import and Export File to im
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6 Data Import and Export Example of
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6 Data Import and Export m = memmap
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6 Data Import and Export d = m.Data
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6 Data Import and Export ans = 166x
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6 Data Import and Export If you hav
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6 Data Import and Export m.Data(60)
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6 Data Import and Export m = memmap
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8 Error Handling Checking for Error
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8 Error Handling Handling and Recov
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8 Error Handling X = A * B catch di
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8 Error Handling matrixMultiply(A,
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8 Error Handling Message Identifier
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8 Error Handling error('msg_id', 'e
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8 Error Handling Warnings Like erro
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8 Error Handling Warning Control Th
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8 Error Handling You must type the
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8 Error Handling end function f2(x)
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8 Error Handling Debugging Errors a
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9 Classes and Objects Classes and O
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9 Classes and Objects functions do
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9 Classes and Objects How MATLAB De
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9 Classes and Objects 9-76
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10 Scheduling Program Execution wit
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12 Programming Tips MATLAB Path (p.
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12 Programming Tips Starting MATLAB
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A External Interfaces A-2
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Index arithmetic operators 3-17 ove
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Index debugging 9-6 designing 9-9 j
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Index string, vector of input 2-70
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Index internet 6-116 downloading fr
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Index overloaded 5-37 function work
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Index I if and empty arrays 3-89 ex
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Index scalar 1-47 See also matrices
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Index inheritance multiple 9-40 sim
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Index reading HDF4 data 7-52 from t
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Index rotating matrices 1-34 S save
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MATLAB Programming

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