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Affinity Chromatography - Department of Molecular and Cellular ...

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Purification options<br />

Binding capacity Maximum Comments<br />

operating flow<br />

HiTrap Benzamidine FF Trypsin, > 35 mg/column 4 ml/min (1 ml column) Prepacked columns**.<br />

(high sub) Trypsin, > 175 mg/column 15 ml/min (5 ml column)<br />

Benzamidine Sepharose 4 Trypsin, > 35 mg/ml medium 300 cm/h* Supplied as a<br />

Fast Flow (high sub)<br />

suspension ready for<br />

column packing**.<br />

*See Appendix 4 to convert linear flow (cm/h) to volumetric flow rate. Maximum operating flow is calculated from<br />

measurement in a packed column with a bed height <strong>of</strong> 10 cm <strong>and</strong> i.d. <strong>of</strong> 5 cm.<br />

**Supplied in 0.05 M acetate, pH 4 containing 20% ethanol.<br />

Purification examples<br />

Figure 30 shows an example <strong>of</strong> the removal <strong>of</strong> trypsin-like proteases from human plasma to<br />

prevent proteolysis <strong>of</strong> the plasma components, using a low pH elution. The activity test<br />

demonstrated that almost all trypsin-like protease activity is removed from the sample <strong>and</strong><br />

bound to the column.<br />

Sample: 1 ml human plasma filtered<br />

through a 0.45 µm filter<br />

Column: HiTrap Benzamidine FF<br />

(high sub), 1 ml<br />

Binding buffer: 20 mM Tris-HCl, 0.5 M NaCl,<br />

pH 7.4<br />

Elution buffer: 50 mM glycine, pH 3.0<br />

0–100% elution buffer in<br />

one step<br />

Flow:<br />

1.0 ml/min<br />

System: ÄKTAexplorer<br />

Protease activity: S-2288 from Chromogenix,<br />

Heamochrom Diagnostica AB<br />

A 405 measurement. The activity<br />

is presented as the proteolytic<br />

activity/mg protein<br />

A 280<br />

IU/litre<br />

A 405<br />

3.0<br />

1.00<br />

A 280<br />

2.5<br />

0.80<br />

2.0<br />

0.60<br />

1.5<br />

0.40<br />

1.0<br />

0.20<br />

0.5<br />

0<br />

0.0 5.0 10.0 15.0 ml<br />

Fig. 30. Removal <strong>of</strong> trypin-like serine proteases from human plasma using HiTrap Benzamidine FF (high sub), 1 ml.<br />

Figure 31 shows the effectiveness <strong>of</strong> using a GSTrap FF column with a HiTrap Benzamidine FF<br />

(high sub) for purification <strong>of</strong> a GST fusion protein, followed by cleavage <strong>of</strong> the GST tag via<br />

the thrombin cleavage site <strong>and</strong> subsequent removal <strong>of</strong> the thrombin enzyme. The GST fusion<br />

protein binds to the GSTrap FF column as other proteins wash through the column. Thrombin<br />

is applied to the column <strong>and</strong> incubated for 2 hours.<br />

A HiTrap Benzamidine FF (high sub) column, pre-equilibrated in binding buffer, is attached<br />

after the GSTrap FF column <strong>and</strong> both columns are washed in binding buffer followed by a<br />

high salt buffer. The cleaved protein <strong>and</strong> thrombin wash through from the GSTrap FF column,<br />

thrombin binds to the HiTrap Benzamidine FF (high sub) column, <strong>and</strong> the eluted fractions<br />

contain pure cleaved protein.<br />

54

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