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Bacteriology of Pharyngitis in Suppurative Otitis Media Cases

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Egyptian Journal <strong>of</strong> Medical Microbiology, July 2009 Vol. 18, No. 3<br />

<strong>Bacteriology</strong> <strong>of</strong> <strong>Pharyngitis</strong> <strong>in</strong> <strong>Suppurative</strong> <strong>Otitis</strong> <strong>Media</strong> <strong>Cases</strong><br />

Mona F. Salama*, Alaa Ali Abou-Bieh<br />

Departments <strong>of</strong> Medical Microbiology and Immunology* and Otolaryngology,<br />

Faculty <strong>of</strong> Medic<strong>in</strong>e, Mansoura University<br />

ABSTRACT<br />

Problem Addressed: Unexpla<strong>in</strong>ed persistent or recurrent bacterial pharyngitis <strong>in</strong> some patients who are<br />

suffer<strong>in</strong>g from <strong>in</strong>fected middle ear cleft. Patients and Methods: Bacteriological swabs were obta<strong>in</strong>ed<br />

from both ears and pharynx <strong>of</strong> thirty-seven cases with chronic otorrhea and perforation, who are<br />

compla<strong>in</strong><strong>in</strong>g <strong>of</strong> recurrent or persistent sore throat. Isolation and identification <strong>of</strong> the micro-organisms<br />

were done. Isolated Gram-negative bacilli were subjected to further identification by biochemical<br />

reactions and antimicrobial susceptibility test<strong>in</strong>g us<strong>in</strong>g modified Kirby Bauer disk diffusion method.<br />

Identical isolates from the same patient (ear and pharyngeal swabs) were subjected to further<br />

identification by genotyp<strong>in</strong>g us<strong>in</strong>g the pulsed field gel electrophoresis technique (PFGE). Results: Six<br />

cases (16%) showed identity <strong>in</strong> both phenotypes and genotypes for ear and pharyngeal samples from the<br />

same patient. Four <strong>of</strong> the isolates were Pseudomonas aerug<strong>in</strong>osa, one was Proteus mirabilis, and one<br />

was Escherichia coli. None <strong>of</strong> these three species is known to be among the primary organisms that may<br />

cause pharyngitis. Conclusion: Bacterial pharyngitis <strong>in</strong> patients with chronically <strong>in</strong>fected middle ear<br />

cleft may be attributed to the same organism <strong>in</strong>vad<strong>in</strong>g the middle ear mucosa. In addition, this study<br />

highlights some organisms as pharyngeal <strong>in</strong>vaders although they are not among the previously<br />

documented causes <strong>of</strong> bacterial pharyngitis. However, the study does not confirm the method <strong>of</strong> spread <strong>of</strong><br />

these organisms between the middle ear cleft and the pharynx and does not prove whether the spread was<br />

directly via the eustachian tube, or not. The study correlates the causative organism <strong>of</strong> the middle ear<br />

<strong>in</strong>fection and that <strong>in</strong>fected the pharyngeal mucosa by us<strong>in</strong>g phenotypic and genotypic bacteriological<br />

identification and typ<strong>in</strong>g methods.<br />

Key Words: Chronic suppurative otitis media, <strong>Pharyngitis</strong>, Pulsed field gel electrophoresis.<br />

INTRODUCTION<br />

Chronic throat soreness is a common<br />

compla<strong>in</strong>t. Nowadays it is attributed to a wide<br />

range <strong>of</strong> etiologies. It was noteworthy that the<br />

chronic throat soreness compla<strong>in</strong>t <strong>of</strong> some<br />

patients, whom are at the same time suffer<strong>in</strong>g<br />

from chronically <strong>in</strong>fected middle ear cleft, could<br />

not be attributed to any <strong>of</strong> the known<br />

etiologies (1) .<br />

The aim <strong>of</strong> the present study is to <strong>in</strong>vestigate<br />

whether the reason <strong>of</strong> this compla<strong>in</strong>t is related<br />

to a bacteriological causative agent or not. In<br />

addition, if the cause would be bacteriological,<br />

we aim to f<strong>in</strong>d if there is any correlation<br />

between the causative organism <strong>of</strong> the middle<br />

ear <strong>in</strong>fection and that <strong>in</strong>fected the pharyngeal<br />

mucosa us<strong>in</strong>g phenotypic and genotypic<br />

bacteriological identification and typ<strong>in</strong>g<br />

methods.<br />

PATIENTS<br />

This is a prospective study. The <strong>in</strong>clusion<br />

criteria for cases were be<strong>in</strong>g a known case <strong>of</strong><br />

chronic suppurative otitis media and presented<br />

with chronic sore throat as the pr<strong>in</strong>cipal<br />

compla<strong>in</strong>t. Thirty-seven cases met these criteria<br />

over the eight months study period and were<br />

<strong>in</strong>cluded <strong>in</strong> the study population.<br />

All cases were adults as pediatric patients<br />

were excluded due to the high <strong>in</strong>cidence <strong>of</strong><br />

recurrent attacks <strong>of</strong> acute tonsillitis and acute<br />

pharyngitis. The age ranged between seventeen<br />

and seventy-two with mean fifty-four. There<br />

were twenty-two males and fifteen females.<br />

Eight <strong>of</strong> the males were smokers.<br />

All cases were suffer<strong>in</strong>g from persistent or<br />

recurrent otorrhoea together with tympanic<br />

membrane perforation. N<strong>in</strong>eteen patients had<br />

the disease <strong>in</strong> both ears, ten <strong>in</strong> the right ear and<br />

eight <strong>in</strong> the left ear. Six ears have been<br />

previously operated upon with persistent<br />

mastoid and / or tympanic cavity <strong>in</strong>fection. Two<br />

cases had cholesteatoma but patients were<br />

reluctant to undergo surgery. All ears with<br />

mixed <strong>in</strong>fection or superadded fungal <strong>in</strong>fection<br />

were excluded from the study. In most <strong>of</strong> cases,<br />

the sore throat compla<strong>in</strong>t was <strong>in</strong> the form <strong>of</strong><br />

recurrent attacks. Some patients noticed or<br />

could remember an on / <strong>of</strong>f relation between<br />

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Egyptian Journal <strong>of</strong> Medical Microbiology, July 2009 Vol. 18, No. 3<br />

some soreness attacks and otorrhea bouts. Other<br />

patients compla<strong>in</strong>ed <strong>of</strong> persistent chronic<br />

soreness.<br />

Other etiologies for chronic throat soreness<br />

<strong>in</strong> adults were assessed <strong>in</strong> these patients. Any<br />

form <strong>of</strong> upper aero-digestive tract neoplasia was<br />

excluded. Although this would not exclude<br />

gastroesophageal reflux disease (GERD) or<br />

laryngopharyngeal reflux (LPR), but none <strong>of</strong> the<br />

patients showed any hiatal hernia, reflux, or<br />

delayed gastric empty<strong>in</strong>g <strong>in</strong> the barium swallow<br />

/ upper GI series. Two patients also were<br />

subjected to upper gastro<strong>in</strong>test<strong>in</strong>al endoscopy<br />

(one was prior to his <strong>in</strong>clusion <strong>in</strong> the study).<br />

Dur<strong>in</strong>g the time <strong>of</strong> study five patients were on<br />

antireflux treatment <strong>in</strong>cluded even proton pump<br />

<strong>in</strong>hibitors with m<strong>in</strong>imal or no pharyngeal<br />

symptoms relieve. None <strong>of</strong> the patients had<br />

history <strong>of</strong> previous deep neck spaces<br />

suppuration, any foreign body <strong>in</strong>gestion or<br />

recent neck trauma. In addition, autoimmune<br />

and hematological conditions were excluded.<br />

Blood iron was assessed <strong>in</strong> all females. Two<br />

patients had frequent cement exposure and one<br />

patient with smoke exposure due to their<br />

occupation. N<strong>in</strong>e patients had their tonsils<br />

removed (all more than ten years before the<br />

study time). Eleven patients had postnasal drip<br />

on exam<strong>in</strong>ation, four <strong>of</strong> them showed chronic<br />

s<strong>in</strong>usitis on radiological evaluation (all patients<br />

had bacteriological swabs from their nasal<br />

cavities on further step dur<strong>in</strong>g the study). Five<br />

<strong>of</strong> the eleven patients had used local nasal<br />

steroids before. One patient with cleft palates<br />

and lip had them surgically repaired eighteen<br />

years ago. Two were diabetic patients and four<br />

were hypertensive, two <strong>of</strong> them were on ACE<br />

<strong>in</strong>hibitors and another one was on B blocker.<br />

One patient was asthmatic and on Fluticasone<br />

propionate <strong>in</strong>haler.<br />

All patients were asked to stop topical and<br />

systemic antibiotics ten days at least prior to<br />

samples collection. All patients were <strong>in</strong>formed<br />

about their <strong>in</strong>clusion <strong>in</strong> the study. A written<br />

consent was obta<strong>in</strong>ed from all <strong>of</strong> them.<br />

METHODS<br />

Specimens:<br />

Simultaneous swabs from the ear discharge,<br />

the posterior pharyngeal wall and bilaterally<br />

from the nasal cavities from each patient were<br />

obta<strong>in</strong>ed. This was done at three different<br />

successive sett<strong>in</strong>gs. MDIC ® sterile swabs (Ajax,<br />

Ontario, Canada) were used. Swabs were taken<br />

under proper precautions. They were taken<br />

under direct visualization or endoscopically<br />

guided, after proper external ear canal suction<br />

and were collected as deep as possible, us<strong>in</strong>g<br />

sterile <strong>in</strong>struments.<br />

Isolation and identification <strong>of</strong> microbial<br />

isolates:<br />

Direct Gram sta<strong>in</strong>ed films for all specimens<br />

were prepared and studied first. Then all<br />

specimens were <strong>in</strong>oculated on proper culture<br />

media with <strong>in</strong>cubation at 37 o C for 24 - 48 hours<br />

aerobically. These media were blood agar and<br />

MacConkey’s agar. Then all the isolated<br />

organisms were identified accord<strong>in</strong>g to standard<br />

microbiological methods and, where necessary,<br />

the API (Analytical Pr<strong>of</strong>ile Index) system<br />

(bioMerieux, France) was used. Antimicrobial<br />

susceptibility test (Antibiotyp<strong>in</strong>g) for aerobic<br />

bacteria was performed. This was done by us<strong>in</strong>g<br />

modified Kirby - Bauer disk diffusion method (2) ,<br />

and accord<strong>in</strong>g to the Cl<strong>in</strong>ical and Laboratory<br />

Standards Institute/NCCLS breakpo<strong>in</strong>ts for<br />

<strong>in</strong>terpretation <strong>of</strong> results (3) , us<strong>in</strong>g the follow<strong>in</strong>g<br />

antimicrobial discs and concentrations:<br />

Amikac<strong>in</strong> ® (AK), 30 mg,<br />

Amoxacill<strong>in</strong>/Clavulanic ® acid (AMC), 30 mg,<br />

Aztereonam ® (ATM), 30 mg, Cefotaxime ®<br />

(CTX), 30 mg, Cephrad<strong>in</strong>e ® (CE), 30 mg,<br />

Cipr<strong>of</strong>loxac<strong>in</strong> ® (CIP) 5 mg, Cl<strong>in</strong>damyc<strong>in</strong> ®<br />

(DA), 2 mg, Erythromyc<strong>in</strong> ® (E), 15 mg,<br />

Imipenum ® (IPM), 10 mg, Trimethoprim -<br />

Sulphamethoxazole ® (SXT), 25 mg,<br />

Tetracycl<strong>in</strong> ® (TE), 30 mg and Ceftazidime ®<br />

(CAZ), 30 mg. Apart from the standard<br />

antibiotics, test<strong>in</strong>g was also done specifically for<br />

Gentamic<strong>in</strong> ® (CN), 10 mg and<br />

Chloramphenicol ® (C), 30 mg which are<br />

available locally as topical antibiotic eardrops.<br />

Isolates were considered to belong to different<br />

antibiotypes if at least one difference <strong>in</strong><br />

antibiotic susceptibility was observed (4) . Isolates<br />

from the same patient (ear and pharyngeal<br />

swabs) which showed the same antibiotype<br />

were suspected to be related to the same stra<strong>in</strong>,<br />

and were subjected to further identification for<br />

confirmation by genotyp<strong>in</strong>g us<strong>in</strong>g pulsed field<br />

gel electrophoresis (PFGE).<br />

The genotyp<strong>in</strong>g by pulsed field gel<br />

electrophoresis was done us<strong>in</strong>g the technique<br />

described by Tenover et al. (5) to evaluate the<br />

relatedness <strong>of</strong> the isolates. First, organisms were<br />

grown overnight to plateau phase were<br />

embedded <strong>in</strong> low-melt agarose and digested for<br />

24 hours each, first with lysozyme and then with<br />

prote<strong>in</strong>ase K, both adjusted to 1 mg/mL. The<br />

resultant, which was exposed bacterial DNA,<br />

was then digested with selected endonuclease<br />

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Egyptian Journal <strong>of</strong> Medical Microbiology, July 2009 Vol. 18, No. 3<br />

restriction enzymes designed to yield ten to<br />

twenty-five large fragments. These<br />

endonuclease restriction enzymes were: XbaI<br />

for Enterobacter, Klebsiella, Citrobacter, and<br />

Stenotrophomonas; NotI for Escherichia coli;<br />

SpeI for Pseudomonas and Serratia; and SmaI<br />

for Ac<strong>in</strong>etobacter. DNA fragments then were<br />

separated on 1% agarose gels us<strong>in</strong>g<br />

preprogrammed protocols as recommended by<br />

the manufacturer <strong>of</strong> the apparatus (Biorad<br />

CHEF GenePath System, Hercules, CA).<br />

Accord<strong>in</strong>g to the number <strong>of</strong> band differences<br />

isolates were divided <strong>in</strong>to: 1) <strong>in</strong>dist<strong>in</strong>guishable,<br />

if their restriction patterns have the same<br />

numbers <strong>of</strong> bands, 2) closely related, if their<br />

restriction patterns result <strong>in</strong> two to three bands<br />

difference, 3) possibly related, if their restriction<br />

patterns result <strong>in</strong> four to six bands difference<br />

and 4) unrelated, if their restriction patterns<br />

result <strong>in</strong> seven or more bands difference.<br />

Organisms were def<strong>in</strong>ed as concordant when<br />

they differed by three or fewer bands after<br />

visual <strong>in</strong>spection <strong>of</strong> the restriction endonuclease<br />

pattern. Isolates that were proven to have the<br />

same antibiotype, and were closely related by<br />

PFGE were considered to belong to same<br />

stra<strong>in</strong>s (6) .<br />

RESULTS<br />

Table (1) shows the bacteriology <strong>of</strong> the<br />

eighteen cases with unilaterally <strong>in</strong>fected middle<br />

ear cleft. Pseudomonas aerug<strong>in</strong>osa was the<br />

most commonly detected organism (n<strong>in</strong>e cases),<br />

while Proteus mirabilis was the next<br />

encountered organism (five cases). The situation<br />

was nearly close <strong>in</strong> the n<strong>in</strong>eteen cases with<br />

bilaterally <strong>in</strong>fected middle ear clefts (table 2).<br />

Proteus mirabilis was detected <strong>in</strong> seven cases <strong>in</strong><br />

both ears and <strong>in</strong> one ear only <strong>in</strong> two cases.<br />

Pseudomonas aerug<strong>in</strong>osa was detected <strong>in</strong> both<br />

ears <strong>in</strong> six cases and <strong>in</strong> one ear <strong>in</strong> the two cases<br />

with Proteus <strong>in</strong> the opposite side. Gram-positive<br />

organisms were only detected <strong>in</strong> two cases<br />

where middle ear was unilaterally <strong>in</strong>volved.<br />

Bacteriological pharyngeal swabs f<strong>in</strong>d<strong>in</strong>gs were<br />

significant <strong>in</strong> n<strong>in</strong>eteen cases (table 3). Group A-<br />

β hemolytic Streptococcus pyogenes was the<br />

most commonly encountered species (n<strong>in</strong>e<br />

cases), while four other cases showed α -<br />

hemolytic Streptococci and Staphylococci.<br />

Gram-negative species could be detected <strong>in</strong> six<br />

cases, four <strong>of</strong> them were Pseudomonas<br />

aerug<strong>in</strong>osa, one was Proteus mirabilis and the<br />

last was Escherichia coli. Nasal cavities isolates<br />

were n<strong>in</strong>e cases with Streptococcal pneumoniae<br />

and one case with Klebsiella isolate.<br />

Into a further step <strong>of</strong> organisms<br />

identification, and as mentioned above, isolates<br />

from the same patient (ear and pharyngeal<br />

swabs) which showed the same phenotyp<strong>in</strong>g<br />

and were identical <strong>in</strong> antibiotyp<strong>in</strong>g (Fig 1) were<br />

suspected to be related to the same stra<strong>in</strong>, and<br />

were subjected to further identification for<br />

confirmation by genotyp<strong>in</strong>g us<strong>in</strong>g pulsed field<br />

gel electrophoresis (PFGE). Then after the<br />

results <strong>of</strong> PFGE (Fig 2), isolates that were<br />

proven to have the same antibiotype, and were<br />

closely related by PFGE were considered to<br />

belong to same stra<strong>in</strong>s. By follow<strong>in</strong>g this<br />

stepwise technique, the study could recognize<br />

identity <strong>in</strong> both phenotypes and genotypes for<br />

different samples from the same patient (ear and<br />

pharynx) <strong>in</strong> all the six cases with Gram-negative<br />

isolates from pharyngeal swabs (Tables 4 & 5).<br />

These cases were represent<strong>in</strong>g sixteen percent<br />

<strong>of</strong> the study cases.<br />

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Egyptian Journal <strong>of</strong> Medical Microbiology, July 2009 Vol. 18, No. 3<br />

Table (1): <strong>Bacteriology</strong> <strong>of</strong> <strong>in</strong>fected middle ear cleft <strong>in</strong> unilaterally <strong>in</strong>volved cases<br />

Bacteria<br />

No. <strong>of</strong> <strong>Cases</strong><br />

Pseudomonas aerug<strong>in</strong>osa 9<br />

Proteus mirabilis 5<br />

Escherichia coli 1<br />

Klebsiella sp. 1<br />

Streptococcus sp. 1<br />

Staphylococcus epidermidis 1<br />

- Total number <strong>of</strong> cases 18 - sp. = species<br />

Table (2): <strong>Bacteriology</strong> <strong>of</strong> <strong>in</strong>fected middle ear cleft <strong>in</strong> bilaterally <strong>in</strong>volved cases<br />

Bacteria<br />

No. <strong>of</strong> <strong>Cases</strong><br />

Proteus mirabilis (<strong>in</strong> both ears) 7<br />

Pseudomonas aerug<strong>in</strong>osa (<strong>in</strong> both ears) 6<br />

Proteus mirabilis (<strong>in</strong> one ear) & Pseudomonas aerug<strong>in</strong>osa (<strong>in</strong> other ear) 2<br />

Escherichia coli (<strong>in</strong> both ears) 2<br />

Klebsiella sp. (<strong>in</strong> both ears) 1<br />

Enterobacter sp. (<strong>in</strong> both ears) 1<br />

- Total number <strong>of</strong> cases 19 - sp. = species<br />

Table (3): <strong>Bacteriology</strong> <strong>of</strong> pharyngeal swabs <strong>in</strong> all study cases<br />

Bacteria<br />

No. <strong>of</strong> <strong>Cases</strong><br />

Pseudomonas aerug<strong>in</strong>osa 4<br />

Proteus mirabilis 1<br />

Escherichia coli 1<br />

Group A-β hemolytic Streptococcus pyogenes 9<br />

α - hemolytic Streptococci 2<br />

Staphylococcus sp. 2<br />

No significant growth <strong>in</strong> 3 swabs 18<br />

- Total number <strong>of</strong> cases 37 - sp. = species<br />

Table (4): Detected identity <strong>in</strong> both phenotypes and genotypes for different samples from the same<br />

patient<br />

Bacteria<br />

No. <strong>of</strong> <strong>Cases</strong><br />

Pseudomonas aerug<strong>in</strong>osa 4<br />

Proteus mirabilis 1<br />

Escherichia coli 1<br />

- Total number <strong>of</strong> cases 6<br />

Table (5): Detected identity <strong>in</strong> both phenotypes and genotypes for different samples from the same<br />

patient<br />

Bacteria<br />

No. <strong>of</strong> <strong>Cases</strong><br />

Pseudomonas aerug<strong>in</strong>osa (<strong>in</strong> one ear) 3<br />

Pseudomonas aerug<strong>in</strong>osa (<strong>in</strong> both ears) 1<br />

Proteus mirabilis (<strong>in</strong> both ears) 1<br />

Escherichia coli (<strong>in</strong> both ears) 1<br />

- Total number <strong>of</strong> cases 6<br />

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Egyptian Journal <strong>of</strong> Medical Microbiology, July 2009 Vol. 18, No. 3<br />

Right Ear<br />

Left ear<br />

Pharynx<br />

Fig 1: Isolates from the same patient (both ears and pharyngeal swabs) show<strong>in</strong>g the same antibiotype<br />

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Egyptian Journal <strong>of</strong> Medical Microbiology, July 2009 Vol. 18, No. 3<br />

Fig 2: Detected identity <strong>in</strong> genotypes for different samples from the same patient (Arrow 1: Right Ear,<br />

Arrow 2: Left Ear, Arrow 3: Pharynx, Black Arrow: Marker)<br />

DISCUSSION<br />

The study idea came from an observation for<br />

some cases <strong>of</strong> chronic suppurative otitis media<br />

<strong>in</strong> the outpatient department. Those cases,<br />

although very few, drew the attention to some<br />

serious results. Chronic suppurative otitis media<br />

is a condition which necessitates patient to<br />

follow up for a long period either pre or<br />

postoperatively. Usually the symptoms and<br />

reasons that oblige the patient to seek medical<br />

advice are related to the otorrhea, hear<strong>in</strong>g loss<br />

or that related to sequelae or complications <strong>of</strong><br />

the disease. For those cases who triggered this<br />

study, the ma<strong>in</strong> reason for seek<strong>in</strong>g medical<br />

advice was a long history <strong>of</strong> throat soreness. In<br />

some <strong>of</strong> them, it was so annoy<strong>in</strong>g and<br />

<strong>in</strong>capacitat<strong>in</strong>g for a normal daily life. Even one<br />

<strong>of</strong> the patients was already gett<strong>in</strong>g a psychiatric<br />

counsel<strong>in</strong>g when he jo<strong>in</strong>ed the study. Also, most<br />

<strong>of</strong> the cases when jo<strong>in</strong>ed were already<br />

<strong>in</strong>vestigated for the throat compla<strong>in</strong>t either <strong>in</strong><br />

our hospital or <strong>in</strong> other places. These<br />

<strong>in</strong>vestigations revealed either no clear reason for<br />

the throat compla<strong>in</strong>t or when the reason they<br />

revealed were treated, very limited<br />

improvement could be achieved. Some special<br />

data highlighted a questionable relation between<br />

the otologic problem and the pharyngeal<br />

problem. An on / <strong>of</strong>f relation between the sore<br />

throat and the otorrhea was the first special<br />

symptom demonstrated from the first patient<br />

trigged the study. After several years <strong>of</strong><br />

recurrent attacks <strong>of</strong> otorrhea, the patient could<br />

realize that shortly after the start <strong>of</strong> the otorrhea<br />

attack he usually develop a period <strong>of</strong> severe<br />

soreness <strong>in</strong> his throat. This is usually without<br />

any other systematic manifestation apart from<br />

marked malaise and halitosis locally. This<br />

on/<strong>of</strong>f relation could be demonstrated <strong>in</strong> other<br />

cases jo<strong>in</strong>ed the study later, although some<br />

others noticed that this soreness is persistent <strong>in</strong><br />

its nature. Another remark by some patients was<br />

that only certa<strong>in</strong> antibiotics would be effective<br />

with the pharyngeal problem. As mostly the<br />

otorrhea was treated by local treatment, patients<br />

noticed that their throat soreness usually not<br />

improve by usual antibiotics and most <strong>of</strong> them<br />

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Egyptian Journal <strong>of</strong> Medical Microbiology, July 2009 Vol. 18, No. 3<br />

knew that they need some different antibiotic to<br />

improve (mostly was from the Qu<strong>in</strong>olones<br />

group). In addition, <strong>in</strong> one <strong>of</strong> the early study<br />

cases and dur<strong>in</strong>g an attack <strong>of</strong> otorrhea, a swab<br />

was taken from his pharynx, then we got an<br />

early note from the microbiology laboratory<br />

about a Gram-negative very similar to that<br />

caused the patient’s otorrhea could be<br />

demonstrated <strong>in</strong> the pharyngeal swab.<br />

Accord<strong>in</strong>g to this, we proceeded to <strong>in</strong>vestigate<br />

the case and a phenotype identity could be<br />

assured between ear and pharynx samples <strong>in</strong> this<br />

patient. So this study was designed to<br />

understand this f<strong>in</strong>d<strong>in</strong>gs and try to f<strong>in</strong>d if this<br />

was an isolated situation or it can be<br />

demonstrated <strong>in</strong> other cases (repeatable and<br />

demonstrable).<br />

The protocol for the study was to <strong>in</strong>vestigate<br />

any case met the case selection criteria<br />

(mentioned above <strong>in</strong> the patients section) and<br />

try to f<strong>in</strong>d if its throat compla<strong>in</strong>t is due to a<br />

bacteriological causative agent or not and<br />

whether this agent is related to the same one<br />

<strong>in</strong>volved <strong>in</strong> the ear problem. To ensure<br />

achiev<strong>in</strong>g this, we tried to demonstrate this both<br />

phenotypically by the regular microbiological<br />

methods and genotypically by a more accurate<br />

method. This is because it is known that the<br />

goal <strong>of</strong> stra<strong>in</strong> typ<strong>in</strong>g studies is to provide<br />

laboratory evidence that phenotypically related<br />

isolates are also genetically related and thus<br />

represent the same stra<strong>in</strong> (Tenover et al. 1995)<br />

and subtyp<strong>in</strong>g <strong>of</strong> isolates to the stra<strong>in</strong> level has<br />

been <strong>in</strong>creas<strong>in</strong>gly important <strong>in</strong> order to verify if<br />

organisms are clonally related, i.e. have a<br />

common orig<strong>in</strong> (7) . Several approaches have been<br />

used for subtyp<strong>in</strong>g <strong>of</strong> bacterial isolates,<br />

<strong>in</strong>clud<strong>in</strong>g both phenotyp<strong>in</strong>g and genotyp<strong>in</strong>g so<br />

called f<strong>in</strong>gerpr<strong>in</strong>t<strong>in</strong>g methods; flagell<strong>in</strong> typ<strong>in</strong>g<br />

(Fla), random amplified polymorphic DNA<br />

(RAPD), amplified fragment length<br />

polymorphism (AFLP), multilocus enzyme<br />

electrophoresis (MEE), nucleotide sequenc<strong>in</strong>g<br />

(NS), polymerase cha<strong>in</strong> reaction (PCR) and<br />

pulse field gel electrophoresis (PFGE) (8) .<br />

Genotyp<strong>in</strong>g methods may be compared based<br />

on a range <strong>of</strong> criteria, <strong>in</strong>clud<strong>in</strong>g sensitivity,<br />

availability, reproducibility, rapidity, ease <strong>of</strong><br />

use, and cost. One <strong>of</strong> the most important<br />

characteristic is discrim<strong>in</strong>atory power <strong>of</strong> the<br />

technique (8) . The genotyp<strong>in</strong>g by the pulsed field<br />

gel electrophoresis technique was chosen<br />

because it is a genomic-based method that has<br />

been successfully used for the subtyp<strong>in</strong>g <strong>of</strong><br />

several bacterial species (9,10) . Except for the long<br />

time need (the whole procedure can take as long<br />

as four days) and be<strong>in</strong>g an expensive method<br />

that requires sophisticated equipment, pulsed<br />

field gel electrophoresis is the genotyp<strong>in</strong>g<br />

method that proven to be superior to most other<br />

biochemical and molecular typ<strong>in</strong>g methods with<br />

its high discrim<strong>in</strong>atory powers regard<strong>in</strong>g<br />

different bacterial stra<strong>in</strong>s (11) .<br />

Besides detect<strong>in</strong>g <strong>of</strong> a bacteriological<br />

causative agent for pharyngitis <strong>in</strong> sixteen<br />

percent <strong>of</strong> the study population whom were<br />

suffer<strong>in</strong>g for years without known etiology, the<br />

results <strong>in</strong> general presented another two ma<strong>in</strong><br />

end-po<strong>in</strong>ts. First, is recogniz<strong>in</strong>g identity <strong>in</strong> both<br />

phenotypes and genotypes for ear and pharynx<br />

samples <strong>of</strong> the same patient. Second, is<br />

demonstrat<strong>in</strong>g Gram-negative isolates from<br />

pharyngeal swabs that are not known to be<br />

among the primary organisms which may cause<br />

pharyngitis.<br />

On review<strong>in</strong>g the previously published<br />

studies, the primary causative bacterial<br />

organisms <strong>of</strong> chronic suppurative otitis media<br />

may be aerobic <strong>in</strong>clud<strong>in</strong>g Pseudomonas<br />

aerug<strong>in</strong>osa, Escherichia coli, Staphylococcus<br />

aureus, Streptococcus pyogenes, Proteus<br />

mirabilis and Klebsiella species or anaerobic<br />

<strong>in</strong>clud<strong>in</strong>g Bacteroides, Peptostreptococcus and<br />

Proprionibacterium. Bacteria that may lead to<br />

acute suppurative otitis media on top <strong>of</strong> chronic<br />

suppurative otitis media <strong>in</strong>clude Streptococcus<br />

pneumoniae, Staphylococcus aureus,<br />

Haemophilus <strong>in</strong>fluenzae and Micrococcus<br />

catarrhalis. These are respiratory pathogens that<br />

may have been <strong>in</strong>sufflated from the<br />

nasopharynx <strong>in</strong>to the middle ear through the<br />

Eustachian tube dur<strong>in</strong>g bouts <strong>of</strong> upper<br />

respiratory <strong>in</strong>fections (12) . Pseudomonas<br />

aerug<strong>in</strong>osa has been particularly blamed for the<br />

deep-seated and progressive destruction <strong>of</strong><br />

middle ear and mastoid structures through its<br />

tox<strong>in</strong>s and enzymes (13) . Our present study<br />

f<strong>in</strong>d<strong>in</strong>gs regard the bacterial causatives <strong>of</strong><br />

chronic ear active <strong>in</strong>fection (or even if it was<br />

acute on top <strong>of</strong> chronic <strong>in</strong>fection) are almost the<br />

same as these published literatures (Tables 1 &<br />

2).<br />

Meanwhile the published studies about<br />

primary causative organisms <strong>of</strong> bacterial<br />

pharyngitis showed that bacterial pharyngitis is<br />

less common than viral and its s<strong>in</strong>gle most<br />

frequent cause is Group A-β hemolytic<br />

Streptococcus pyogenes. They found other<br />

bacterial causes <strong>in</strong>clude Group C, G, F<br />

streptococci, Arcanobacterium haemolyticum,<br />

Neisseria gonorrhoeae, Treponema pallidum,<br />

Chlamydia pneumoniae, Mycoplasma<br />

7


Egyptian Journal <strong>of</strong> Medical Microbiology, July 2009 Vol. 18, No. 3<br />

pneumoniae, Mycobacterium tuberculosis<br />

Francisella tularensis, Corynebacterium<br />

diphtheriae, Yers<strong>in</strong>ia enterocolitica and<br />

Yers<strong>in</strong>ia pestis (14,15,16) . In addition, the normal<br />

throat <strong>in</strong>habitants are Staphylococcus aureus,<br />

Streptococcus viridans, Bacteroids,<br />

Haemophilus <strong>in</strong>fluenzae, Haemophilus<br />

para<strong>in</strong>fluenzae, Escherichia coli and<br />

Enterobacteriaceae (17) . In our present work also,<br />

the ma<strong>in</strong> organism detected was the Group A-β<br />

hemolytic Streptococcus pyogenes (Table 3).<br />

The difference between our results and the other<br />

published studies is the detection <strong>of</strong> three types<br />

<strong>of</strong> organisms <strong>in</strong> sixteen percent <strong>of</strong> cases that are<br />

not mentioned <strong>in</strong> the literature as primary<br />

causative <strong>of</strong> bacterial pharyngitis. These are<br />

four Pseudomonas aerug<strong>in</strong>osa cases, one<br />

Proteus mirabilis case and one Escherichia coli<br />

case (Tables 4 & 5). This f<strong>in</strong>d<strong>in</strong>g together with<br />

hav<strong>in</strong>g the study could recognize identity <strong>in</strong><br />

both phenotypes and genotypes for different<br />

samples from the same patient (ear and<br />

pharynx) <strong>in</strong> all <strong>of</strong> these six cases, would prove<br />

that bacterial pharyngitis <strong>in</strong> patients with<br />

chronically <strong>in</strong>fected middle ear cleft may be<br />

attributed to the same organism <strong>in</strong>vaded the<br />

middle ear mucosa. This also would expla<strong>in</strong> the<br />

chronological relation between the patients’<br />

otorrhea and throat symptoms and these<br />

symptoms improvement with antibiotics that<br />

affects Gram-negative organisms either before<br />

or dur<strong>in</strong>g the study. Moreover, this would<br />

expla<strong>in</strong> the severity <strong>of</strong> symptoms <strong>in</strong> some cases<br />

as these organisms are known by produc<strong>in</strong>g<br />

destructive tox<strong>in</strong>s and enzymes and may lead to<br />

pharyngeal muscles and structures <strong>in</strong>flammation<br />

rather than the simple mucosal <strong>in</strong>flammation<br />

caused by the usual pathogens (18) .<br />

The study could not confirm the method and<br />

the route <strong>of</strong> spread <strong>of</strong> these organisms between<br />

the middle ear cleft and the pharyngeal area and<br />

if this might be through the eustachian tube. In<br />

addition, it could not expla<strong>in</strong> why these<br />

organisms were not detected <strong>in</strong> the results <strong>of</strong> the<br />

nasal swabs, which were taken simultaneously<br />

with the pharyngeal swabs. Although we<br />

suggest that, this may be due to the action <strong>of</strong> the<br />

nasal mucociliary transport<strong>in</strong>g function and its<br />

direction toward the pharynx and away from the<br />

nasal cavities (19) . Another item worth enough to<br />

be noticed, negative pharyngeal swabs <strong>in</strong><br />

suspected cases like those <strong>in</strong>cluded <strong>in</strong> this study,<br />

should not be consider conclusive. As we<br />

noticed dur<strong>in</strong>g our work, the tim<strong>in</strong>g <strong>of</strong><br />

pharyngeal swab <strong>in</strong> relation to the onset <strong>of</strong><br />

otorrhea is very important.<br />

CONCLUSION<br />

Bacterial pharyngitis <strong>in</strong> patients with<br />

chronically <strong>in</strong>fected middle ear cleft may be<br />

attributed to the same organism <strong>in</strong>vaded the<br />

middle ear mucosa. In addition, this study<br />

highlights some organisms as pharyngeal<br />

<strong>in</strong>vaders (under special circumstances) although<br />

they are not among the previously documented<br />

causatives <strong>of</strong> bacterial pharyngitis.<br />

REFERENCES<br />

1. Acu<strong>in</strong> J. <strong>Bacteriology</strong>. In: Chronic<br />

suppurative otitis media: Burden <strong>of</strong> Illness<br />

and Management Options. Geneva: WHO<br />

2004. p. 10 - 1.<br />

2. Bauer AW, Kirby WM, Sherris JC,<br />

Turck M. Antibiotic susceptibility test<strong>in</strong>g<br />

by a standardised s<strong>in</strong>gle disc method. Am J<br />

Cl<strong>in</strong> Pathol 1966; 45: 493-6.<br />

3. Cl<strong>in</strong>ical and Laboratory Standards<br />

Institute /NCCLS: Methods for<br />

determ<strong>in</strong><strong>in</strong>g bactericidal activity <strong>of</strong><br />

antimicrobial agents: approved guidel<strong>in</strong>e<br />

M26-A, Wayne, Pa, 1999, CLSI.<br />

4. Struelens MJ, Deplano A, Godard C,<br />

Maes N, Serruys E. Epidemiologic typ<strong>in</strong>g<br />

and del<strong>in</strong>eation <strong>of</strong> genetic relatedness <strong>of</strong><br />

methicill<strong>in</strong>-resistant Staphylococcus aureus<br />

by macrorestriction analysis <strong>of</strong> genomic<br />

DNA by us<strong>in</strong>g pulsed-field gel<br />

electrophoresis. J Cl<strong>in</strong> Microbiol 1992;<br />

30(10):2599 - 605.<br />

5. Tenover FC., Arbeit RD, Goer<strong>in</strong>g RV,<br />

Mickelsen PA, Murray BE, Pers<strong>in</strong>g DH,<br />

Swam<strong>in</strong>athan B. Guest Commentary:<br />

Interpret<strong>in</strong>g chromosomal DNA restriction<br />

patterns produced by pulsed-field gel<br />

electrophoresis: criteria for bacterial stra<strong>in</strong><br />

typ<strong>in</strong>g. J. Cl<strong>in</strong>. Microbiol 1995; 33: 2233 –<br />

9.<br />

6. O'Neill GL, Murchan S, Gil-Setas A,<br />

Aucken HM. Identification and<br />

characterization <strong>of</strong> phage variants <strong>of</strong> a<br />

stra<strong>in</strong> <strong>of</strong> epidemic methicill<strong>in</strong>-resistant<br />

Staphylococcus aureus (EMRSA-15). J<br />

Cl<strong>in</strong> Microbiol 2001; 39: 1540 - 8.<br />

7. Adamsson I, Edlund C, Seensalu R,<br />

Engstrand L. The use <strong>of</strong> AP-PCR and<br />

flaA-RFLP typ<strong>in</strong>g <strong>in</strong>vestigate treatment<br />

failure <strong>in</strong> Helicobacter pylori <strong>in</strong>fection. Cl<strong>in</strong><br />

Micribiol and Infect 2002; 6: 265 -7.<br />

8. Wassenaar TM, Newell DG. M<strong>in</strong>ireview,<br />

Genotyp<strong>in</strong>g <strong>of</strong> Campylobacter spp. Ap. and<br />

Env. Microbiol 2000; 66: 1 - 9.<br />

8


Egyptian Journal <strong>of</strong> Medical Microbiology, July 2009 Vol. 18, No. 3<br />

9. Murray B, S<strong>in</strong>gh K, Don Heath J,<br />

Sharma B, We<strong>in</strong>stock G. Comparison <strong>of</strong><br />

genomic DNAs <strong>of</strong> different enterococcal<br />

isolates us<strong>in</strong>g restriction endonucleases<br />

with <strong>in</strong>frequent recognition sites. J Cl<strong>in</strong><br />

Microbiol 1990; 9: 2059 – 63.<br />

10. Nass T, Oxacelay C, Nordmann P.<br />

Identification <strong>of</strong> CTXM-type Extended-<br />

Spectrum beta –Lactamase genes us<strong>in</strong>g<br />

real-time PCR and pyrosequenc<strong>in</strong>g.<br />

Antimicrobial Agents and Chemotherapy<br />

2007; 51: 223 - 30.<br />

11. Olive DM, Bean P. Pr<strong>in</strong>ciples and<br />

applications <strong>of</strong> methods for DNA-based<br />

typ<strong>in</strong>g <strong>of</strong> microbial organisms. J Cl<strong>in</strong><br />

Microbiol 1999; 37: 1661 – 9.<br />

12. Brook I, Frazier E. Microbial dynamics <strong>of</strong><br />

persistent purulent otitis media <strong>in</strong> children.<br />

J Pediatrics 1996: 128: 237-240.<br />

13. Mawson S, Pollack M. Special role <strong>of</strong><br />

Pseudomonas aerug<strong>in</strong>osa <strong>in</strong> chronic<br />

suppurative otitis media. Ann Otol Rh<strong>in</strong>ol<br />

Laryngol H N Surg 1988: 97 (Suppl 130):<br />

10 - 13.<br />

14. Pichichero ME. Group A streptococcal<br />

tonsillopharyngitis: cost-effective diagnosis<br />

and treatment. Ann Emerg Med 1995; 25:<br />

390 - 403.<br />

15. L<strong>in</strong>der JA, Stafford RS. Antibiotic<br />

treatment <strong>of</strong> adults with sore throat by<br />

community primary care physicians: a<br />

national survey, 1989-1999. JAMA 2001;<br />

286:1181 - 6.<br />

16. CDC. Manual for the Surveillance <strong>of</strong><br />

Vacc<strong>in</strong>e-Preventable Diseases. 2008; 4 th<br />

Edition.<br />

17. Bonilla JA, Bluestone CD. <strong>Pharyngitis</strong>.<br />

When is aggressive treatment warranted?<br />

Postgrad Med 1995; 97: 61 - 2, 65 - 9.<br />

18. Rafailidis PI, Kapaskelis A, Falagas ME.<br />

Multifocal Pseudomonas aerug<strong>in</strong>osa<br />

myositis <strong>in</strong> an apparently healthy adult. Eur<br />

J Cl<strong>in</strong> Microbiol Infect Dis 2008; 27: 159 -<br />

61.<br />

19. Baroody FM. Mucociliary transport <strong>in</strong><br />

chronic rh<strong>in</strong>os<strong>in</strong>usitis. Cl<strong>in</strong> Allergy<br />

Immunol 2007; 20: 103 - 19.<br />

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Egyptian Journal <strong>of</strong> Medical Microbiology, July 2009 Vol. 18, No. 3<br />

البكتريا المسببة لإلتهاب الحل ق في حالات التهاب الأذن الوسطى التقيحي<br />

*<br />

-<br />

د.‏ منى فودة سلامة د.‏ علاء علي أبو بيه<br />

من قسمي الميكروبيولوجيا والمناعة الطبية و الأذن والانف والحنجرة*‏<br />

– آلية طب المنصورة<br />

،<br />

يعاني بعض مرضى التهابات الأذن الوسطى من التهاب دائم او مرتجع بالحلق ، وتهدف هذه الدراسة إلى معرفة ما إذا آان<br />

مسبب هذا الإلتهاب بكتيري أم لا آما تهدف لمعرفة وجود أي ارتباط بين البكتيريا المسببة لالتهاب الاذن الوسطى وتلك<br />

الموجودة بالحلق وذلك عن طريق طرق التصنيف الميكروبي الظاهري والجيني.‏<br />

وقد اشتملت هذه الدراسة على سبع وثلاثين حالة تعاني من الإصابة بالتهاب صديدي مزمن بالأذن الوسطى وتعاني في الوقت<br />

نفسه من التهاب مزمن بالحلق.‏ وقد تم أخذ مسحات بكتيرية متزامنة ومتعددة من الاذنين و الحلق والبلعوم وتم عزل<br />

الميكروبات الموجودة بالاذن والحلق وتم فحصها عن طريق أفلام مصبوغة بالجرام من المسحات مباشرة قبل وبعد زراعتها<br />

على الأوساط البكتيرية.‏ ثم خضعت الميكروبات سالبة الجرام المسببة للإلتهاب للتصنيف الظاهري عن طريق اختبار<br />

الحساسية للمضادات الحيوية والإختبارات الكيميائية ثم التصنيف الجيني باستخدام الفصل الكهربائي متعدد المجال.‏<br />

وقد أثبتت الدراسة وجود تطابق ظاهري وجيني للسلالات الميكروبية المسببة لالتهاب الأذن الوسطى والبلعوم في ١٦% من<br />

الحالات ، وقد عزل ميكروب الزائفة الزنجارية aerug<strong>in</strong>osa) (Pseudomonas من حلق أربع حالات وميكروب<br />

الإشريكية القولونية من حالة وميكروب المتقلبة الرائعة mirabilis) (Proteus من حالة أخرى.‏ و المعروف ان<br />

أي من هذه الميكروبات الثلاث غير مصنف من الميكروبات الأولية المسببة لالتهاب الحلق.‏<br />

وقد خلصت هذه الدراسة إلى ان التهاب الحلق والبلعوم في بعض المرضى المصابين بالتهاب الأذن الوسطى التقيحي يمكن أن<br />

يعزى لنفس الميكروب الموجود بالأذن الوسطى آما اثبتت ان بعض الميكروبات التي لم تكن مصنفة من قبل آمسببات اولية<br />

لالتهاب البلعوم يمكن ان تتسبب في التهاب الحلق والبلعوم تحت شروط خاصة.‏<br />

(E.coli)<br />

10

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