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(Agri 1501) Recombinant DNA/Animal & Medical Bi - University of ...

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Name_____________________________<br />

<strong>Bi</strong>otechnology, Society and the Environment (<strong>Agri</strong> <strong>1501</strong>)<br />

<strong>Recombinant</strong> <strong>DNA</strong>/<strong>Animal</strong> & <strong>Medical</strong> <strong>Bi</strong>otechnology Exam—March 8, 2006<br />

Multiple Choice. Choose the best answer for each <strong>of</strong> the following questions.<br />

(2 pts./question; 48 pts. total).<br />

1. A promoter is:<br />

a. a protein<br />

b. an antibody<br />

c. a regulator <strong>of</strong> RNA transcription in a tissue-specific manner<br />

d. something that binds antigens<br />

2. Pre-implantation diagnosis utilizes<br />

a. PCR analysis to screen for genetic defects<br />

b. in vivo fertilization<br />

c. animal cell transformation<br />

d. repeated, non-expressed sequences<br />

3. The ploidy <strong>of</strong> a normal somatic animal cell is:<br />

a. 4N<br />

b. 1N<br />

c. 2N<br />

d. sub-tetraploid<br />

e. anueploid<br />

4. Tumor suppressor genes allow:<br />

a. sterility to occur<br />

b. cells to proliferate unregulated<br />

c. oncogenes and cell cycle regulation to function normally<br />

d. are always mutated<br />

e. kill cells<br />

5. A physical method <strong>of</strong> gene transfer in animal cells:<br />

a. retrovirus<br />

b. herpes virus<br />

c. liposomes<br />

d. microinjection<br />

6. Somatic cell nuclear transfer can produce clones from:<br />

a. nuclei from adult cells<br />

b. tissue <strong>DNA</strong><br />

c. mitochondria<br />

d. ribosomes


7. Classical breeding can be used for animal improvement by selecting for:<br />

a. totipotency<br />

b. decreased carcass fat<br />

c. single genes<br />

d. smarter animals<br />

e. smellier animals<br />

8. A disease that worsens as the number <strong>of</strong> triple nucleotide repeats<br />

increases:<br />

a. Huntington’s chorea<br />

b. Parkinsons<br />

c. diabetes<br />

d. aging<br />

9. What advantages do recombinate proteins made in animal cells have over<br />

those made in bacterial expression systems?<br />

a. they are correctly post-transcriptionally modified<br />

b. they are correctly post-translationally modified<br />

c. they have more amino acids<br />

d. they have fewer amino acids<br />

e. they mutate less frequently<br />

10. Retroviruses spread throughout a brain tumor but not brain nerve cells<br />

because retroviruses target:<br />

a. dividing cells<br />

b. non-dividing cells<br />

c. other viruses<br />

d. bacteria<br />

e. only cerebral brain cells<br />

11. Currently the most rapidly increasing type <strong>of</strong> diabetes<br />

a. Type 1<br />

b. Type 2<br />

c. Type 3<br />

d. Gestational<br />

12. Microinjection <strong>of</strong> animal embryos works with low efficiency, but not at all<br />

for:<br />

a. pigs<br />

b. chickens<br />

c. cattle<br />

d. mice


13. The way to tell if a transgene construct is actually expressed<br />

a. northern blot analysis<br />

b. Southern blot analysis<br />

c. western blot analysis<br />

d. eastern blot analysis<br />

14. Example <strong>of</strong> an ectodermal cell type:<br />

a. Skin<br />

b. Bone<br />

c. Liver<br />

d. Muscle<br />

15. A biological reason NOT to clone humans:<br />

a. can’t be 100% sure all genes will be expressed normally<br />

b. they won’t all look like each other<br />

c. they won’t all be the same size<br />

d. they won’t have the same intelligence<br />

16. Embryonic stem cells derived from the inner cell mass <strong>of</strong> the blastoderm<br />

that give rise to the gonads and the next generation <strong>of</strong> sex cells<br />

a. STRs<br />

b. PGCs<br />

c. ESTs<br />

d. SNPs<br />

17. Altered nuclear transfer (ANT) is a very new technology that gets around<br />

destroying embryos to derive ES cells and works<br />

a. just like somatic cell nuclear transfer<br />

b. by using somatic cell nuclear transfer with the gene for implantation<br />

into the uterus knocked out<br />

c. just like therapeutic cloning<br />

d. just like reproductive cloning<br />

e. probably won’t work<br />

18. Replacement proteins produced following gene therapy should:<br />

a. be toxic only at high doses<br />

b. be effective at less that 100% normal values<br />

c. be toxic to cure the disease<br />

d. be able not to cure the disease at low doses


19. The new discipline <strong>of</strong> analyzing data from the genome projects<br />

a. bioinformatics<br />

b. hyper genomics<br />

c. nutriomics<br />

d. proteomics<br />

e. secretomics<br />

20. A relative map distance where there is 1% recombination<br />

a. is a physical measurement<br />

b. is a genetic measurement called a centimorgan<br />

c. is the same in all species<br />

d. is a way to measure repetitive <strong>DNA</strong><br />

21. The CFTR and Huntington’s genes were both isolated using<br />

a. forward genetics<br />

b. reverse genetics<br />

c. library screeing<br />

d. enzymatic activity<br />

e. biochemical analysis<br />

22. Epithelial cells<br />

a. look just like fibroblastic cells<br />

b. have a different karyotype than fibroblastic cells<br />

c. are cobblestone in appearance and are the origins <strong>of</strong> about 60% <strong>of</strong> all<br />

human tumors<br />

d. cannot be grown using cell culture methods<br />

23. Embryonic stem cells when inside a trophoblast are considered to be:<br />

a. pluripotent<br />

b. impotent<br />

c. totipotent<br />

d. omnipotent<br />

e. awful<br />

24. The newly completed Zebrafish genome project is important for:<br />

a. Repetitive elements<br />

b. Functional genomics<br />

c. RFLP analysis<br />

d. bait


Fill in the blank (2 pts./question;18 pts. total)<br />

_________1. In the presence <strong>of</strong> “Blue-Gal”, white colonies are bacteria that<br />

contain: A) Non-recombinant plamids; or B) <strong>Recombinant</strong><br />

plasmids<br />

_________2.<br />

Type <strong>of</strong> enzyme that recognizes specific <strong>DNA</strong> sequences and<br />

cut at that site.<br />

_________3.<br />

_________4.<br />

_________5.<br />

_________6.<br />

Which type <strong>of</strong> diabetes is the result <strong>of</strong> autoimmunity?<br />

What a foreign organ or tissue transplanted into a different<br />

species is called<br />

Inner mass cells can give rise to these pluripotent cells grown in<br />

culture<br />

Name an autosomal recessive disease<br />

_________7.<br />

Mitochondrial <strong>DNA</strong> can be used to detect maternally inherited <strong>DNA</strong><br />

but can’t discern brother/sister mitochondrial <strong>DNA</strong> (T/F?).<br />

_________8.<br />

Three generations (or more) <strong>of</strong> ________ families that have a disease<br />

are used in reverse genetics to locate disease genes.<br />

_________9.<br />

If a <strong>DNA</strong> polymorphism is very close to a gene that causes a<br />

disease, it can be used as a reliable_________for that disease.


Matching (2pts/question; 18 pts. total).<br />

_____1. Way to prove a transgene was injected into a mouse fertilized pronuclei<br />

_____2. An example <strong>of</strong> a polygenic trait<br />

_____3. Transgenic fish with this protein can grow in very cold (28 o F) waters<br />

_____4. Adenovirus vectors are used in cystic fibrosis gene therapy because<br />

they “home” to this organ.<br />

_____5. The “H” in avian influenza H5N1 stands for what?<br />

_____6. Researchers at the <strong>University</strong> <strong>of</strong> Minnesota have just recently shown<br />

that pancreatic islet cells transplanted from these animals produce<br />

insulin in monkeys.<br />

_____7. In the PCR reaction, what step occurs at about 55-62 o C?<br />

_____8. Chromosomal genetic disorder<br />

_____9. Research method where expression levels <strong>of</strong> all the genes in an<br />

organism can be analyzed at one time<br />

A. Hypertension K. Antifreeze protein<br />

B. Foot L. Hemagglutinin<br />

C. Northern blot M. Left handedness<br />

D. Post transcriptional N. Primer annealing<br />

E. Eastern blot O. Totipotent<br />

F. Herpes P. Lung<br />

G. Zebrafish Q. Trisomy 21 (Down’s syndrome)<br />

H. ADA R. <strong>DNA</strong> microarray chip<br />

I. Denaturing S. Southern blot<br />

J. Microwave T. Pigs


Short answer question (6 pts.)<br />

Using nuclear <strong>DNA</strong>, short tandem repeats can be used to identify 1 person out <strong>of</strong><br />

10 18 . But only 13 different primer pairs are used to identify these differences.<br />

How can so few different primer pairs identify a single genotype (person) out <strong>of</strong><br />

such a huge human genotype (or population <strong>of</strong>10 18 )?<br />

Essay question (10 pts.)<br />

Given our current national debate over civil liberties vs. national security and the<br />

wire-tapping <strong>of</strong> private citizens, explain how you feel about the potential use in<br />

the future <strong>of</strong> your genetic code by the government. How do you feel about the<br />

government using your genetic information to alert you to a horrible genetic<br />

disorder. Is your opinion different if your doctor alerts you? How so? What if the<br />

government uses genetic information to alert your community about a potential<br />

sociopath based on an identified genetic mutation? Are your answers to all <strong>of</strong><br />

these questions consistent? Explain why or why not.

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