DNA Microarray Image Analysis - University of Illinois at Urbana ...

More documents

Recommendations

Info

Foreground Separation Using Intensity Based Clustering • Examples of accurate (left – original image, and second from left - label image) and inaccurate (second from right – original image, and right – label image) foreground separation using intensity based clustering. 58
Foreground Separation Using Intensity Based Segmentation • Frequently used seeded region growing and watershed segmentation methods • An example of pros and cons of foreground separation using intensity based clustering and segmentation. Left – original image, middle – segmentation result and right – clustering result. • Multiple interpretations of the original grid cell image on the left side 59
Page 1 and 2:
February 4, 2005 DNA Microarray Ima
Page 3 and 4:
Publications • Journals: — Bajc
Page 5 and 6:
Microarray Problem: Major Objective
Page 7 and 8: Input and Output of Microarray Data
Page 9 and 10: Types of Expected Microarray Data M
Page 11 and 12: 11 Microarray Data Processing Workf
Page 13 and 14: DNA Microarray Image Analysis • T
Page 15 and 16: Ideal Microarray Image? 1. Ideal cD
Page 17 and 18: Microarray Image Technologies • A
Page 19 and 20: Variations of Grid Geometry • Rot
Page 21 and 22: Variation of Spot Morphology • Sp
Page 23 and 24: Examples: Spatially Varying Backgro
Page 25 and 26: 25 Examples: Spatial Resolution, Li
Page 27 and 28: IMAGE ANALYSIS: MICROARRAY GRID ALI
Page 29 and 30: Grid Alignment: Application Domains
Page 31 and 32: 31 Microarray Grid Alignment: Previ
Page 33 and 34: Microarray Grid Alignment: Previous
Page 35 and 36: 35 Grid Alignment Algorithm Overvie
Page 37 and 38: Image Down-Sampling • Design of r
Page 39 and 40: Vertical and Horizontal Line Score
Page 41 and 42: Optional Regularity Enforcement •
Page 43 and 44: Processing Multiple Grids Line Disc
Page 45 and 46: Spot Size & Spot Density 45 •Radi
Page 47 and 48: Missing Spots The fewer the spots i
Page 49 and 50: Down-sampling •Experimental resul
Page 51 and 52: Grid Alignment Properties Color Inv
Page 53 and 54: Multiple Grids: Semi-Automated vs.
Page 55 and 56: 55 MICROARRAY FOREGROUND SEPARATION
Page 57: Foreground Separation Using Spatial
Page 61 and 62: Foreground Separation From Multi-Ch
Page 63 and 64: Step 1: Separating Spots from Backg
Page 65 and 66: Goals and Objectives of Quality Ass
Page 67 and 68: Quality Assessment: Spot Examples
Page 69 and 70: Criteria for Assessing Morphologica
Page 71 and 72: I2K Selecting Valid Pixels - SNR Me
Page 73 and 74: I2K Selecting Valid Pixels - Topolo
Page 75 and 76: 75 MICROARRAY DATA QUANTIFICATION A
Page 77 and 78: Spot Descriptors • Volume of fore
Page 79 and 80: Visualization of Spot Descriptors S
Page 81 and 82: Normalization • Normalization usi
Page 83 and 84: 83 MICROARRAY DATA FUSION, ANALYSIS
Page 85 and 86: Visualization • Data: 3D cubes,di
Page 87 and 88: Web-Based Documentation 87 http://a
show all

DNA Microarray Image Analysis - University of Illinois at Urbana ...

You also want an ePaper? Increase the reach of your titles

Delete template?

Save as template?