A classification tool for N-way arrays based on SIMCA methodology
A classification tool for N-way arrays based on SIMCA methodology
A classification tool for N-way arrays based on SIMCA methodology
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<strong>SIMCA</strong> extensi<strong>on</strong> to N-<str<strong>on</strong>g>way</str<strong>on</strong>g><br />
algorithm flow chart<br />
X , Class index<br />
Methods<br />
Fac Min - Fac MAx<br />
XvalResult<br />
Xfit Result<br />
XtestResult<br />
Classificati<strong>on</strong> routine<br />
Loop <strong>on</strong> classes<br />
choose CV splits<br />
Loop <strong>on</strong> Factors<br />
pretreatment<br />
model <strong>on</strong> calibrati<strong>on</strong> set<br />
external test set estimati<strong>on</strong><br />
other classes samples estimati<strong>on</strong><br />
CV estimati<strong>on</strong><br />
calculate H, H_CV, D_CV, D-statistics<br />
store models and statistics as structured<br />
<str<strong>on</strong>g>arrays</str<strong>on</strong>g>(f,c)<br />
end factors<br />
end classes<br />
Loop <strong>on</strong> classes<br />
LV’s corresp<strong>on</strong>ding to minium press<br />
apply the different <str<strong>on</strong>g>classificati<strong>on</strong></str<strong>on</strong>g> rules<br />
calculate SENS, SPEC, Test set assignati<strong>on</strong><br />
Loop <strong>on</strong> Factors<br />
apply different <str<strong>on</strong>g>classificati<strong>on</strong></str<strong>on</strong>g> rules<br />
calculate SENS, SPEC, Test set assignati<strong>on</strong><br />
store SENS, SPEC as 3w-<str<strong>on</strong>g>arrays</str<strong>on</strong>g>(c, …,f)<br />
store test set assignati<strong>on</strong> as structured array<br />
end factors<br />
end classes<br />
store data<br />
SENS = % of samples bel<strong>on</strong>ging to the class correctly recognized<br />
SPEC = % of samples not bel<strong>on</strong>ging to the class correctly refused<br />
Graphical<br />
representati<strong>on</strong><br />
routine<br />
SENS , SPEC<br />
TRICAP 2009<br />
Dr. Marina CocchiMORE chemometrics,<br />
Department of Chemistry-University of Modena