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A classification tool for N-way arrays based on SIMCA methodology

A classification tool for N-way arrays based on SIMCA methodology

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<strong>SIMCA</strong> extensi<strong>on</strong> to N-<str<strong>on</strong>g>way</str<strong>on</strong>g><br />

algorithm flow chart<br />

X , Class index<br />

Methods<br />

Fac Min - Fac MAx<br />

XvalResult<br />

Xfit Result<br />

XtestResult<br />

Classificati<strong>on</strong> routine<br />

Loop <strong>on</strong> classes<br />

choose CV splits<br />

Loop <strong>on</strong> Factors<br />

pretreatment<br />

model <strong>on</strong> calibrati<strong>on</strong> set<br />

external test set estimati<strong>on</strong><br />

other classes samples estimati<strong>on</strong><br />

CV estimati<strong>on</strong><br />

calculate H, H_CV, D_CV, D-statistics<br />

store models and statistics as structured<br />

<str<strong>on</strong>g>arrays</str<strong>on</strong>g>(f,c)<br />

end factors<br />

end classes<br />

Loop <strong>on</strong> classes<br />

LV’s corresp<strong>on</strong>ding to minium press<br />

apply the different <str<strong>on</strong>g>classificati<strong>on</strong></str<strong>on</strong>g> rules<br />

calculate SENS, SPEC, Test set assignati<strong>on</strong><br />

Loop <strong>on</strong> Factors<br />

apply different <str<strong>on</strong>g>classificati<strong>on</strong></str<strong>on</strong>g> rules<br />

calculate SENS, SPEC, Test set assignati<strong>on</strong><br />

store SENS, SPEC as 3w-<str<strong>on</strong>g>arrays</str<strong>on</strong>g>(c, …,f)<br />

store test set assignati<strong>on</strong> as structured array<br />

end factors<br />

end classes<br />

store data<br />

SENS = % of samples bel<strong>on</strong>ging to the class correctly recognized<br />

SPEC = % of samples not bel<strong>on</strong>ging to the class correctly refused<br />

Graphical<br />

representati<strong>on</strong><br />

routine<br />

SENS , SPEC<br />

TRICAP 2009<br />

Dr. Marina CocchiMORE chemometrics,<br />

Department of Chemistry-University of Modena

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